| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3164 | Hmu0970 | Hut2964 | Hbo4054 | VNG1414 | HQ2791A | hla1218 | Hbo2629 | NP2050A | HVO_2862 | HVO_B0004 | Hmu1647 | rrnAC0999 | Hut0602 |
| 2040 | Hmu0970 | 3513 | 2200 | 1829 | 1934 | 1844 | 1897 | 2004 | 1943 | 1953 | 1904 | 1875 | 1877 | 1924 |
| 1982 | Hut2964 | 2200 | 3095 | 1760 | 1928 | 1798 | 1891 | 1877 | 1953 | 1923 | 1861 | 1914 | 1861 | 1883 |
| 2249 | Hbo4054 | 1829 | 1760 | 3155 | 2079 | 2144 | 2097 | 2175 | 2140 | 2197 | 2070 | 2097 | 2152 | 2147 |
| 2535 | VNG1414 | 1934 | 1928 | 2079 | 3216 | 2213 | 2404 | 2291 | 2398 | 2372 | 2423 | 2360 | 2460 | 2434 |
| 2623 | HQ2791A | 1844 | 1798 | 2144 | 2213 | 3121 | 2368 | 2530 | 2415 | 2464 | 2355 | 2427 | 2498 | 2481 |
| 2672 | hla1218 | 1897 | 1891 | 2097 | 2404 | 2368 | 3516 | 2499 | 2439 | 2530 | 2267 | 2413 | 2461 | 2513 |
| 2721 | Hbo2629 | 2004 | 1877 | 2175 | 2291 | 2530 | 2499 | 3143 | 2467 | 2594 | 2436 | 2493 | 2483 | 2524 |
| 2695 | NP2050A | 1943 | 1953 | 2140 | 2398 | 2415 | 2439 | 2467 | 3214 | 2466 | 2436 | 2543 | 2603 | 2514 |
| 2708 | HVO_2862 | 1953 | 1923 | 2197 | 2372 | 2464 | 2530 | 2594 | 2466 | 3141 | 2414 | 2484 | 2527 | 2566 |
| 2674 | HVO_B0004 | 1904 | 1861 | 2070 | 2423 | 2355 | 2267 | 2436 | 2436 | 2414 | 3143 | 2552 | 2622 | 2621 |
| 2779 | Hmu1647 | 1875 | 1914 | 2097 | 2360 | 2427 | 2413 | 2493 | 2543 | 2484 | 2552 | 3222 | 2663 | 2679 |
| 2822 | rrnAC0999 | 1877 | 1861 | 2152 | 2460 | 2498 | 2461 | 2483 | 2603 | 2527 | 2622 | 2663 | 3159 | 2741 |
| 2877 | Hut0602 | 1924 | 1883 | 2147 | 2434 | 2481 | 2513 | 2524 | 2514 | 2566 | 2621 | 2679 | 2741 | 3174 |
477 symbols consensus ---------------------------------------------MDYDHVRE------- #oth 111122122222221212222222222212222212322233334387562251111111 Hmu0970 ::::VYALGNVHVYGVDTPAQKDCVDNSDNCVGRRVTVAAVVTELLPDPR::STVPTDLT Hut2964 :::::::::::::::::::::::::::::::::::::::::::::-MVTDLTP::::::: Hbo4054 :::::::::::::::::::::::::::::::::::::::::::LMVGSN:LEQ::::::: VNG1414 ::::::::::::::::::::::::::::::::::::MARAPPPES:A::E:::::::::: HQ2791A ::::::::::::::::::::::::::::::::::::::::::::::ERS:I:D::::::: hla1218 VNNVSLAVETLENGGFDLCTDRRRSEIRDHRRDARINVRSNGGSY::HE::::::::::: Hbo2629 ::::::::::::::::::::::::::::::::::::::::::::::::S:::G::::::: NP2050A ::::::::::::::::::::::::::::::::::::::::::::::N:EQ:::::::::: HVO_2862 ::::::::::::::::::::::::::::::::::::::::::::::::S:::D::::::: HVO_B0004 ::::::::::::::::::::::::::::::::::::::::::::::P::T::G::::::: Hmu1647 ::::::::::::::::::::::::::::::::::::::::::::::HF::LES::::::: rrnAC0999 ::::::::::::::::::::::::::::::::::::::::::::::S:ET:::::::::: Hut0602 :::::::::::::::::::::::::::::::::::::::::::::::E:S::Q::::::: consensus -VDPAVADALAGERDRQEDTLAMIASENHVSEAVLEAQGSALTNKYAEGYPGERYYAGCE #oth 12.23322.154.35..231.31.....11.1..13..1.3...2....2.14...1..2 Hmu0970 A::ESL::::SA::E::RE::TL::::::A:::::R::::V:::N::::R::D::::::: Hut2964 :::DELTA:::::C:::RE::SL:::::YA:D:::A::::V::::::::S::D::::::A Hbo4054 :T::::YS:IQN::Q::::S:GL:::::::::::::::::V::::::::::DA:::G::: VNG1414 ::::E:::::T:::H::N::::::::::::::::M:::S:E:::::::::::S:::G::: HQ2791A ::::DA::::SS::Q::::::::::::::::::::::::::::::::::::::::::::: hla1218 ::::E:::::::::::::Q:::::::::::::::::::::V::::::::::::::::::: Hbo2629 ::::EI::::E::E:::RN::::::::::::::::Q::::::::::::::::S::::::: NP2050A :A:::I:A:::D:::::::::::::::::::::::Q::S:E::::::::::::::::::G HVO_2862 ::::::::::D::VE::R::::::::::::::::::::::::::::::::::K::::::: HVO_B0004 :T::::::::::::E::N::::::::::::::::M:::S:E:::N:::::::S:::G::: Hmu1647 :A::D:TA::TD:V:::N::::::::::::::::::::::::::::::::::::::G::: rrnAC0999 :A::::::::E:::G::N::::::::::::::::M:::S:E:::::::::::::::G::: Hut0602 :T::::::::D:::N:::::::::::::::::::::::::T:::I:::::::K::::::: consensus YADEVEELAIDRAKELWGADHVNVQPHSGTQANMGVYLAVLDPGDKILSLDLTHGGHLSH #oth 21.21.4..12..21.21.212.......11..2111424.2...2....2.31...... Hmu0970 H:::::R:::E::R::FD:P:A:::::::::::LAA:E:L:A:::R::::E:SD:::::: Hut2964 ::::::Q::::::RA:FD:E:A::::::::S::LAA:Q:L:E:::T::::S:S::::::: Hbo4054 HV:T::Q:::::::::F:::YA:::::::::::::::F:M:::::R:::::::::::::: VNG1414 :::D:::::VA:::::F::::::::::::SS::::::F:T:A:::::::::::::::::: HQ2791A ::::I:S:::E::E:::::E::::::::::::::A:::TA:::::::::::::::::::: hla1218 ::::::T::::::::::::::::::::::::::QA::Y::::::::::::::N::::::: Hbo2629 ::::::::::E::::::::E::::::::::::::::::::::::::::::E:S::::::: NP2050A P::D::::::E::E:::::E:I::::::::::::A::::M:E:::R::::E:E::::::: HVO_2862 :::D::T::VE::::::::E:::::::::::::::::::M:::::::::::::::::::: HVO_B0004 ::::::Q::::::::::::E:::::::::S::::::F::::::::::::::::::::::: Hmu1647 P:::I:::::E:::::Y::::::::::::S:::::::::::::::::::::::::::::: rrnAC0999 :::D:::::::::::::::::::::::::S::::::::G::E:::::::::::::::::: Hut0602 :::D::Q::::::::::::::::::::::S:::::::::::E:::::::::::::::::: consensus GHPANFAGQTYEVEQYEVDAETGYIDYEGLAEQAEEFDPDIIVSGYSAYPREVEWERIQE #oth .122133234.2.11.3.1311.22.1151435.4132..221..2.....4222.3312 Hmu0970 ::D:TAVATH:D:AH:H::P:::RL:::AVT:R:R:T:::LL:::::::::QID:::L:A