Home |  Text search
[J] (RplC) COG0087 Ribosomal protein L3
9 genomes BUD0579 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1689

rrnAC1611

HVO_2564

Hbo2289

Hmu2038

Hut3009

hla0834

NP4854A

HQ2842A

Pairwise sequence scores
Consensus score2656 HQ2842A hla0834 HVO_2564 Hbo2289 VNG1689 NP4854A Hut3009 rrnAC1611 Hmu2038
2232HQ2842A 2620 2102 2146 2139 1987 2027 1984 2081 2014
2330hla0834 2102 2643 2306 2178 2029 2131 2112 2075 2127
2364HVO_2564 2146 2306 2629 2251 2006 2075 2068 2125 2115
2273Hbo2289 2139 2178 2251 2539 1943 2054 1969 2021 2040
2216VNG1689 1987 2029 2006 1943 2629 2126 2018 2091 2089
2297NP4854A 2027 2131 2075 2054 2126 2630 2260 2214 2229
2286Hut3009 1984 2112 2068 1969 2018 2260 2661 2310 2297
2333rrnAC1611 2081 2075 2125 2021 2091 2214 2310 2679 2402
2348Hmu2038 2014 2127 2115 2040 2089 2229 2297 2402 2657

338 symbols
consensus       MPQPSRPRKGSMGFSPRKRAASEVPRFNSWPDDDGQPGLQGFAGYKAGMTHVVMVNDEAN
#oth            111121111111111..3.143.1..12..1211.3211..........11.3311.111
HQ2842A         ::::::::::::::::::::E:::::IR::ASN::A::V:::::::::::Q:L:::::::
hla0834         :::::::::::L:YG::T::DR::::IR:::::::A:A::::::::::::::::::::::
HVO_2564        ::::::::::::::::::::VK::::IK:::S:::S:A::::::::::::::M::::::D
Hbo2289         -----------:AY:::Q:::K::::IR:::::::S::::::::::::::Q:M:::::::
VNG1689         ::::N:::::::::::::::E::::::::::A:::EV::::::::::::::::L:D:K::
NP4854A         :::::::::::::::::S:::::::::::::::E:::::::::::::::S:::AI:::P:
Hut3009         :::::::::::L:YG::T::T::T:::::::::E::::V::::::::::S:::VI:::P:
rrnAC1611       :::::::::::L::G::::ST::T:::::::S::::::V::::::::::::::L::::P:
Hmu2038         :::::::::::L:YG::T:::N:T:::::::S::::A:::::::::::::::TL::::P:

consensus       SPREGMEETVPVTVVETPPMRAVALRAYEDTPYGKKPLTEVWADEFHEELDRTLDLPAED
#oth            1.2..1.12.....1....11.1.1.1..1....51.21...2412233.1.3111.423
HQ2842A         ::::::::A:::::::::::::::::::::::::S:::::::GR::DTS:E::::::N::
hla0834         :::::::TS:::::::::::Y::::::::Q:::::::VE::::T::::::::A:::::::
HVO_2564        ::H:::::S::::::::::::::::::::Q::::M::Q:::::G:::D::::V:::::::
Hbo2289         ::::::::A:::::::::::::::V:::::::::A::::::::S::V:N::::::::S::
VNG1689         A:T::::T::::::::::::::A:V:L:::::::::::::::::DT::S:::::SV:D:-
NP4854A         :::::Q::::::::::::::::::V::::::::::R::::::T::V::D:E:S:SV:E:Q
Hut3009         ::::::::::::::::::::::::::::::::::LR::::::T:::::D:::AI:::::Q
rrnAC1611       ::::::::::::::I:::::::::::::::::::QR::::::T::::S:::::::V:EDH
Hmu2038         :::::::::::::::::::V::::V::::::::::R::::::T::::S::::A::::EGH

