|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3668 | VNG1493 | HVO_2721 | HQ2893A | hla1786 | Hbo2453 | NP4312A | Hut1362 | rrnAC0797 | Hmu1771 |
2985 | VNG1493 | 3706 | 2739 | 2811 | 2828 | 2814 | 2853 | 2714 | 2731 | 2767 |
3166 | HVO_2721 | 2739 | 3739 | 3037 | 2897 | 3049 | 2941 | 2934 | 2982 | 3044 |
3149 | HQ2893A | 2811 | 3037 | 4942 | 3021 | 3192 | 2909 | 2879 | 2972 | 2964 |
3229 | hla1786 | 2828 | 2897 | 3021 | 3754 | 3151 | 2993 | 2942 | 3003 | 3004 |
3303 | Hbo2453 | 2814 | 3049 | 3192 | 3151 | 3927 | 2978 | 2943 | 3039 | 3066 |
3236 | NP4312A | 2853 | 2941 | 2909 | 2993 | 2978 | 3745 | 2954 | 3064 | 3055 |
3133 | Hut1362 | 2714 | 2934 | 2879 | 2942 | 2943 | 2954 | 3595 | 3036 | 3052 |
3277 | rrnAC0797 | 2731 | 2982 | 2972 | 3003 | 3039 | 3064 | 3036 | 3631 | 3233 |
3265 | Hmu1771 | 2767 | 3044 | 2964 | 3004 | 3066 | 3055 | 3052 | 3233 | 3641 |
659 symbols consensus ---------------------------------M--GRD--------------------- #oth 111111111111111111111111111111111265124454444211111111111111 VNG1493 :::::::::::::::::::::::::::::::::-MS:GPADGPMSD:::::::::::::: HVO_2721 ::::::::::::::::::::::::::::::::::VT:::DSHHHIG:::::::::::::: HQ2893A MSDGRDVTPTPGRAIESGTESKSETKPDANPDAETG:GGDAGADAGAHKTKELDSEVLSQ hla1786 ::::::::::::::::::::::::::::::::::QA:G:HTAD::::::::::::::::: Hbo2453 ::::::::::::::::::::::::::::::::::SD:::AQTPTPG:::::::::::::: NP4312A ::::::::::::::::::::::::::::::::::PD::HSD::::::::::::::::::: Hut1362 :::::::::::::::::::::::::::::::::-::---::::::::::::::::::::: rrnAC0797 :::::::::::::::::::::::::::::::::-::---::::::::::::::::::::: Hmu1771 :::::::::::::::::::::::::::::::::-::---::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1493 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2721 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2893A LSADRDDISTEDKIETKTKTKIKAGNESDHNAGNNHSNAIDQTTDLKSASSLNSGTSVPI hla1786 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2453 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4312A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1362 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0797 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1771 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------GPTEKCGVVGVSLADRDAARPLYYSLYALQHRGQESA #oth 11111111121222212222221323.......21.62.3..1.1..1............ VNG1493 :::::::::::::::::::::::H:::::::::A::SA::::L:T::A:::::::::::: HVO_2721 ::::::::::::::::::::::::L:::::::::A:GG:::::::::::::::::::::: HQ2893A SQPSKISSSEDKQQTQRQTNSGS:::::::::::A:TG:R:::::::::::::::::::: hla1786 :::::::::::::::::::::::E:R:::::::::::::E:::::::A:::::::::::: Hbo2453 :::::::::RDAGRQQPTADDLS:::::::::::A::::A:::::::::::::::::::: NP4312A :::::::::::::::::::::::E::::::::::::DG:::::::::A:::::::::::: Hut1362 :::::::::::::::::::::::-MD:::::::I::Q::E:::::::::::::::::::: rrnAC0797 :::::::::::::::::::::::-MH:::::::I::E::::::::::::::::::::::: Hmu1771 :::::::::::::::::::::::-MH:::::::IA:Q::::::::::::::::::::::: consensus GIVTHDGFQQHSHVEMGLVGDAFDEGDLDSLNGSTGIGHVRYPTAGSVDSSCAQPFSVSF #oth ...1......11.122.....1.233.134.5.531........1.21221.....2... VNG1493 :::A:::::::Q::G::::::::::A:I:A:H::AA:::::::::::::K:::::::::: HVO_2721 ::::::::::::::Q::::::::GAD:::G:K:EA:::::::::::D:SK::::::A::: HQ2893A :::::::::::::::::::::::::S::NT:A:G::::::::::S:G:NAC::::::::: hla1786 :::::::::::::::R::::::::::::E::S:G:::::::::::::L:K:::::::::: Hbo2453 :::::::::::::::T:::::V:G:S:::::T:T::::::::::S:GL::C::::::::: NP4312A :::::::::::::::::::::::E:::::::::P::::::::::::::N::::::::::: Hut1362 :::::::::::::IG::::::V::S::I:D:T:AV:::::::::::::::::::::T::: rrnAC0797 ::::::::::Y:::::::::::::P:::EA::::N:::::::::::::NAC::::::::: Hmu1771 :::::::::::::::::::::V::PD::A:::::N:::::::::::::::C::::::::: consensus KSGSLGLSHNGNLVNADEIRDELAALGHAFTSDGDTEVIAHDLARNLLEEDLVRAVKRTM #oth .1.1.1.1.........12131.133......1........1......11..11..12.. VNG1493 :G:A::::::::::::::L:AD:::S::::::::::::::::::::::DA:::D::E::: HVO_2721 :::::::A::::::::::L::::ENF::::::T::::::::::::::::::::::::::: HQ2893A :::::::::::::::::::::::ES::::::::::::::::E:::::::A:::::::Q:: hla1786 ::::::::::::::::::V:E::::A:::::::::::::::::::::::::::::::H:: Hbo2453 :::::::A:::::::::::::::ED::::::::::::::::::::::::::::::::H:: NP4312A ::::::::::::::::::L:QD:::S::::::::::::::::::::::::::I::::::: Hut1362 :::::A:::::::::::DV:::::N::::::::::::::::::::::::A:::::::::: rrnAC0797 :::::::::::::::::::G::::D::::::::::::::::::::::::::::::::::: Hmu1771 ::::::::::::::::::::::::NF:::::::::::::::::::::::A:::::::::: consensus NRIHGSYSLTIMHDDTVLGVRDPEGNRPLCIGELDDGYVLASESAAIDTLDGELVRDVRP #oth 4......1.1.3..1..11....3.....11.2221..121.......111.121...2. VNG1493 E::::::::::::::::::::::R:::::VL:TVE::::I:::::::::IG:DV:::::: HVO_2721 E::::::A::::::E:::::::::::::::::KV::::::::::::::::::::::::K: HQ2893A E::::::A::::::E:::A::::::::::::::VE::::V:::::::::::::::::::: hla1786 :::::::::A:A:::::::::::L::::::L:KI:G::::::::::::::::::I::::: Hbo2453 G:::::::::::::E:::A::::Q::::::::K::::::V::::::::::::D::::::: NP4312A :::::::::::T:::::::::::Q::::::::::::::I:::::::::V::::F::::N: Hut1362 K::::::::::T::::::::::::::::::::::E::::::::::::::::::VI::::: rrnAC0797 ::::::::::::::E::::::::Q::::::::::K:::::::::::::::::::I:::K: Hmu1771 S::::::A:::S:::::M::::::::::::::K:::::::T:::::::::::::I:::K: consensus GELVVLDDDGTGFDSYQLVERENTAHCFFEHVYFARPDSVIDDNLVYEVRRELGRKLWEE #oth ..11..33..3.1221..114241.1....11.......31134...12..4...1.13. VNG1493 ::AI:::::::::SAH:::D:DT:::::::Y::::::::::::E:::::::N:::Q::H: HVO_2721 ::::::EP::S::::::::::D:::::::::I::::::::MN:T::::A::G::::::D: HQ2893A :::::::A::S::E::::TD:Q:::::::::::::::::::NET::::A::N::::::A: hla1786 ::::::EP::::Y:T:::::::S:::::::::::::::::::E::::::::A:::::::: Hbo2453 ::::::ES::S:::::::::Q:H::::::::::::::::::::T::::A::D:::::::: NP4312A ::::::::::G:Y::::::DA::S:::::::::::::::R::SK:::D:::::::::::: Hut1362 ::::::QP::E:Y:T:::::HDR::::::::::::::::D::GQ:::DT::::::::YD: rrnAC0797 ::::::HA::::Y:T:::::P::::N:::::::::::::T::E::::::::::::::::: Hmu1771 ::::::H:::::::::::::Q::::::::::::::::::T::::::::::::::::::D: consensus