|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3416 | NP4288A | VNG0666 | Hut0144 | hla0871 | HQ1577A | HVO_1013 | Hbo0506 | NP2446A | rrnAC0044 | Hmu1063 |
1692 | NP4288A | 3216 | 1451 | 1421 | 1511 | 1442 | 1443 | 1488 | 1468 | 1500 | 1489 |
2228 | VNG0666 | 1451 | 3276 | 1884 | 1865 | 1815 | 1937 | 1933 | 1914 | 1975 | 2016 |
2353 | Hut0144 | 1421 | 1884 | 3460 | 1890 | 1969 | 1979 | 2058 | 1952 | 2120 | 2197 |
2425 | hla0871 | 1511 | 1865 | 1890 | 3481 | 2065 | 2305 | 2300 | 2053 | 1997 | 2006 |
2413 | HQ1577A | 1442 | 1815 | 1969 | 2065 | 3571 | 2295 | 2523 | 1880 | 2009 | 1946 |
2607 | HVO_1013 | 1443 | 1937 | 1979 | 2305 | 2295 | 3486 | 2637 | 2097 | 2100 | 2002 |
2697 | Hbo0506 | 1488 | 1933 | 2058 | 2300 | 2523 | 2637 | 3466 | 2052 | 2182 | 2094 |
2376 | NP2446A | 1468 | 1914 | 1952 | 2053 | 1880 | 2097 | 2052 | 3328 | 2241 | 2113 |
2621 | rrnAC0044 | 1500 | 1975 | 2120 | 1997 | 2009 | 2100 | 2182 | 2241 | 3432 | 2516 |
2532 | Hmu1063 | 1489 | 2016 | 2197 | 2006 | 1946 | 2002 | 2094 | 2113 | 2516 | 3483 |
495 symbols consensus ----------NRDSRRFHGLLAATAMGVYLLVVVGATTALTDAAAACSTWPACGGG--L- #oth 1111112344565874243323234211.2.222.1113212122214311615443161 NP4288A ::::::::::---MQ::T::VT::TLAT:::::L:VA:E::GGVSPAAV-------::-: VNG0666 ::::::::::---------------::::S:L:L::::S::G::S::Q:::S:N:Q::WF Hut0144 ::::::VLRNQI:DVPLST:::G:IV::::::IA:::ASIA::::T:::::::QLPS:T: hla0871 ::::::::::VTIPD::PAV:::A:::::::I::::::S::E:::::GG:::::N:::A: HQ1577A MAEQTATTTSAI:I::::::::G:::::::::L::V:::V:::::::AA::I::N:::W: HVO_1013 :::::::VAT::::NT:::::::::::::::LI::::::::::T::::A:::::D:::F: Hbo0506 :::::::VGS::THD:::A::::::::::::LL::::::::::::::TA::V::D:::F: NP2446A ::::::::::-MRTTG:S:::S::VV:::V:::::::A::A::::::QG::L:::D:::: rrnAC0044 ::::::::::MAE::T:T:::::::V::::::LA::::T::::::::T:::L:D:PVDV: Hmu1063 :::::::::M:GRRP::TTM:::S:V:::::::A::::SIA::VH::::::T:E:PI::: consensus --EDPALAVAW---GHRLAAAAVGLLVVATAVVAWRSGASRRVRAALAVALVLYPVQAAL #oth 116645555323123.133.242132433313314245653.124333324321.2.222 NP4288A ::---------:::A:YVT:G::W::L::A:AL:::DSRLP::KWGVTA:A:A::A:::V VNG0666 ALQSLD:V:V:::::::T:::LT::A::GA::L:::T:::::::T:VTL::A:::::VVI Hut0144 :::S:::::::::::::VL::T::VA:LLS:I:GF:RVSD::::::::::V::F:::V:: hla0871 :::L:TATEG:IAL::::L:VV::A::ALS::L:::D:::::I::::TA::LV::A::GV HQ1577A ::AT:GS:IG:LAV:::VV:VII:ICA:V:LG:GI:EHIE:::LITV::GSF:::I:::V HVO_1013 ::SL::TLDG:VAL:::V::VL::::T:::L:S::WTDT::::::TVTASA::::A::G: Hbo0506 ::TA:TT:AG:LAV::::::VL::::G:V:L:M:V:::VE:::LGSMV::G::::::::: NP2446A ::S::SVP::V:::L::GV::V:::::I:::::G:-:ETTA::KTT::L::A:::A:VV: rrnAC0044 ::TNT::L::::::::::V::::::::::M:::GL:::CRG::K::IIIGA::::::I:: Hmu1063 ::G:VG::I:::::T:::L:::::V:::GA:A:GI:T::R:::LGT:::::::::::I:: consensus GAVVAVGGAAAALPGLHLALGMGIFASLVLALAWHLEAETGDPDET----PVGEPEPAPP #oth .151245355542564..631231.252242.1.5.123213323423324567357534 NP4288A :MA:LAS:GPGQ:---::FG:V:V::L:LIT:T:::DR:VEP----::::RERAAAT:FN VNG0666 ::YT:MSAG::PFT:V::T::V:::::::V::::T:D:Q:::L---:::::SA:W:GE:R Hut0144 ::::T:T:::GIS:AV::GVA:S::G:::::::::::TMY:::T:EPDSGVTTQ:::VET hla0871 ::L::::SLP:::GS:::L::VA:::AVLAG:::W:::::::::DVPVD:FQPGTDDL:: HQ1577A ::::::Q:PDLT:SVI::IG:LS::LT:AI::::S::T:::::T::QTTPSKP::DQDL: HVO_1013 :::::TV:VGP::ST:::V:::V::GG::A::::T:::A:::::DA:::::::T:SMS:: Hbo0506 ::F::::::D:T:ST:::VV:::::G::::::::V::T:::::TDE:::::Q:V:::DL: NP2446A ::L::T:---S::AN:::FVA:A:::V::VG::::::::::SD:A-:::::ESP::L::: rrnAC0044 ::I::TS-:ET::::A:::::::::G:F:::::::::::::SD:::::::::KN:T:::E Hmu1063 ::F::LN::GTPF::A:::T::A:::A::G::::Q::::::TD:::::::::T:TVEV:E consensus PEDDDDPDVPP----DPRERLKATARAYFRLMKPRLMWLLCLVASAGMALAAT--TGG-- #oth 543355247451122545624632251.22.1..........1.311.211351154612 NP4288A R:G:G:DS:LL::::---Y::PDGL:R:VE:T::::::::::L:LS:::::TV::::A:: VNG0666 HT::G::TQ:G::::--------IV:::VQ::::::::::::::G::::::SS::QL:AG Hut0144 AV:::H:STRR::DRG:AGEML::LQ::V::T:::::::::::::::::::T:::G:R:: hla0871 V::APE::::T::::ATVP::R:::A::::::::::::::::::A:A::::G-::-:S:: HQ1577A :ASEY:::L:A:::::::D::L::L:::I::T::::::::::::::::T:G:::::T::: HVO_1013 AD:GER:P::T::::::VA:A:::VN::::::::::::::::::::A::::G:::VSP:: Hbo0506 ::GEH::TI:T::::::F::A::::A::::::::::::::::::::::::::::::ST:: NP2446A VDEEPAATEQ:::ALSGLA:A::::::::E:T::::::::::::G:::VI:G-::---:: rrnAC0044 :AG::T::RT:::ALTF::::VG::S::::::::::::::::::A:::::::G::Q--:: Hmu1063 -V:::E:EG::IGALST:::IT:::F:::::T::::::::::::A:::::::AHVA:PAN consensus -GLTPRTVLATLGGGVLSIGASGTFNHVLERDIDRRMQRTSDRPLATDLVPVRNALAFGL #oth 2423452222..3..1.11..1......1..13.21.4..3...2111421242.3...3 NP4288A :A:DGV:IA:::F::::AV::A::::::Y:::R::::N::A:::V:::A:G:GR:T:::V VNG0666 QQ:SAA::VL:::::::::::::::::::::EQ:EK:A::D:::VV::RI:P:::::::V Hut0144 :T::VE:I::::S::::A::::::::::::::V:K:::::::::VV::RI:I:::V:::: hla0871 ::F:::I:A:::V::A::::::::::::::::V:K:::::N:::::::::::SH:::::G HQ1577A :Q:::GIA::::::::::::::::::::::::V:::::::::::::::::::W::I:::I HVO_1013 :::::EVIA:::::::::::::::::::::::V:::::::::::::V::::::::V:::: Hbo0506 :::::EI::::::::::::::::::::::::::::::E::::::::V::::::H:V:::: NP2446A :TP:V:::VF:::::::A:::::::::::::::::::E::::::I::HE:::A::::::G rrnAC0044 :T::V::::L::::::::::::::::::::::::K::D::::::I::HQI:::::::::: Hmu1063 PS:ATS:I:L:::::::A::::::::::::::::K::D::::::I::HQL:::::::::I consensus LLAVASLALF-AQVNALAAALGLVAIVFYSVVYTLILKPNTVQNTVIGGAAGALPALIGW #oth 4.433.3331135..612.2.135.121.111..12...1.211..1..2..1...1..1 