consensus       TFDADADQLRDALDAGDIDDVRVITHTVPGELANVPKKKPDVMETRVGGGSLSDRLDFAL
#oth            3424223321323121322.2.11...1.343421..13...........1251.41111
HQ2842A         ::ED::AA:::DAET:::::::L::::L:AGMR:I:::T:::::::::::T:T::VE:G:
hla0834         ::EE:::E::AL::E:AV:::::::::::S::::::::::::::::::::::EE:V::G:
HVO_2564        :::S:::A::E:VE::EV::L::::::::S:::::::::::::::::::::MVE:A::::
Hbo2289         ::EE:::D::A:VE::EV::I::::::::ASMK:I:::::::::::::::::QE:S::::
VNG1689         --GG:T:E:IE:::TEE:A:I:::::::::DT:G::::N:::::::::::T:A:::E::A
NP4854A         S-GDIEGDI:T:::E:ALA:::::::::::A:SS::::E::::::::::::::::V::::
Hut3009         DR:GAEA:I:::::::RLG:::L:::::::D:PS:::N::::::::::::::A:::EHG:
rrnAC1611       DP::AEE:I:::HE:::LG:L:L::::::DAVPS:::::::::::::::::V:::::H::
Hmu2038         DA::AEE:V:::::::::A::::V:::::D:::::::::::::::::::::::::FEH::

consensus       DLVADGGEHAMSDVFRAGEYADAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNL
#oth            11131..21333.1....112.2111............1.............1.......
HQ2842A         ::IS:::::EI::I::::::L:::::::::::::::::F:::::::::::::Y:::::::
hla0834         ::::E::A:EFG::::::Q:T:VS:I::::::::::::::::::::::::::::::::::
HVO_2564        ::::E::::E::::::::::L:::::::::::::::::::::::::::::::::::::::
Hbo2289         :::EE::::S::::::::::L:::::::::::::::::::::::::::::::::::::::
VNG1689         ::IE:::V::FG:::::::FT::::I::::::::::::::::::::::::::::::::::
NP4854A         :::D:::::TVT::::::::T:V::I::::::::::::::::::::::::::::::::::
Hut3009         E:::::::Y::T::::::::::V:::::::::::::::::::::::::::::::::::::
rrnAC1611       :I:E:::::::N:I::::::::V:::::::::::::::::::::::::::::::::::::
Hmu2038         E::D:::::::N::::::::::I:A:::::::::::::::::::::::::::::::::::

consensus       GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDDATVDGGFVNYGEVDGPYALVKG
#oth            ..............1................12122.12111...11....1.3.1.1..
HQ2842A         :::::::::::::::::::::::::::::::E::N::EP:::::::G::::::::::I::
hla0834         ::::::::::::::::::::::::::::::::F:E::::S:::::::::::::E:::I::
HVO_2564        ::::::::::::::L:::::::::::::::::L:E::::S:E:::::::::::S:::I::
Hbo2289         ::::::::::::::L:::::::::::::::::L:::::::::::::G:::::::::::::
VNG1689         :::::::::::::::::::::::::::::::::N:::EP:P::::P:::::::::T::::
NP4854A         ::::::::::::::::::::::::::::::::L::-::VSP:::::::::::::::::::
Hut3009         ::::::::::::::::::::::::::::::::F::E::V:P::::::::::E:N:::I::
rrnAC1611       ::::::::::::::::::::::::::::::::::E::EP::::::::::::::::T::::
Hmu2038         :::::::::::::::::::::::::::::::::::::::S:::::::::::::::T::::

consensus       SLPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSTASNQG
#oth            .2...22..2.1.1.1..211........1..12....
HQ2842A         ::::::Q::L:::T::::S:::::::::::::::::::
hla0834         :::::::::I:::::I::::::::::::::::::::::
HVO_2564        :::::N:::L:::::I::::::::::::::::::::::
Hbo2289         :::::::::L:::::I:::::::::::::F::::::::
VNG1689         :V:::EQ::::::::::::ES:::::::::::::::::
NP4854A         :V::::::::::::::::G:::::::::::::::::::
Hut3009         :I::::S::::L:::::::::::::::::::::E::::
rrnAC1611       :V::::::::::::::::::::::::::::::NE::::
Hmu2038         :V::::Q::::::::::::::::::::::F:::Q::::