|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3761 | VNG0384 | HQ1784A | Hut0137 | hla0079 | pNG7327 | HVO_0710 | Hbo0825 | NP0802A | rrnAC0709 | Hmu0932 |
2419 | VNG0384 | 3705 | 1940 | 2057 | 2140 | 2056 | 2104 | 2028 | 2130 | 2092 | 2138 |
2690 | HQ1784A | 1940 | 4129 | 2235 | 2292 | 2637 | 2364 | 2415 | 2484 | 2342 | 2276 |
2737 | Hut0137 | 2057 | 2235 | 3906 | 2217 | 2373 | 2318 | 2334 | 2375 | 2474 | 2410 |
2726 | hla0079 | 2140 | 2292 | 2217 | 4390 | 2334 | 2496 | 2476 | 2463 | 2400 | 2355 |
2811 | pNG7327 | 2056 | 2637 | 2373 | 2334 | 3992 | 2477 | 2417 | 2580 | 2433 | 2390 |
2950 | HVO_0710 | 2104 | 2364 | 2318 | 2496 | 2477 | 3836 | 2694 | 2567 | 2472 | 2469 |
2934 | Hbo0825 | 2028 | 2415 | 2334 | 2476 | 2417 | 2694 | 4116 | 2590 | 2478 | 2425 |
2949 | NP0802A | 2130 | 2484 | 2375 | 2463 | 2580 | 2567 | 2590 | 3748 | 2566 | 2529 |
2880 | rrnAC0709 | 2092 | 2342 | 2474 | 2400 | 2433 | 2472 | 2478 | 2566 | 3740 | 2889 |
2878 | Hmu0932 | 2138 | 2276 | 2410 | 2355 | 2390 | 2469 | 2425 | 2529 | 2889 | 3739 |
641 symbols consensus --------------------MTEPTVVTDRASFRATAADAPAGARVPVEARVTVTDPFEA #oth 111111111111111112233576524.1434.334.24.5242.111.412414..15. VNG0384 :::::::::::::::::::MPDSAALA::P:A::DA:G::T:PT:AV::::LP:::::A: HQ1784A :::::::::::::::::::::H:V:::::E:T:TE:::Q::::::::I:IEF:TE:::T: Hut0137 ::::::::::::::::::::::D:EL:::L:T:::R::G:DP:D:::::::::::::Y:: hla0079 ::::::::::::::::::::-MQRW:H:::DR::EV::A::::::::::R::A:D:::A: pNG7327 MLGLHNHTGRQGLSLRSNCT:::IRFS::KE::IE::RA:AD:T::::::::::A::::: HVO_0710 ::::::::::::::::::::::A:::::::DD::::::V:SP:::::::V::A:S:::D: Hbo0825 :::::::::::::::::MTNSLT:::E:R:EA:L::::::S::::::::L::R:S:::D: NP0802A ::::::::::::::::::::---MR:::::::::SA:::::DS::::::L::::A::::: rrnAC0709 ::::::::::::::::::::--MQS:E:::TT:TDL::::HPA::::::V::D:D:::L: Hmu0932 ::::::::::::::::::::--M:::::::D::LSV::::APT:::::::::::::::V: consensus YRRAR--DDAGGFYLETTGGQSGWGYFGVDPAERLTV-A-A------------------D #oth .....21354223312....23..11.133.32344153425333311111111233455 VNG0384 :::::::G::PS:HY:::::SD::::::::::SM:RADG:-::::::::::::::::::- HQ1784A :::::T::TDD:I::::::::::::::AI::V::IQ:TGS:ASIGQHPPQQESMAERGDE Hut0137 :::::::RST::CV::::::TE::S::::E:I:W::::-:-::::::::::::::::::: hla0079 ::::::::GP:::FY::::::::::::::::V:::::SGD:VVASE::::::::GSRSSG pNG7327 :::::D:ENTD:::::::::::::::::IE:I::VE:S:G:T:::::::::::::::PAQ HVO_0710 :::::::R:::::FY::::::P:::A::::::::::AD:PTD:::::::::::::DDWG: Hbo0825 :::::D:EGGD::F::::::::::S:::M::V:::C:GSD:ETLAA::::::::ADTGRG