|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1577 | VNG1715 | Hut3029 | rrnAC1592 | Hmu2017 | NP4894A | hla0851 | HQ2822A | HVO_2544 | Hbo2309 |
1253 | VNG1715 | 1612 | 1368 | 1319 | 1310 | 1134 | 1137 | 1133 | 1147 | 1103 |
1308 | Hut3029 | 1368 | 1587 | 1435 | 1480 | 1203 | 1127 | 1134 | 1105 | 1092 |
1314 | rrnAC1592 | 1319 | 1435 | 1590 | 1498 | 1153 | 1149 | 1110 | 1112 | 1123 |
1294 | Hmu2017 | 1310 | 1480 | 1498 | 1583 | 1176 | 1113 | 1106 | 1094 | 1082 |
1326 | NP4894A | 1134 | 1203 | 1153 | 1176 | 1598 | 1263 | 1221 | 1249 | 1211 |
1350 | hla0851 | 1137 | 1127 | 1149 | 1113 | 1263 | 2004 | 1314 | 1381 | 1352 |
1353 | HQ2822A | 1133 | 1134 | 1110 | 1106 | 1221 | 1314 | 1620 | 1369 | 1413 |
1337 | HVO_2544 | 1147 | 1105 | 1112 | 1094 | 1249 | 1381 | 1369 | 1590 | 1407 |
1345 | Hbo2309 | 1103 | 1092 | 1123 | 1082 | 1211 | 1352 | 1413 | 1407 | 1590 |
266 symbols consensus ----------------------------------------------------RNSNGWEP #oth 111111111111111111111111111111111111111111111112232324111.3. VNG1715 :::::::::::::::::::::::::::::::::::::::::::::::::::MSYNDT:Q: Hut3029 ::::::::::::::::::::::::::::::::::::::::::::::::::::-M:D:::: rrnAC1592 :::::::::::::::::::::::::::::::::::::::::::::::::::MSAN::::: Hmu2017 ::::::::::::::::::::::::::::::::::::::::::::::::::::-M::::N: NP4894A ::::::::::::::::::::::::::::::::::::::::::::::::::::-M:::::: hla0851 MTCWPTGRVRVASTSPRTPSSSTSRCTAAISTRPTYPSTSTTCSRQSRRTMS:HND:::: HQ2822A :::::::::::::::::::::::::::::::::::::::::::::::MSQSQ:::D::T: HVO_2544 ::::::::::::::::::::::::::::::::::::::::::::::::::MSS:N::::: Hbo2309 :::::::::::::::::::::::::::::::::::::::::::::::::MSQ:::::::: consensus RTRLGRQVQDGEITSMQQALNSGLPLKEPEIVDQLLPGLEDEVLDINMVQRMTDSGRRVK #oth 1....23.22.1131.42..32......212....1.1.1.................... VNG1715 K::::GL:::::VED:SE::DT:::::::::::::::::D:::::::::::::::::::: Hut3029 ::::::::A::::D::GD:::A:::::::::::::V:::::::::::::::::::::::: rrnAC1592 :::::K::VE:::D:::E::::::::::S:V::::V:D:::::::::::::::::::::: Hmu2017 :::::K::AN:::D:::E:::::::::::::::::V:D:::::::::::::::::::::: NP4894A ::::::K:A::::::::D::Q:::::::::L::::::::::::::::::::::::::::: hla0851 ::::::K::N:D:S::E:::D:::::::A::::::::::::::::::::::::::::::: HQ2822A ::::::M::::DV:::E:::::::::::::L::::::::D:::::::::::::::::::: HVO_2544 ::::::M::N:DV:::D:::ET:::::::QL::::::::D:::::::::::::::::::: Hbo2309 ::::::M::E:DV:::E:::ET::::::A::::::::::::::::::::::::::::::: consensus FRCVVAVGNRDGYLGYAEGRDDQVGGAIQKAIDVAKLNIIDVDRGSGSWEDGCGGPNSLA #oth .....11...1.22...11......1......111...2.3121.1....132.141113 VNG1715 ::::::I::::::V::::::::::::::::::E:::::::::S::C::::C:::R:HTV: Hut3029 :::::V::::::LV::::::::::::::::::E:::::M::IS::C::::C:::R:HTV: rrnAC1592 ::::::::::::LI:::::::::::::::::::I::::::::S::C::::C:::R:HTV: Hmu2017 :::::V::::::LV::::::::::::::::::EIG:::L::IS::C::::C:::R:HTV: NP4894A :::::VI::::::V:::Q::::::::::::::::::::::::PL:::::::RP::R:::M hla0851 :::::::::::::::::QA:::::::::::::::::::::E::::::::::QP::T:::T HQ2822A ::::::I:::N:F::::::::::::S::::::::::::L:S::::::::::SA::V:::T HVO_2544 ::::::::::::::::::A:::::::::::::E:::::::K::::::::::RA::L:::S Hbo2309 ::::::I:::::F:::::A::::::S::::::::::::::K::::::::::SA::L:::T consensus RRAEGKAGSVEVELQPAPRGLGLAAAETVRNVLELAGVEDAWTRSSGNTRTTVNLAKATF #oth 1221......2.123...1.....111..221.....12.2..213.1....1.1..1.1 VNG1715 LKST::::::D:::M:::::::::GG:::QH::::::ID:V::::::K::::::F::::: Hut3029 L:TT::::::::::::::::::::GG::::H::::::I::I:::::::::::::F::::: rrnAC1592 L:T:::::::::::::::::::::GG::::K::::::I::I:::::::::::::F::::: Hmu2017 L:TT::::::::::::::::::::GG::::K::::::I::I:::::::::::::F::::: NP4894A ::TT::::::::::K:::::::::::P:::H::::::::::::KCH::::::L::::::Y hla0851 :K::::::::T::I::::Q::::::::::::I:::::::::::N:D:::::::::::::: HQ2822A :N::::::::T::VM:::Q::::::::::S:I:::::::::::::N:::::::::::::Y HVO_2544 :K::::::::T:RII:::Q::::::::::::I::::::Q::::K:D:::::::::::::Y Hbo2309 :K::::::::T::IM:::Q::::::::::::I::::::Q::::::N:::::::::::G:Y consensus NALRNASESRTPERA-REKR--EVIE #oth ...321111.1.2111223223.141 VNG1715 ::::ET::A:V:QH::::E::::::: Hut3029 ::::STA:A:V:::::F:E::::::: rrnAC1592 :::Q:TA:A:V:::T:F::::::::: Hmu2017 :::Q:TA:A:V:::T:F::::::::: NP4894A :::::::::::::HT::QV::Q:AQ: hla0851 :::E::AQ::::QH::::VHYD::S: HQ2822A :::::::Q::::R::AAKQ:EQ::S: HVO_2544 :::K:::Q::::R:::::V::Q::R: Hbo2309 :::K:::Q::::R::::::Q:R:AGN