NP4288A G:L:V:M:VLVWL::P:::::TA::V:Y:A::::VV:::T:TW::::::G::::::V::: VNG0666 V:G:::::A:::A::L:T:V:::T::A:::I::::V:::::R:S:::::::::::::::: Hut0144 ::SAL:::I:::T::V:::::::S::L::::::::L:::::::::::::F:::::::::: hla0871 T:TLV:VG:::WT::P:T:::::I:::::::::::::::::::::::::::::::::::: HQ1577A ::T:I:IV:::SW::M:::I::G::::::::::::L:::::::::::::::::::::::: HVO_1013 ::T:::V:::::S::W:::V::V:::A::::::::::::::::::::::::::::::::: Hbo0506 V::A::V:::::W::T:::V::VG::L::::::::::::::::::::::::::::::::: NP2446A :::::::WA::LS::L:::::::A::A::::::::::::::::::::::::::::::::Y rrnAC0044 ::SF:::W:::W:::::V:V:::T:::::::I:::V::::::::::L::::::::::::: Hmu1063 A::::::::::W::::IV:::::A::L::::::::V:::::::::::::F::S::::::: consensus VAVTGSIGLGGLVLAAVIFLWTPAHFYNLALAYKDDYARGGFPMMPVVRGETETRKHIVW #oth 1.12.42141112..411.2..........1..21..11.11.11...2.114..11223 NP4288A A::A:::::PA:L::::V:C::::::::::I::R::::::DY::L:::A:VAA::RR:LY VNG0666 :::::AV:V::V:::G:::::::::::::::::::::E:::::L::::E::AK::R:::Y Hut0144 :::::TF:VP::A::GIV:::::::::::::::Q::::::::::::::::::V:::::LL hla0871 A::::E::G:::L::L:::::::::::::::::::::E::::::::::::::T::R:::: HQ1577A :::::D::F:::A::T::::::::::::::::::E::E:::::::::::::::::::VI: HVO_1013 :::::DV::::V:::V:::M::::::::::::::::::::::::::::::::::::::L: Hbo0506 :::::E::F:::L::::::::::::::::::::::::::::::::::::::::::::TL: NP2446A A::::T::I::::::::::::::::::::::::::::E:::::::::::::::::::::F rrnAC0044 ::AD::V::P:V:::VI::::::::::::::::::::EA::::::::::::::::::::Y Hmu1063 ::::::FD:P::A::GI:::::::::::::::::E::::::::::::::::::::::::Y consensus YLGATLVAAGALAAL-TALGVLYAVTSVLLGAVFLWAVVRLHREQTERAAFRAFHASNAY #oth 1111..3313312431351.41.3224333124..13125111122451.211......1 NP4288A W:::::LV::::G:V:AGF:PV::L::AVV:FG:::T::VQF:TESD:D:Y:S::::::: VNG0666 :I::::AS:VV::E:::G::P:::A:T::::::::YFAI:::::RDR:::M:S::::::: Hut0144 ::::::L::SG::T::AN:::::GA:VSIV::I:::::LV::::R:TD:::::::::::F hla0871 :::::::::V::::VAEP::A::::VG:AV::L:::M:::::Y::::D:::::::::::: HQ1577A W:AL::::::G::TI:E:::IV:::A:IVF:::::YFAIK::Y:::KA:::HS::::::: HVO_1013 W::::::::AG::VM:D::::V:L:::I:F:GA::YF:::::Y:RDDT:::::::::::: Hbo0506 ::::::I:::::::M:E::::V::L:::VF:::::YF::Q::Y::::S:::::::::::: NP2446A ::::::LG::::::V::D::W:::A:A::AAG:::::::E::Y:::D:::::S::::::: rrnAC0044 ::::::I:S:I:GV:::P::W::::::::::::::::::L:::::::A:::::::::::: Hmu1063 ::::::::::VMVSI::S::A::T::TA::::::::::::::::R::Q:::::::::::: consensus LGALLVAIVVDTLAV #oth ..31.3.11312112 NP4288A ::::::::L:E:MVI VNG0666 ::C::::V:L::MV: Hut0144 :::::::V:I:AM:: hla0871 ::L::F:V:F:A:V: HQ1577A :::V:I:::F:::VI HVO_1013 ::M::L::::::::I Hbo0506 ::M::L:V::::::: NP2446A ::LV::::LI:S::: rrnAC0044 :::V:I:::::A::L Hmu1063 :::::I:::::A:::