SGVESDVVMPVPDSGRAFASGYAEAAQEDGAD-------------IEFAEGLMKNRYVGR #oth 4.111...2..........1...2..423332122112111311321............. VNG1493 T:::::::V::::::::::::::D::T:::S::::::::::::::V:::::::::::::: HVO_2721 N::DT::::::::::::::::::::::::D:T:::::::::::::A:::::::::::::: HQ2893A Q:::T::::::::::::::::::D::N:TT::GDIRETTSTNDDA::::::::::::::: hla1786 :::::::::::::::::::::::D::G:TT::GEPRED:::GDDG:A::::::::::::: Hbo2453 :::::::::::::::::::T::::::N:TT::GDPRE::::SDDSV:::::::::::::: NP4312A A:::::::V:::::::::::::::::::::TN:::::::::::::V:::::::::::::: Hut1362 ::IDT:::L::::::::::::::A::E----::::::::::::::V:::::::::::::: rrnAC0797 ::::::::L::::::::::::::::::D::S::::::::::::::::::::::::::::: Hmu1771 :::D::::L:::::::::::::::::::S::::::::::::::::::::::::::::::: consensus TFIMPTQDERERAVRLKLNPIKSTIEGKSVTIIDDSIVRGTTSTQLVQLLRDAGAEEVHV #oth .......11............1211..21..2...........3..13.1211..21112 VNG1493 :::::::EA:::::::::::::::V::Q:::::::::::::::S:::D:V:::::T:::: HVO_2721 ::::::::::::::::::::::::V::::::L:::::::::::N::::::Y::::T:::M HQ2893A ::::::::::::::::::::::::V::R:::::::::::::::R:::::::::::S:::: hla1786 :::::::::::::::::::::R::V::::::::::::::::::::::E:V:E:::::::L Hbo2453 :::::::::::::::::::::::::::R:::::::::::::::R:::::V:::::::::: NP4312A ::::::::A:::::::::::::DV::::T::V:::::::::::::::E::K:V:::S::M Hut1362 :::::::::::::::::::::RN::::::::L::::::::::::::ID:::::::::I:L rrnAC0797 ::::::::::::::::::::::::::::::::::::::::::::::IK::K:::::::N: Hmu1771 ::::::::::::::::::::::::::::T:::::::::::::::::IE::K::::::::: consensus RIGAPPIIAPCYMGIDMATRDELIAADRSVEEIRDEIGADSLSYLSIDAVAEALGESRAD #oth ...1.2.21...1..1..1.1....223231.112314....1..122112331223231 VNG1493 :::::Q:Q::::F:::::::E:::::::TAD::AA::::::::::PLS::TA:I:K:E:: HVO_2721 :::::::V:::::::N::::E::::S:K::::V::T:D::::G:::::S:::V:EK:QS: HQ2893A :::::Q::::::::::::S::::::::K:T::::A::D::::G:::V::::DV:::H:S: hla1786 :::::A::::::F:::::::E::::::A:T::::EKV:::::::::V::::D:::::::: Hbo2453 ::::::::::::::::::::E::::S:KTT:::::D:::::::::::::I:A:::::::: NP4312A :::::A:V::::::::::S:::::::G:D:::::E::A::::::::V::::::::::ED: Hut1362 :::S:::V::::::::::S::::::G::::::::ET:::::::::::::IS:T::TD:D: rrnAC0797 :::::::V::::::::::S::::::GNQ:::::::::E:::::::::::I::T:DK::T: Hmu1771 :::::A::S::::::::::::::::::::I:::::K:Q::::::::VE:I:QS:DKGQDE consensus LCLGCVTGEYPYDIDGEATDRDVERPVIGD-----------------QASPA-----DD #oth 1.1....12..1.111.31..2251151351111111111111111154352221222. VNG1493 M:A:::::A::::V::::::::A:::TV--:::::::::::::::::-TPSS::::::: HVO_2721 :::::::::::::::::E:::::S:::V:A:::::::::::::::::E:PLS:::::-: HQ2893A ::::::::S::::::N:DS::::T::::AGPDTGADATNQKNESKQEA::DGEPARA:: hla1786 :::::::::::F:VE::E::::I:--GVAS:::::::::::::::::GV:::::::::: Hbo2453 :::::::S:::::::::P:::S::::S:S::::::::::::::::::ETL::::::::: NP4312A ::::::::::::::E::P::::IA::EV:G:::::::::::::::::DQPE:GVAGS:: Hut1362 :::::::::::::::::::::EIA::::-::::::::::::::::::G::V::::::E: rrnAC0797 ::::::::::::::E::::::::V::D::T::::::::::::::::::S:::::::::: Hmu1771 ::::::::::::::E::E:::::D::::::::::::::::::::::::TME::::::::