NP0802A :::::D:G:G:DI::::::::::::::AT::R::T::R:S:V::::::::::::::::AS rrnAC0709 ::::::::ET::V::A::::::::::::TA::DFRE::-:-::::::::::::::::::: Hmu0932 :::::DG:G:::V::G:::::::::::ATM::DFRE::-:-::::::::::::::::::G consensus PGE--SPSLAALDDALDGETLARG--DCDVPYPCGAFGWLSYDVARELESLPDS------ #oth 35643332153254523435.4.2111221.1.1.22..1...2...1.22.35111111 VNG0384 ---::AGA:DTVQA:V-:AR:::V::G::::H:G:L:::::::I:::::AI::T:::::: HQ1784A GSQGRG:::DE::SI::R:::T::::G:T:::::::::::::::::::::I:Q-:::::: Hut0137 :::::-DTIGR:V:R:GE:H:H:A::GA::::::::I::::::I:::I:A::G::::::: hla0079 DYRRP::T::::EGVI:::A:::::::::::::::::::::::A::::::F:E:APAGPG pNG7327 D:G::::::E:I::L::R:H:E::::::T::::::::::::::::::::DI:ET:::::: HVO_0710 ::VDTA::::::ESFV:S:::V:::::::A:::::L:::::::A::::::::EQ:::::: Hbo0825 :NANT:S::ST::A::ES:S:V::ETGVE::::::L:::F::::::::::::EL:::::: NP0802A D::::::::E:V:SL:E:T::E::::G::::::::V:::::::I:::::::::D:::::: rrnAC0709 :RA::GGT::::TEF::::R:V::::::::::::::V::::::::::::::::::::::: Hmu0932 :::::AD::T::A::V:ADD:::::::::::::::VI::::::::::::::::D:::::: consensus ATDDRGLPRLQLGVYDRVAAWEEPRG-------DD--VTLRVTACPRVDA------DDR- #oth 154223..211313113311.21.342111111432542212111142331212214351 VNG0384 T::A:::::::::::PTI:::R::FTPG:::::::::--::LI:AVP::E::::::YT-: HQ1784A T:PPSD:::V:I::F::::::::::-:::::::S:GS::MHI::::VIE::::::::TN: Hut0137 :ER::D:::::VA:::TLV:::::--:::::::AQAP:::::::::T::G::::::--D: hla0079 :V:::::::::I::F:::::::C:VSAGGDDSR:SAAS::::::::::PEGLDDPDA::D pNG7327 TVS:-::::::F::F:CI::::::--:::::::H:GN:EIH:::::T::G::::::--S: HVO_0710 T:::::::H::::L::L::S:A:::P:::::::::GET:::::C::V:E::::::::ED: Hbo0825 :D:::N::H:R::LF:::::::::::::::::::E:PA::H:::::::P:GADSTD:::: NP0802A TR:::::::::VAT:::::::::::S:::::::EE::T::::::::K:G:::::::Y:S: rrnAC0709 :DA::A::N::VAR:::F:::::::::::::::ES::::::::::::::D::::::FET: Hmu0932 :LR::A::::::AT:::I::::::::::::::::E::::::::::::L:E::::::FE:: consensus -PDAAYERGRERARDLAARAVDGDPSVGDPP-VAADEA-TFESDCGRAAFADRVRRVKRY #oth 1344211415521421284166.32424521243445113.1.3313121321.332152 VNG0384 :::G:F:A::D:VQS:::AIR::::A::P:::-:DSP::P:::VA:::::ES::::IQDA HQ1784A :IGYV::::LAH::::VS:IDT:TT::DE:SVS::NN:I::K:E::T:::E::::QI:E: Hut0137 :::::F:::::::LE::G::I::::G:EE:::-:TGPV:R::::T::E::T:::E:::E: hla0079 AL::LFDE:AS::D::ID:IES:N:A::PA:DPD:ST:::::::V::EGY:EA:S:::AS pNG7327 ::ES:F::::TM::E::QD:IH:EKH:QSQ::T::SQ::::::E::E::::::::QI:Q: HVO_0710 :L::V:DEA:T::T:F:TE::E:E:EPVSA:::ES::::::::A:::E:::::::AA::: Hbo0825 :L::L:::AI:::T:::E:::S::::DEAA::::G::::H::::::::::R:::SA:::: NP0802A :MS::::H:V::::::I:K:TN::::::Q::::SGT:::::::::T::::::::::::S: rrnAC0709 ::EL:::F:KQH:L:::RA:AQ:::::E:::::ET::::::::::T:ES:::::QT::Q: Hmu0932 ::AL:::F::QH:LE::KA:::::::::::::S:::D::R:::::TPEGY:::::A:QDA consensus IRDGDTFQANVSQRLVAPAAVHPVAAFDALRTVNPAPYSALLEFP--------------- #oth 111.1...1.2.1..5...21...421411.52......112.11111111111111111 VNG0384 ::::::::::::H::D:::::::::V:E:::DT::::::GIV:::::::::::::::::: HQ1784A ::::::::T:::H::S::::I:::TT:::::E:::::::G:I:::::::::::::::::: Hut0137 VHE:::::::I:H::A::::::::E::QS::IG::::::::::::::::::::::::::: hla0079 :::::::::::::::R::::::::E:Y::::::::::::G:I::SREGGAEGDNDTDDND pNG7327 V:::::::T:::H::T::::::::DT:::V:R:::::::::::::::::::::::::::: HVO_0710 V:::::::::L:::::::::::::D:YA:::E:::::::G:::L:::::::::::::::: Hbo0825 :::::::::::::::::::V::::::YR:::Q:::::::G:V:::::::::::::::::: NP0802A ::::E:::::I::::S:::T::::S:YA:::R:::::::::V:::::::::::::::::: rrnAC0709 :::::::::::::::R::::::::E::::::::::::::::::::::::::::::::::: Hmu0932 V::::::::::::::::::::::::::::::::::::::::V:::::::::::::::::: consensus -------------GVDLVSASPELLLHR-----------------DGDRLVTEPIAGTRP #oth 111111111111121..........15111111111111111111313324......... VNG0384 ::::::::::::::::::::::::::A::::::::::::::::::R:RE:T::::::::: HQ1784A ::::::::::::::::::::::::::SV:::::::::::::::::::E:VS::::::::: Hut0137 :::::::::::::AA::::::::::::::::::::::::::::::EA::::::::::::: hla0079 DNGDNDDGDDAPS:::::::::::::E:VPSGGAAEAGADRDEGEH:A:::::::::::: pNG7327 ::::::::::::::::::::::::::DV::::::::::::::::::::Q:L::::::::: HVO_0710 ::::::::::::::::::::::::::RV:::::::::::::::::E:::::::::::::: Hbo0825 :::::::::::::EA::::::::::V:V:::::::::::::::::E:::::::::::::: NP0802A ::::::::::::::::::::::::::DV::::::::::::::::::::::L::::::::: rrnAC0709 :::::::::::::::::::::::::::::::::::::::::::::::::IE::::::::: Hmu0932 ::::::::::::::::::::::::::R:::::::::::::::::::::AIE::::::::: consensus RGATPAEDDALEADLTDDEKERAEHAMLVDLERNDLGKVSEYGSVDVSEYRRVDRYSEVM #oth ..3.542.342132.35.2...................1121.1.2.51.....1....1 VNG0384 ::::::::::AR:A:RA:D::::::::::::::::::::::::::A:PD:::::A::::L HQ1784A ::E:S:D:IN::T:::E:S:::::::::::::::::::ICK::T:::::::::::::::: Hut0137 ::R:ADA:AG::RE:R:::::::::::::::::::::::::::::::E:::::::::::: hla0079 ::E::EA:ADM::E::G:::::::::::::::::::::::RF:T:::A:::::::::::: pNG7327 :::::S::ED::V::CS::::::::::::::::::::::::::::::A:::::::::::: HVO_0710 ::::TE::E:::::::T::::::::::::::::::::::::::::E:T:::::::::::: Hbo0825 ::::E:::::::R:::S::::::::::::::::::::::::::::E:::::::::::::: NP0802A ::E:QT::ER:::::LG::::::::::::::::::::::::::::::R:::::::::::: rrnAC0709 ::E::DA::R::T::L::::::::::::::::::::::::KF:::E::D::::::::::: Hmu0932 ::D::ED::::::E:L::::::::::::::::::::::::RF:::E:TD::::::::::: consensus HLVSLVEGRLRDDVSLADAVAAVFPGGTITGAPKPRTMEIIDEVEATRRGPYTGSIGAFG #oth ....321.321445322..12.1...............11.111.4........13333. VNG0384 ::::E:T:::::SC::R::I::::::::::::::::::AL::T::::::::::::LA:I: HQ1784A :::::I::QRQPQTQI:::::::::::::::::::::::L:::::T:::::::::::I:: Hut0137 ::::::::Q::::QD::::IR:::::::::::::::::A::::L:::::::::::::I:: hla0079 :::::I::EA:S::G:::::::C::::::::::::::::::::L:E:::::::::ML:A: pNG7327 :::::I::E:::A::I:::::::::::::::::::::::::::::R:::::::::::M:: HVO_0710 ::::::::TR:EGT:::::::::::::::::::::::::::::L:::::::::::MF:V: Hbo0825 ::::V:::QR:P:::V:::::::::::::::::::::::::E:::S::::::::::A::: NP0802A :::::A::TR:A:C::::::G::::::::::::::::::::::::T::::::::A::L:: rrnAC0709 ::::V:::::::GA::Q::I:::::::::::::::::::::::::::::::::::::L:: Hmu0932 ::::K:::::::GMD::::::::::::::::::::::::L:::L:::::::::::V:I:: consensus FDDRATLNIVIRTLVRHGDEYHLRVGAGIVHDSDPDAEYDETLAKARALVTAVDEALGE- #oth ..21.111.2.....14334.2....1.1.2..3.42..3..11.1.1.12.213.1244 VNG0384 ::GD:::S:T::::::RAAT:::::::::::::T:A::::::::::::::::LGD:G:IG HQ1784A :::::V:::T:::::::::::R:::::::::::V::H::Q:::D:::G::R:::T::::R Hut0137 ::::::M:::::::::::EQ::::::::::E::V::R::::::D::::::::::D::ADG hla0079 ::G:::::::::::::RAA::::::::::::::E:::::E:::::::::::::::::AAG pNG7327 :::::::::T:::::HYD:::R::::S::::::V:E:::R:::D:::::::::::::::Q HVO_0710 :::::V::::::::::F::::::::::::::::::QR::::::::::::I::I::::::: Hbo0825 :::::::::::::::H:D::::::::::::::::::::::::M::G::::N:I::::AAE NP0802A ::E:::::::::::::Q::S:Y::::::::D::::::::::::D:G::::::I::::A:: rrnAC0709 ::G:::::::::::::YAE:::::::::V:::::::R::Q:::D:G::::N:::::::R: Hmu0932 :::::::::L::::::YESR:Y:::::::::::V:RR::::::::G:::IN:::G::DA: consensus ----------------------RADATMEDER--------- #oth 23342333333313322111114656643563312121222 VNG0384 :::::::::::::::::::::::VAD:TP:NS::::::::: HQ1784A GSLTVGTTGNTLDESAA:::::KQG:SIQS::DGIETGDSS Hut0137 TDLSVVEPSRARDAG::::::::L::GE:GASGGPEEGEDG hla0079 ::::::::::::::::::::::GMAVEEGVD:::::::::: pNG7327 GSFAVE::::::::::::::::SETEP::GM:::::::::: HVO_0710 ::::::::::::::::::::::::NM:VGT::::::::::: Hbo0825 GHGMRVVERDDADNENGRDTDG:T::RT::HK::::::::: NP0802A ::::::::::::::::::::::::TF:::AAKR:::::::: rrnAC0709 :::::::::::::::::::::::V:LA:::QQ::::::::: Hmu0932 ::::::::::::::::::::::D:EM:V:A:::::::::::