|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2118 | VNG1797 | hla0971 | HVO_2338 | Hbo2020 | HQ3322A | Hut0744 | NP4524A | rrnAC3348 | Hmu2220 |
1488 | VNG1797 | 2181 | 1411 | 1377 | 1412 | 1353 | 1367 | 1439 | 1348 | 1314 |
1729 | hla0971 | 1411 | 2130 | 1606 | 1593 | 1560 | 1511 | 1603 | 1575 | 1535 |
1826 | HVO_2338 | 1377 | 1606 | 2136 | 1688 | 1658 | 1554 | 1623 | 1618 | 1581 |
1774 | Hbo2020 | 1412 | 1593 | 1688 | 2127 | 1712 | 1569 | 1619 | 1580 | 1542 |
1747 | HQ3322A | 1353 | 1560 | 1658 | 1712 | 2122 | 1542 | 1555 | 1513 | 1485 |
1769 | Hut0744 | 1367 | 1511 | 1554 | 1569 | 1542 | 2114 | 1562 | 1674 | 1620 |
1762 | NP4524A | 1439 | 1603 | 1623 | 1619 | 1555 | 1562 | 2103 | 1673 | 1652 |
1767 | rrnAC3348 | 1348 | 1575 | 1618 | 1580 | 1513 | 1674 | 1673 | 2364 | 1817 |
1759 | Hmu2220 | 1314 | 1535 | 1581 | 1542 | 1485 | 1620 | 1652 | 1817 | 2130 |
331 symbols consensus -----------------------------MR--TVRAPATSANLGSGFDVFGVALDRPAD #oth 11111111111111111111111111111.321.1.................2..31... VNG1797 ::::::::::::::::::::::::::::::VV:::::::::::::::::::::::SK::: hla0971 ::::::::::::::::::::::::::::::V:::::::::::::::::::::A::T:::: HVO_2338 ::::::::::::::::::::::::::::::V::::::::::::::::::::::::::::: Hbo2020 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3322A :::::::::::::::::::::::::::::::ME::::::::::::::::::::::::::: Hut0744 ::::::::::::::::::::::::::::::::::A:::::::::::::::::I::S:::: NP4524A ::::::::::::::::::::::::::::::I:::::::::::::::::::::A::E:::: rrnAC3348 MPLGRVLSTGKRPQCRFATFLPTLLKFAG:L::::::::::::::::::::::::E:::: Hmu2220 ::::::::::::::::::::::::::::::L::::::::::::::::::::::::E:::: consensus VVRVEKADRTTIEVTGVGSQYIPEDPEKNTVGAVAEALDAPAHIQIDKGVRPASGLGSSA #oth 122211.431..3...1.1211.1..43.11.1.13......3.3.1..1..1....... VNG1797 :::::R::T:::T:::A:A::V:T::QE::A:V::A::::::T:H:N:::::S::::::: hla0971 ::T::::AE:::::::::A:::::::K:::::::V:::::::R:H::::::::::::::: HVO_2338 I:H::R:::::::::::::::::T::DR:V::::::::::::::R:::::::S::::::: Hbo2020 :I:::::S:::::::::::::::::::::V::::::::::::::::::::::S::::::: HQ3322A I::::R::K:::::::::::::::::HS:V::::::::::::Q:::::::::S::::::: Hut0744 :::::R::::::::::A:::F::::::::::::::::::::::::::::I:::::::::: NP4524A IL:I:::N::::R::::::K::::::::::::::::::::::::E::::::::::::::: rrnAC3348 :::L:::::V::D:::A:::::::::D::::::::D::::::R::::::::::::::::: Hmu2220 ::::S::E::::::::A::E:::::::::::::::K::::::::E::::I:::::::::: consensus ASAAAAAVALNELYDRGLSREELVPIAAEGEAVVSGDAHADNVAPAILGGFTIATDDGVT #oth ..1.1.111.14..1.131141..12..2...21..3..3.....111....12143222 VNG1797 ::::::T:::A:::::P:DDDA::RA::Q:::AA::V::::::::::::::::VRE::IE hla0971 ::::G::::::R::::::::S:::::::::::::::V::S:::::S::::::VT:SE:TH HVO_2338 ::S::::::::::::::::::::::V::::::::::E:::::::::L:::::V:::E::: Hbo2020 ::::G::L:::A:::::Y::S::::A::::::::::E::V::::::L:::::V:RE:E:: HQ3322A :::::::::::G::::::::T:::::::::::I:::E::V::::::L:::::::RNST:: Hut0744 :::::::::::D:::::K::K:::::::K::::::::::D:::::::::::::::P:::: NP4524A ::::::::G:::::::::::::::::::::::::::A::::::::S:M::::V:RE:::: rrnAC3348 ::::::::G::::::::Y::::::::::K::::::::::D:::::S:M::::::::K::: Hmu2220 ::::::::G:::::G::H:::A::::::K::::::::::D:::::S:M:::::::::::: consensus QVDADIPLVACLPEIAVSTRDARRVVPERASMEDLVETVGNAATLTVGMCRDDPALVGAG #oth 31.12121111..1221......3...35262143.31.12..2.14..3231131..2. VNG1797 H:::SLA:AV::::TT:::::::G::::S:A::AV:S::ES:::::L:::EN::QR::R: hla0971 A:::S::::V:::DV:::::::::::::T:::D::::::::::::AI::::S::D::::: HVO_2338 T::::::::::::::::::::::::::SD::I::M:H:::R::::A:::::R:AD::::: Hbo2020 T::T::S:::::::::I::::::::::T::D:::V:H:::S::::A:::::S::E:::R: HQ3322A T::TT::::::::::::::::::::::DSIT::EA:H:::S:::::::::QSN::::::: Hut0744 :I:T::SI:VT::::V:::::::K:::TETTV:K::::::::::::A::Y::::::::R: NP4524A ::::S::::::::::V:::::::G::::A:P::AV:DV:::::::A:::A::::::::R: rrnAC3348 :::::::::::::D:V:::::::N::::T:RVDQM::::::::S::T::H::::E:::Q: Hmu2220 :::::::::::::D:V::::::::::::::GVDQ:::::::::R::T::H::::D::::: consensus MDDRVVTPARAKLIDGYEAVREAALAAGATGVTISGAGPAVLAVCRAGDRRAVAAAMLDA #oth 14162...1.12.22..36114..34.......1..1..312111554212411311213 VNG1797 VE:AL::::::R:M:::::ASA::RD::::::::::S::G:V::::RR::KR::::LV:G hla0971 :S:P::::E::R::T::DE::A::FD:::::::V::::::I:::::D:Q::G:::::::: HVO_2338 ::::::::::::::N::HD::::::::::::::V:::::S::G::Q:A::TR::G:::E: Hbo2020 ::E:L:::::SE::T:::N::T:::D:::::::V:::::S:::A:YPD:::Q:::::V:G HQ3322A ::EH:::::::E:VT::DT::::::T:::::::V::::::I::::K:ER::::::::I:: Hut0744 :E:D:::::::::::::D:::D::::::::::::::::::::::T:SR:Q:S::N::::T NP4524A :E:SI:::E::E::N:::T::S::EN:::::::::::::T:I:A:HR:::T:I:S::::: rrnAC3348 :H:T::::::::::::::Q::::::::::::::::::::T:I:A:AEE:::QI:ST:::: Hmu2220 :Y:SI::::::::::::AG::::::E:::::::::::::T:I:A:HE::Q::IGS::IER consensus FDEAGVEARAYQTRIGRGATVF--------- #oth .442112121.1.2114.2322231111111 VNG1797 ::S:::A:S:::::::D:::RLAADGDDRAP hla0971 :SD::IDS::::::::::S::LEE::::::: HVO_2338 ::::D:A::::K::V::::E::ES::::::: Hbo2020 ::D:::::::::::V:G::V::::::::::: HQ3322A :ET:D::::::::CVSA:::L:::::::::: Hut0744 ::AR:ID:::::::::N:TRLY::::::::: NP4524A :S:::::::::K:E:::::EL:::::::::: rrnAC3348 :G:R::D::V::::::G::E::::::::::: Hmu2220 :A:ED:::QV::::::A::::::::::::::