[J] (RpsC) COG0092 Ribosomal protein S3 9 genomes BUD0154 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1697 rrnAC1605 HVO_2558 Hbo2295 Hmu2032 Hut3015 hla0840 NP4866A HQ2836A

Pairwise sequence scores
Consensus score	2289	VNG1697	NP4866A	Hut3015	rrnAC1605	Hmu2032	HVO_2558	HQ2836A	hla0840	Hbo2295
1646	VNG1697	2251	1495	1545	1581	1515	1437	1490	1545	1505
1741	NP4866A	1495	2257	1660	1630	1643	1499	1520	1534	1548
1837	Hut3015	1545	1660	2422	1800	1819	1575	1547	1541	1621
1840	rrnAC1605	1581	1630	1800	2264	1906	1623	1605	1578	1629
1780	Hmu2032	1515	1643	1819	1906	2365	1564	1516	1526	1575
1847	HVO_2558	1437	1499	1575	1623	1564	2252	1718	1717	1803
1889	HQ2836A	1490	1520	1547	1605	1516	1718	2407	1823	1864
1878	hla0840	1545	1534	1541	1578	1526	1717	1823	2330	1876
1941	Hbo2295	1505	1548	1621	1629	1575	1803	1864	1876	2293

350 symbols
consensus       MADEHQFIEDGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK
#oth            ....21..22.11.1..1...21..2.......11.1....1..................
VNG1697         ::::LE:::Q:::::::::::::::A:::::::EL:P::::M::::::::::::::::::
NP4866A         ::::::::H:::::T::::::S:::S:::::::E::::::::::::::::::::::::::
Hut3015         ::::L:::Q::I::T::::::ED:::::::::::::::::::::::::::::::::::::
rrnAC1605       ::::Q:::::::::T:::::::::::::::::::::::::::::::::::::::::::::
Hmu2032         ::::Q:::::::::T:::::::D:::::::::::::::::::::::::::::::::::::
HVO_2558        :::::::::N::::::::::::::::::::::::::::::::::::::::::::::::::
HQ2836A         :::::::::N::::::::::::D:::::::::::::::::::::::::::::::::::::
hla0840         ::::::::::::R::::N::::D:::::::::::::::::::::::::::::::::::::
Hbo2295         :::::::::N::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       NIRKITTELEERFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRI
#oth            ....1.23..21.211...1.....1......1......1....................
VNG1697         :::::::Q:::::D:::::::::::E::::::Q:::::::::::::::::::::::::::
NP4866A         :::::::T:::E:G:::::V::::::::::::Q:::::::::::::::::::::::::::
Hut3015         :::::::T:::E:G:::::V:::::E::::::::::::::::::::::::::::::::::
rrnAC1605       ::::::::::D::::D:::V::::::::::::::::::::::::::::::::::::::::
Hmu2032         :::::::T:::E:G:::::V:::::::::::::::::::G::::::::::::::::::::
HVO_2558        ::::V:R::::::::D::::::::::::::::::::::::::::::::::::::::::::
HQ2836A         ::::V:R:::D::::D::::::::::::::::::::::::::::::::::::::::::::
hla0840         ::::::::::D::DMD::::::::::::::::Q:::::::::::::::::::::::::::
Hbo2295         ::::V:KA::T:::::::::::::::::::::::::::::::::::::::::::::::::

consensus       MESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGVAVMKLGTIGVTV
#oth            111..1....1.......1.1.........1.......131..2.2.1..........4.
VNG1697         ::::::::::::::::::N:G::::::::::::::::::::::H:K::::::::::::N:
NP4866A         ::::::::::I::::::::::::::::::::::::::::S:::S:V:T::::::::::Q:
Hut3015         :::::K:::::::::::::::::::::::::::::::::D:::H::::::::::::::D:
rrnAC1605       ::::::::::::::::::::::::::::::V::::::::::::S:V::::::::::::R:
Hmu2032         ::A::K:::::::::::::::::::::::::::::::::N:::S:V::::::::::::R:
HVO_2558        :DA:::::::::::::::::::::::::::::::::::Q:::::::::::::::::::::
HQ2836A         I:::::::::::::::::::::::::::::::::::::Q:::::::::::::::::::::
hla0840         :DA:::::::::::::::::::::::::::::::::::Q:V::H::::::::::::::N:
Hbo2295         :DA:::::::::::::::::::::::::::::::::::Q:::::::::::::::::::::

