|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2124 | hla1155 | HQ2878A | VNG1165 | Hut1311 | rrnAC0257 | Hmu1190 | NP3678A | HVO_2746 | Hbo2479 |
1644 | hla1155 | 2285 | 1440 | 1423 | 1397 | 1367 | 1402 | 1391 | 1496 | 1529 |
1592 | HQ2878A | 1440 | 2215 | 1352 | 1485 | 1377 | 1374 | 1335 | 1351 | 1416 |
1582 | VNG1165 | 1423 | 1352 | 2136 | 1410 | 1394 | 1461 | 1316 | 1437 | 1447 |
1704 | Hut1311 | 1397 | 1485 | 1410 | 2210 | 1585 | 1577 | 1483 | 1429 | 1460 |
1674 | rrnAC0257 | 1367 | 1377 | 1394 | 1585 | 2147 | 1775 | 1430 | 1428 | 1421 |
1708 | Hmu1190 | 1402 | 1374 | 1461 | 1577 | 1775 | 2212 | 1420 | 1483 | 1471 |
1623 | NP3678A | 1391 | 1335 | 1316 | 1483 | 1430 | 1420 | 2059 | 1415 | 1494 |
1688 | HVO_2746 | 1496 | 1351 | 1437 | 1429 | 1428 | 1483 | 1415 | 2158 | 1711 |
1757 | Hbo2479 | 1529 | 1416 | 1447 | 1460 | 1421 | 1471 | 1494 | 1711 | 2183 |
316 symbols consensus MTDD------A-------TG--ARDPDALIRRAGARGDPDQDQHFLVDDRVLDRIPTYLP #oth 12665455555111111152226....1.42...5121133.....1....1..1.3.13 hla1155 :::LSTGAGA::::::::Y:::D::::::A::::E:AN::R:::::::::::::::G::: HQ2878A :::ATSGSDPDSTTPVDL::EDF::::::R::::VS:::NF:::::I::::::::::::L VNG1165 ::A-::::::-:::::::--::P:::::::::::-:PN::F:::::I:::::::::::AD Hut1311 :AGEDAADGPN:::::::V:::G::::::LA:::::::::::::::::::::::::::AT rrnAC0257 ::TT::::::E:::::::::::T::::::V::::K:A:TR::::::::::::::::E:AT Hmu1190 ::T:GPPSEG::::::::D::::::::::VA:::K:A:TR::::::I:::::::::G:AD NP3678A ----::::::-:::::::--::M::::::LV:::V::::ER:::::I:::::::L:G::: HVO_2746 ::S:GSEQVRE:::::::VA:::::::::::::::::N::H::::::::::V:::::::: Hbo2479 ::EPEPDRTET:::::::AAHPP::::R::::::L:::::::::::::::::::::S::: consensus D-DADTSHVLEIGAGTGALTDRLLAVAD------------RVTVVERDPDLAAFLREEFA #oth 2144.23.2..1.1.3.1......422211111111111131111.1.542.41.13..1 hla1155 ::::::::L::::G:A:::::::::AITSSADTDTAPAPGHLS:I:::GTF:D::::::: HQ2878A ::ST::T:I:::::::::::::::::G:::::::::::::T:::I:::AT:::::::::: VNG1165 -:GF:RG:::::::::::::::::S::::::::::::::::::A::::ESY:S::::::: Hut1311 EAGI:LG::::::::N::::::::::::::::::::::::W::A::::::::::::T::: rrnAC0257 :A:I:L:::::::::P:::::::::T:E:::::::::::::::A::::::F::H:::::T Hmu1190 -:QM:R:::::V:::P:::::::::::::::::::::::::::AI:::::F::H:::::: NP3678A ::S:::D::::::G::::::::::D:::::::::::::::::::I::::G::T::TD::: HVO_2746 E:E::R:::::::G:P:V::::::G:::::::::::::::::::::Q:RTF::H::R::: Hbo2479 E::T:::::::V:G::::::::::R:::::::::::::::::::::::TR::E::::::: consensus DAIEAGRLTVIEGDALEVDLPDFTACVSNLPYGASSEIAFRLLPAGKPLVLMFQQEFAER #oth 