Hut2964 :Q:YTMVDDV:D:AH:G::V:::RL:H:RVR:R::AV:::LL:::::::::Q:DF:GM:A Hbo4054 ::HV::S::L::::::G::PDS:::::DT::DH:T:::::L::::S::::::FAY:::D: VNG1414 :::::::::L:::::::::::::RL:::A:R:H:DA:E::M::::F:::::::::::::A HQ2791A ::::::T::::T:::::::P::::::::::KTK:D::N::::::::::::::::F::::: hla1218 ::::::T::I::::::::::D:::::::::R:A::::E:::V:::::::::T:D::E::A Hbo2629 ::::::T:::::::::H::PD::::::DA::::::::::::::::::::::V:::::::D NP2050A ::::::T::::::::::::P:::::::DE:H::::A:E::::::::::::::::F::::: HVO_2862 ::::::T:KL:D:::::::::::H:::DQ:::K:AA:E:::::::::::::A::::T::: HVO_B0004 :::V:V::K:::::::::N:::::V::DQ::AK::A::::::I::::::::::::::V:A Hmu1647 :::::::::V:::::::::::::RL::DE:RA::::Y::::V:::::::::T:::::::: rrnAC0999 :::::::::V::::::K::E::::V:::::HDH::::E:::::::::::::::DF::::: Hut0602 :::::::::I::::::::::::::L:::::::T:A::E::M::::::::::::::::::D consensus AADAVDAYHLADIAHITGLVAAGVHPSPVGVADFVTGSTHKTIRAGRGGIIMCDEEYADD #oth 2.2411.2.2.....2...1..12151...3..1..2.......1....31124122.33 Hmu0970 I:ES:::V:V:::::L::::::DLY::::::::V::C:::::::S::::M::AS::::KA Hut2964 I:E::::V:V:::::L:::::::E:::::::::V:::::::::::::::M:L:G:A:::V Hbo4054 I:A::G:::::::::V:::I:::L:TN:::N:::::A::::::::::::L:LTTD:::EQ VNG1414 :::::G:L:M:::::::::::::E:A::::::::::::::::::::::::V::::AF::: HQ2791A :::LA::::::::::::::::::::T:::::::::::::::::::::::::::N::H::: hla1218 ::::::::::::::::::::::::::::::::::::::::::::::::::V:::::F::: Hbo2629 V:ES::::::::::::::::::::::::::I:::::::::::::::::::::TT::H::: NP2050A :::::::::::::::::::::::::Q::::::::::::::::::::::::V::::::::: HVO_2862 V::D:::L:::::::::::::::::::::::::::::::::::::::::::::::K::S: HVO_B0004 :::S:::::::::::::::::::E:S::::T:::::::::::::S:::::::::::H::: Hmu1647 ::::A::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0999 :::::::::::::::::::::::::E:::::::::::::::::::::::::::::::::: Hut0602 V::GA::::::::::::::::::::S:::::::::::::::::::::::V::::D::::: consensus IDSAVFPGAQGGPLMHNVAGKAVGFKEALDPEFEEYAQQTVDNAKALAERLQEHGLSLVS #oth 1.4111..6....11..1....1..3...523.131.43214..53.23215221221.. Hmu0970 V:R:::::C:::::::::::::A::H:::Q:A::S::D:I:E::TT:D:Q:SQRDFD::: Hut2964 ::R::M::T::::::::I::::A::G:::E:::DAD:A::IE::R:::A::ADR:FD::: Hbo4054 ::K:I:::S::::::::::::::::::::TD::::::::V:T:::T::DTFS:R:::::: VNG1414 :::::::::::::::::I:::::::N:::::A:::::A:V:E::AV:G:::::::F:::: HQ2791A ::NS:::::::::::::::::::::::::SD:::A::E:::K::EE::NT:TDA:::V:: hla1218 ::K:::::G::::::::I:::::::::::::S:D::::NV::::EV:::T::D::F:::: Hbo2629 V:K:I::::::::::::::::::::::::E:::::::ER::A:::T:::TFE:A:IEV:: NP2050A ::A::::::::::::::::::::::::::Q::::Q::::VI:::E::G:::::::F:::: HVO_2862 :::::::::::::::::I:::::::::::Q:::::::::V:::::::::TFED::::V:: HVO_B0004 V:::::::L::::IL::::::::::G:::T:::::::S:V::::A::G:::::R::E::: Hmu1647 ::::::::M::::::::::::::::G:::E::::::::A::::::::GD:::::::D::: rrnAC0999 ::A:::::S::::::::::::::::G:::A::::Q:::::::::I::G:QFK:::::::: Hut0602 ::::::::M::::::::I:::::::G::::AD::::::::::::A:::D:::::::E::: consensus GGTDNHLVLVDLRPSHPDTTGKDVEEALEDAGIVLNANTVPGETRSAFNPSGIRAGTPAL #oth 2...3.21.2.1131..132.541141.2321.23.21...113.12131..1.3..112 Hmu0970 ::::V:F::::FQQ::::L::QRA:A::::::::C:KS::::DR:KSTVT::V:L::::I Hut2964 ::::V:FA:::F:ET::EL::AVA:T::::V:::::KS:::::E::STVT::::I::::I Hbo4054 ::::K:Y::::::D::::V::S:A::::QSV::TV:K:::::::::P:TT::::V::::: VNG1414 ::::T::::::::E::::IS:G:::GE:::V::::::::::D::::::D:::::I::::: HQ2791A :::::::::::::::::E::::E::A:::S:::IM:::::::::::::::::::V::::: hla1218 :::::::::::::D::::LP:G:AAD::AA:N::::G:::::::::P:::::::V::AGV Hbo2629 :::::::::A:::::::::::::::A:::E::::::::::::::::::::::::::::G: NP2050A :::::::::::::E:::::S:TVA:::::A::::::K::::::::::::::::::::::: HVO_2862 ::::T::::::::D::::L::GTA:::::ST:::::::::::::::::::::::::::G: HVO_B0004 E:::T::::::::::::::::::::A:::EV::::::::::::S:::::::::::::::: Hmu1647 D::::::::I::::::::::::E::::::E::::::::::::::::::::::::::::G: rrnAC0999 :::::::::I::::::::::::E::::::E:::::::::::::::::::::::::::::: Hut0602 :::::::::I:::::::::P::::::::::::::::::::::::::::::::::::::G: consensus TTRGFDEDACREVADLIAEVVDAPDDEDVIAEVSERVDELCDEYPLYE--------- #oth .....2243412212314423133411426561444.441223323.5321222221 Hmu0970 ::::::A::T:RL:EA::D:L::::::T:RENAG:V:TD:::RF:V::::::::::: Hut2964 ::::::AA:T:RL::A::D:C:::::DG:REQAR:T:AD:AEAH:I:A::::::::: Hbo4054 :::::TQSEMETIGHA:VDIIEH:E:D::ATD:ATT::Q::EA::I::::::::::: VNG1414 ::::::A::MET:::C::R:I:NLG::S:Y:D:ADT:AD::EQ::Q::::::::::: HQ2791A :::::T:STV:::GE:MI:LI:D:T:DEA::A::D:::T:T::::::R::::::::: hla1218 ::::::A:VME::G:::HR:::NV:SD:::Y::G:::V:::::H::::::::::::: Hbo2629 :::::::A:V:::GE::VR:::NY:::ET:ES:A:::Q:::::H::::::::::::: NP2050A :::::::Q::ER:::I::N:I:N::::GT:D:AAAE::A::E:::::QGESGITDFE HVO_2862 :::::G::EI:::GE::VK:::::E:D::L:::::::Q::::AN::::::::::::: HVO_B0004 :::::::E:::T:::::Y:I::::H::S:EGF:DQK::::TA:::::D::::::::: Hmu1647 :::::::E::E::::::Y::::::::::::::::A:::::T::FD::GEDSEGLVYE rrnAC0999 :::::::::::::::::YK:::::H:D::V::::D::::MT:::T:::::::::::: Hut0602 :::::::::::::::::Y:::::::::G::::::::::::T::::::DD::::::::