consensus       KIIPPGAELPDDFEIYEDADVEDVVQDA----EGESVEELLEG-EPEEAPDV-GAD-D--
#oth            .....2.3.....1141.222233134422113422112..1311112523124313322
VNG1697         :::::N:::::::::Q::::I::L:V:EAE::A::DL::::::::DAD:E:A:D:::-::
NP4866A         :::::E::::::::V:::IE:::F:EE-::::PEGD::::::AP:DA::ES::::::-::
Hut3015         :::::N::::::::::::VE:::Y:E:V:::::EG::::::A::::::GDAAEA::A:::
rrnAC1605       :::::N::::::::::::V::::Y:A:T::::D::::::::::::::DSETAEEL:E:VA
Hmu2032         :::::E::::::::::::VE:::Y:A:T::::D::::::::::::::GEDAAAEHGAQAP
HVO_2558        :::::::R::::::VE:::NPDA:E:IE:::::T::::D:::E:::::V::::SE::-::
HQ2836A         :::::::::::::::HD:V:::P:E:V::::::SDG:DS::AE:D:ADI:::::::::::
hla0840         :::::::Q:::::D:R:::::PE:E:A:VDVDAD:G::S:::E:::::V:::::::::::
Hbo2295         :::::::K:::::::E::::::P:E:AV:::::S:G::::::D:::::I::::A::QE::

consensus       -DADAPDEAPEEAIDEEVVE----------EVAEE-----FDDEDVEDDADVADESVDDA
#oth            1434524245415411121.1111111111123421112353244224433432455415
VNG1697         :A:AE:ESE:ADFE::::I:::::::::::-----:::::T::DVE:ELDEL::AVEGED
NP4866A         :----:E:VI::ETEA:A::::::::::::::::::::EII:E:G::AETGD:PT:PP::
Hut3015         :A:::A:D:A:D:P:::::::::::::::::A::A:::EE:::V::P:::G:E::-L:EL
rrnAC1605       AG::DDS::D::FV:::I:::::::::::::----:::::--:VE:PT:D::E:VD::EL
Hmu2032         A:E::DEDELV:DV:::::::::::::::::ATD:::::::::VETPS:E:-::VDI::V
HVO_2558        :---:DAD:ETD:V::D::::::::::::::A:V::::::AVE:E:V::::DEE:A:EEV
HQ2836A         ::VTV:Q:T:::I:::::::ADPGVSSEDE::VT:PVDIGG:::::::IEV:S:D:GN:T
hla0840         ::VEI:::D:A:::::::::::::::::::::V:::::::TQ:TAT:ATDVA:E:P:G::
Hbo2295         :EVEV:::E:S:V::::I::::::::::::::V:::::::--SG:::S::E-T:::E::E

consensus       E--EDDDEELDEEVEAEAEDLVAEMED-----------EDEDEE-E----
#oth            2114344321.213132.11.32..1222221121111224223222221
VNG1697         :::D:EFSDV:D:AADT::::LD::D::::::::::::::GGA::-::::
NP4866A         A:::EP::A:::D::::::E:LD::::::::::::::::TT:::ET::::
Hut3015         ::::SV:::::::T:EA::E:LD::D:EEADADDGDATA:A:ADE:GEAE
rrnAC1605       ::::AV::::::D::::::E:MD::D-::::::::::::EG:D::-::::
Hmu2032         ::::SIE:D:::DTA::::::IE::D:ADSSADG:::::EG:D::-::::
HVO_2558        -::V::::::::D:AE::A:::::::::::::::::::::D::TE:E:::
HQ2836A         :TVAEEV::::A::::::::::::::::::::::::::I::EDV:-::::
hla0840         :::A::ID:::::I:S::A:::::::A:::::::::::A:::::D:::::
Hbo2295         :::PA:EA::::::::::::::::::A:::::::::::A::::DD:ETEE