3212213.2121....212..2112211.....21..13.1...233.122.2.4..11. hla1155 T::DD:L:D:::::::D::::::::::A:::::V::::::::::E:::::::::A::::: HQ2878A VM:DD:::NI::::::::T::A::T:I::::::I::::L:E::::DC::IV:V:R::G:: VNG1165 :::A::D:D:VA::::A::::A::CA:::::::VA::VT:::::::::M:::Y:L::::: Hut1311 ::::::::::::::::::::::Y::SI:::::::::::L::::::::::IA:V:A:::D: rrnAC0257 EEVA:D:::IV::::::::::::::SI:::::::::::::::::EQR::L:::::::::: Hmu1190 :::D:D:::IV:::::D::::E:S:S::::::::::::::::::R::::::::::::::: NP3678A :E::::S:::::::::::P::::::S:::::::V::::::::::EKR::::::::::::: HVO_2746 :EV:SD::::V:::::D::::E:::::::::::I::::S:::::R:::::::::K::G:: Hbo2479 :::::D:::IL::::::I:::E:::::::::::I::::T:::::R:V:::::::K::G:: consensus MAADPGTDEYGRLSVSAQHYADVEVVETVPPEAFDPQPAVESAVVRATPREPDYEVPDEA #oth .1.221212......211..13.121.3..32..2.4.1.3.121.54..3.3.3.4113 hla1155 :V:SA:ES:::::::::::::A::I::R::K:::::::::::::::CL::D:::::G::: HQ2878A ::::::::A::::::::::::T:::::::::T::A:E:::D::LI::E::D:::T:T::T VNG1165 :::::::S:::::::AT::::::SI:::::AA::::::R:::::::V:::D:::V:A::: Hut1311 ::::::S:D::::::T:G:::::::::P::::::S:P:::D::L:::L::::N:T:::DD rrnAC0257 :::::A::D::::::T:G::::::::::::::::::::R:T::L::TM::T:::T::SDD Hmu1190 ::::::S:D::::::T:G::::::I::::::T::::::R:D::I::LR::::::S:::DD NP3678A :::E:::::::::::T:G:::::::::P::K:::S:P:::::::::T:::::P:::::DE HVO_2746 :::EA::S::::::::T:::GE::LC:H::R:::::K:::Q:V:::I:::::E:::D::: Hbo2479 :::ET:::::::::::::::G:::::::::K:::::A:::::V:::V:::A:::::D::: consensus FFLDFVKAVFTQRRKTMRNAIRNTAHISGLDDPDAVVEAADEDLLRKRAGNLSPAAFAAL #oth 1.1311111.......3..11...2..1213111...3.11141123.1.424.34..3. hla1155 :::R::::L:::::::V:::::::G::::::::E:::D::::::::Q:P:D:E:SS:::: HQ2878A :::R::::::::::::V:::::::::::M::T:::::N::::A::SQ:::D:T:SE::E: VNG1165 :::S::::L:::::::T::::::::::::::::::::A:V:D:V:GT:P:S::::T:::: Hut1311 :::G::::::::::::V::G:::::::::::::::::D::::E:::::::D:::TD::E: rrnAC0257 ::M::L::::::::::::::V:::::::::G:::::::::::G:MSA:::K:T::D::T: Hmu1190 ::M::L:G::::::::::::V::::::TD:G::::::D::::S:MG::::E::::T:::: NP3678A L:MRL:R:::::::::::::V:::T::::IE:AE::::::G:::MS:::::VP:E:::R: HVO_2746 ::::::::L:::::::I::G::::::::::S::E:::::::::V:::::::MA::E::E: Hbo2479 ::::::::L:::::::I::G::::::::::E::E:::::::::V:::::::M::E::::: consensus ATLAAEVG---RP--- #oth 152.523211152544 hla1155 :E::R:H::::S:TEV HQ2878A ::I:::K::::K-::: VNG1165 :NV:WG:ETAPG:DPQ Hut1311 :S::H::::::LDSDD rrnAC0257 ::::Y::::::Q:EA: Hmu1190 ::::Y:T::::::GEY NP3678A :AI::::D:::G-::: HVO_2746 :Q:::S::::::-::: Hbo2479 TA::D:H:::::-:::