|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1123 | NP5318A | hla2661 | VNG0283 | Hut1892 | HQ1177A | rrnAC1867 | Hmu0842 | HVO_0766 | Hbo0766 |
613 | NP5318A | 1143 | 471 | 419 | 439 | 499 | 534 | 476 | 503 | 507 |
718 | hla2661 | 471 | 1113 | 438 | 501 | 620 | 535 | 511 | 644 | 646 |
582 | VNG0283 | 419 | 438 | 1092 | 510 | 462 | 468 | 560 | 482 | 507 |
718 | Hut1892 | 439 | 501 | 510 | 1476 | 620 | 532 | 558 | 571 | 665 |
781 | HQ1177A | 499 | 620 | 462 | 620 | 1288 | 595 | 565 | 681 | 736 |
706 | rrnAC1867 | 534 | 535 | 468 | 532 | 595 | 1926 | 715 | 581 | 638 |
678 | Hmu0842 | 476 | 511 | 560 | 558 | 565 | 715 | 955 | 559 | 597 |
854 | HVO_0766 | 503 | 644 | 482 | 571 | 681 | 581 | 559 | 1209 | 775 |
893 | Hbo0766 | 507 | 646 | 507 | 665 | 736 | 638 | 597 | 775 | 1424 |
273 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP5318A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2661 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0283 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1892 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1177A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1867 MLGLARRGNPGPVRKGFVPDGPTKYYASHYGGRLHGRQLRTRHVRDALHVRYAGRCRTRG Hmu0842 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0766 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0766 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---------------MNRLREFGESAGRAVLERVGRAVSRVQERKPLPYDLLESDDAYLV #oth 1111111111111113354424232335433132..12132..231.34.1...111..3 NP5318A :::::::::::::::--MI:DL:::I::T::DGI:::::::::QRA:SA::::::E:::A hla2661 :::::::::::::::VSGFV:T:R:VV:RA::::::GW:KM:::R::S:::::::::::: VNG0283 :::::::::::::::::G-:::ADCV:AGL:::A:::AG::::NA:::V:V:::::E::L Hut1892 :::::::::::::::::Q::::T:EI:ET:I:S::::::KA:::T::LV::::::::::A HQ1177A ::::::::::::::::S::T:L::::AQT::D::::G::E::::T::::::::::E:::I rrnAC1867 VLLPVLWRNGLPRRSGTMM:DI:S:ISD:IF:NI:::AG::::N:::AS::::::::::: Hmu0842 :::::::::::::::---MFD:AR:L:D:IV:N::::AG:::::T:::A::::::::::: HVO_0766 ::::::::::::::::SD::KY::::AN::::::::G::QM::::::AH:::::E::::: Hbo0766 :::::::::::::::::::K::::::A:S::::I::G::::::Q:::::::::::::::: consensus VFDAPGARASDVQVRFLDGTVEVRIDRFRDFHEGFEMRFPGRGLSLDGSVTLPDDAAVDA #oth 1..1.13553.22.22423413112..1.313311.121....22.3.4131.42.3142 NP5318A :::::::MPE:ID:T:D:::LD:::::V:G::GDY::::::::QT:H:R:S:::G:V:-: hla2661 ::::::V:GE:LN:T:::H::::EL::::::YD:Y::L:::::V::S::AD::R::N:TP VNG0283 :::T:::D:::ID:TYEGDS:H::V::::E:DAD::VV::::::T:E:HA:::AN:V:N: Hut1892 :::::D:TT:::::QLSGR:::::L::::EPR::::::::::::T:::H::::P:::I:G HQ1177A I:::::IEQT::::Q::::K::::L::::::Y:D::::::::::::::::S::::::::P rrnAC1867 ::::::TT:::I:::YV:DR:::::::::::YD:::::Y:::::A::::::::S:::::P Hmu0842 ::::::VE:A:L::QYV:DR::::V::::P::::::::Y::::::::::::::A::V:E: HVO_0766 :::::::::E:::::::::E::I:::::::::::Y:::::::::T:S:TA:I:S::S:E: Hbo0766 ::::::VQR::::::::N:E:Q::::::::::::::::::::::::::GAE::::::::: consensus EGANATLTANGTLQVRIPKADRA-ADVAVTEEDDEADDEA-------------------- #oth 4415.11452...3152..42542524534555456553511111112222221122221 NP5318A DE:D::V::H:::EILL::::GED:NGRDANGGG:GS:SD:::::::::::::::::::: hla2661 Q:::::::R::::::K:::K:D::R::::V:::::ES:ST:::::::::::::::::::: VNG0283 DAGR:E:NED:::H:FL::HGT:E::IH::AT::SD:ES::::::::::::::::::::: Hut1892 :::T:::QE::::::::::R:GG:TT::::D:NEHDEP::PTSEIETDSENGGDSESEGD HQ1177A :R:::::GR:::::I:L::DG:H:QT:::S:A:ENNEHDE:::::::::::::::::::: rrnAC1867 :T:Q:::KS::::H::V::::TD:H:EDEATDVGV:T:DS:::::::GT::::::::::: Hmu0842 :A:S:::KDD:::H:YV::::E::::--------------:::::::::::::::::::: HVO_0766 AEGT::VGKH::::I::::DE:::S:I:::::E::::G:::::::::::::::::::::: Hbo0766 T::S:::::::::R:E:::DEQ::H::V::D:EN:HAE:::::::::DSRADSDSTAGSD consensus --------------------D-GD---DDA--- #oth 233331334233343443553543555335323 NP5318A :::::::::::::::::::::S:KAER::S::: hla2661 ::::::::::::::::::::-:--:::::T::: VNG0283 ::::::::::::::::::::-:--:::---::: Hut1892 GDGEGDGDSEGDSGSESEDGGDS:GDG:AETEA HQ1177A :::::::MIDSGDSDASTANNTD:ANH:PDTDS rrnAC1867 :AEVTDADADSETADVEDVT:AA:EGE::DA:: Hmu0842 ::::::::::::::::::::-:--:::---::: HVO_0766 ::::::::::::DTESDDEV:F::VDDQ::::: Hbo0766 PTADSDSAVDADSTDVADHAGD:EDADE::LDN