|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1711 | NP1704A | hla1135 | rrnAC2235 | Hmu0443 | VNG2536 | HVO_1815 | Hbo1673 |
1012 | NP1704A | 1736 | 749 | 791 | 771 | 712 | 816 | 819 |
1067 | hla1135 | 749 | 1817 | 779 | 815 | 757 | 929 | 837 |
1117 | rrnAC2235 | 791 | 779 | 1711 | 1018 | 827 | 885 | 972 |
1089 | Hmu0443 | 771 | 815 | 1018 | 1744 | 727 | 890 | 883 |
1039 | VNG2536 | 712 | 757 | 827 | 727 | 1718 | 884 | 860 |
1313 | HVO_1815 | 816 | 929 | 885 | 890 | 884 | 1720 | 1163 |
1267 | Hbo1673 | 819 | 837 | 972 | 883 | 860 | 1163 | 1802 |
253 symbols consensus ---------MRVLRGRAPDRDADREVTRALAEEVADTGEPALRVWTPHRQVAFGRRDARA #oth 11111111111121.1444223.4321332235133423.12.1.3.2122......232 NP1704A ::::::::::H:V::ALDSA::::Q:VQR:::S::S::V::::::Q:PKH:::::::SA: hla1135 ::::::::::::::::D:RPAV:::H:A::LADAS:-:T:GV:::::P:::::::::::E rrnAC2235 :::::::::::L:::::T:PET:F:R::EI::T::EDR:::::::R::::::::::::NS Hmu0443 :::::::::::::C:::V:P:::I:R::R::D::::SRV::::::R:::::::::::::E VNG2536 ::::::::::::V:::::G::::TA:::D:L:W:RANN:::V:::P:G:V::::::::NE HVO_1815 ::::::::::::I:::G:::E:::A::A:MLR:AG::::::F:A::::::L::::::T:: Hbo1673 MADERGDRAV::V:::VAT::S:QT::TEMS:Y::E::N::F:A::::::M:::::::H: consensus DGYERARAAARERGFPVIERSVGGRAVAYTGRTVAFAHAVPTEDGRG--GIDDRYEAATT #oth 32133.332.33.113322.31..1....224.111141213334.2112133..23243 NP1704A ::::H::L::::::YTP:Q:RA::T::::APG:::::Y::S:AT:::::::E:::RT::E hla1135 P:FG::KRL:A::::EP:::D::::::::P:D:L:::::L:LV::::FES:P::::R:IE rrnAC2235 :S:D::CR:::D::YT::::A::::::::::S::S:SL::::::P::::T::::::W:K: Hmu0443 :::::::EI:TK::YA:L::A::::::::::::::V:L::::DG::S::::QR::D::SD VNG2536 A::AD:V::::D:E::TV::::::::::::ES:L:::RIT:A::M:T:::L:A::D:MVG HVO_1815 PR:DE:V:::E:::::AV:::::::::::::T:::::::::LD:A:S:::L:A::::G:: Hbo1673 E:::::CE::ES:::::VK::::::::::::::::::S:::I:ND:T:::L:E:::T::: consensus AVIRALRSLGAP-ARRGEPPASFCPGDHSVQAD--GKVAGIAQRVRRDVALVSGVVVVTD #oth 3342..432.241113...3221...2..211321..23.2....2443.1221311131 NP1704A RLLA::A:V::A:V:::::S:T::::T::LR:::::::::L::::KEET:::G:Y::G:: hla1135 T::::::::::E:VST::::E::::::::IRVAGG:::::::::::G:A:::A:CL:::R rrnAC2235 ::Q:::EDC:IT:::T:::D:A::::S::I:::::::IS:L:::::QS::VIG:I:::R: Hmu0443 RFRA::DT::VD::SE::::E:::::S::L::A:::::V:::::::QR::V:AAI:I:A: VNG2536 DI:D::HAV::TG::P:::A:::::::::::::C:::L::V::::T:GA::T:::L::D: HVO_1815 ::V::::T::V:::::::::::Y:::::::::G::::LC:L:::::KEG::::::::::: Hbo1673 ::::::::::V::::::::AN:::::::::::H::::IC:::::::::::::::::::A: consensus RD--AIADVLAPVYEALDVPFDPDSVGSVAAAGGPADPDRVIDALEAAFV----GDADPR #oth 242221.311211.311121...41....2411.252244132.2132111111123243 NP1704A :ASA:V::::E:::R::GT::::TT::::E::::::SAGQ:A::I::S::::::DERPAK hla1135 A:AS:V::AT:A::D::G:::::ET:::::E:N::E::KP:AR:::D:::DGPW::GE:K rrnAC2235 HE:::::E::::I::S:::::::Q::::::N:::TD::EQ::A:::RSLA::::DGR:VS Hmu0443 HG::EV::::::I:D::::S::::::::::R::::SE:::::::VVET:A::::DGH:TT VNG2536 :R::V::N::DA::G::GA::::E:::::R::::--::ADAR::V:R:L:::::::H::T HVO_1815 ::::E:::::::::::I:::::::::::::D:::::SS:A:C:::::::::::::::ET: Hbo1673 H::::::A::E::::::::::::G::::::RS:::G:AE:::R:::D::::::::::ER: consensus VDAARET------ #oth 2432433523221 NP1704A YRS:Q:LLDRSP: hla1135 I:RIDRSG::::: rrnAC2235 :S:I::::::::: Hmu0443 :ERVDS:SGLRDT VNG2536 :::VHS::::::: HVO_1815 :ED:ADLA::::: Hbo1673 :TD:::RVDD:::