|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2464 | HQ2665A | VNG0876 | HVO_1557 | Hbo3494 | hla2459 | Hut1126 | NP3940A | rrnAC0438 | Hmu1113 |
1816 | HQ2665A | 2554 | 1479 | 1612 | 1780 | 1735 | 1639 | 1530 | 1535 | 1604 |
1802 | VNG0876 | 1479 | 2474 | 1651 | 1692 | 1682 | 1581 | 1550 | 1565 | 1603 |
1993 | HVO_1557 | 1612 | 1651 | 2420 | 1896 | 1792 | 1605 | 1756 | 1675 | 1753 |
2099 | Hbo3494 | 1780 | 1692 | 1896 | 2511 | 2012 | 1699 | 1736 | 1720 | 1772 |
2071 | hla2459 | 1735 | 1682 | 1792 | 2012 | 3037 | 1718 | 1739 | 1682 | 1814 |
1871 | Hut1126 | 1639 | 1581 | 1605 | 1699 | 1718 | 2585 | 1677 | 1886 | 1831 |
1975 | NP3940A | 1530 | 1550 | 1756 | 1736 | 1739 | 1677 | 2437 | 1874 | 1865 |
1944 | rrnAC0438 | 1535 | 1565 | 1675 | 1720 | 1682 | 1886 | 1874 | 2498 | 2079 |
2050 | Hmu1113 | 1604 | 1603 | 1753 | 1772 | 1814 | 1831 | 1865 | 2079 | 2472 |
409 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111112232334 HQ2665A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::MS VNG0876 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::MT HVO_1557 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3494 :::::::::::::::::::::::::::::::::::::::::::::::::::::MTDTDAG hla2459 VGRLLRPLRRAHDRARVRRRTRLRRAVLSRASPAPAGPAVLALHPFAGNGALLLRGRPST Hut1126 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::MAE NP3940A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0438 :::::::::::::::::::::::::::::::::::::::::::::::::::::::MTDSE Hmu1113 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -MTDDDD-------------DDDGLTYADAGVDIDASEAATAALIGAVGEFEGD--YAGL #oth 5333264222233333223244111...22....22.....2..221123241.111... HQ2665A NPP::TAERNTDIKTNASEE:S:E::::A:::::E::::::::::D::::SA:::::::: VNG0876 AGENA:G::::::::::::::P::::::::::::AD::::::::VD:ASTGTD:TA:::: HVO_1557 :::N:--::::::::::::::S::M:::::::::E:::::::::VAQ::GGS:::::::: Hbo3494 EGPA:EA::::::::::::::::E::::::::::::::::::::V:::::S::::::::: hla2459 H::EG:GGETGGGDEEPTIDG::E::::::::::::::::::::::::::G::::::::: Hut1126 HEA::G::::GASSSDATDEP:EE::::AS:::::E:::::E::LD:A:::A::::F::: NP3940A :::E::S:::::::::::::EAE:::::ET::::E:::::::::L:::ED:::::::::: rrnAC0438 SEA::A::::::::::::::SEE:::::ET:::::::::::K:::::A:::K:::::::: Hmu1113 :::::S:::::::::::::::EE::::::S:::::::::::::::::A:::::::::::: consensus VDIGDRYLALATDGVGTKLLVAEALDDYSTVGIDCIAMNVNDLVAAGVRPVAFVDYLAVD #oth 2.1..1..1..........1..1.331...1........1...2.1.12.1.......11 HQ2665A I:::::::::::::::::::::A:MNE:::I:::::::::::::::::::::::::::I: VNG0876 ::L::Q::::::::::::::::::VG:::::::::::::::::L::::E:A::::::::: HVO_1557 L:::::::G::::::::::::::::::::::::::::::A:::::::::::::::::::: Hbo3494 L::::::::::::::::::I:::::G:::::::::::::A:::::::::::::::::::: hla2459 L::::::::::::::::::::::::S:::::::::::::::::::::::::::::::::: Hut1126 :::::::::::::::::::::::::::::::::::::::::::::::IE:::::::::IE NP3940A ::::::::::::::::::::::::::::::I::::::::A:::I:T::T::::::::::E rrnAC0438 :::::Q::::::::::::::::::V:::::I::::::::A:::I:T::E::::::::::E Hmu1113 :::::Q::::::::::::::::::I:::::I::::::::::::::T::E::::::::::E consensus EPDERFAEQVGEGLAAGAERADIALVGGETAVMPDVIRGLDLAGTCAGLAPKDALFPGEA #oth 3.12442222.4..45..24.222.2......1.1.13.1.1..111.1142222.313. HQ2665A D:::NLT::I:V::DT::DI:::T:I::::::L:E:VD:F:::::::::T:::GV:TET: VNG0876 ::N::R:AEL:D::::::DA:GV:::::::::::::V::F:I:::A::V:TDAE::::R: HVO_1557 A:::T::::::Q:::::::E:::E::::::::::E::N::::::::::::K:::I::::: Hbo3494 ::::::::::::::SV:::::::E::::::::::E::K::::::::::::D::::::::: hla2459 :::::::::::::::R:::L::ME::::::::::::::::::::::::::A:E:V:D:A: Hut1126 A::STTTG:L::::QI:::L:::::I:::::::::::D:::I:::A:::::::G::A::: NP3940A T::DET::::::::SE:::::E:::L::::::::::::::::::A:V:::TE:E::D::: rrnAC0438 T:::KTS:DI:A::RT::::::V::::::::::::::K:::I::::::::::::V::::: Hmu1113 :::DEES::I:A::RE::K:::V::::::::::::::K:::I::::::::::::V::::: consensus EPGDALVGFPSSGIHSNGLTLAREAVTRDHEYTDPCPFDGYETIGEALLEPTRIYTDLLD #oth 23..11..22.1...........2.3.2323.1213142334.2122..2...1.241.2 HQ2665A N::::::::A:::::::::::::T:I::EY:::A:::::E:::L:A:::::::::::::: VNG0876 :A:::::::::A:::::::::::::A:::GG:DE:Y:YE::::V:D::::::::::H::: HVO_1557 :E:::::::::::::::::::::K:A:A:GD:D:DWDG:D:D:V:::::::::L::Y::: Hbo3494 :S:::::::R:::::::::::::T:T::::::::D:::E:::::::::::::::::N::: hla2459 ::::::::WR:::::::::::::::A::E:A::::::::::::V:::::::::::::::: Hut1126 :::::I::W:::::::::::::::::::::D:D::F:PEPST::::E::A:::::::::: NP3940A AA::Y:::L::::::::::::::::::QR:D::::F:Y:DDR::::V::::::::REV:G rrnAC0438 :A:::I::W::::::::::::::::::Q:::::::F:PNPDT::A::::T:::::SEV:A Hmu1113 :::::I::W::A:::::::::::::::AN:::::DY:R:PEQ::A::::T:::::::::G consensus PLRAHETHAAAHVTGGGWTNLTRMGEFRYVIDDPFDAQPVFEFVQSEGSVSDEEMHRTFN #oth 221222122...1....11..3.1.531.113111222.1.11..43.4.1.2..12... HQ2665A :MH::DVRT:::I::::LR::E:L:SH::::::::ETP:I::::::A:N:::S::YQ::: VNG0876 AF:E:GV:::::I::::::::D:::G:::EVS::LP:::::DY::DA:G:::A::::::: HVO_1557 D:::A::N:::::::::::::E::::::::V::A::P::::::::ER:G:::::::T::: Hbo3494 :M:E:GVN:::::::::::::E:::D:H::VE:A::PH::::::::::N::::::::::: hla2459 :M:D:GVRG::::::::::::::L:AN:::V::A:EP::::::::::::::::::::::: Hut1126 :::E:G::::::::::::R::::::PY::E:EE::::::I:::::TV:D:::A::::::: NP3940A ::H:A::::::::::::::::S::::Y::::E:::EP::::::::E::::D::::::::: rrnAC0438 ::::S::::::::::::::::::::SY::E:T:::E:::::::::A::E::::::::::: Hmu1113 :::DA:::::::::::::::::::::H::E:T:::::::I:::::::::::::::::::: consensus MGTGFVAALPEDDAEALV-EATDGRVIGRVEDG----DGVSIRGLEL-- #oth ......2133242.2521235312211.3.431211133.21.1.2.22 HQ2665A ::::::C:MSPKN::M:A::::E:KI::Q:DT:::::E::::::::::: VNG0876 ::::::V:::::A:A::A:SQ:::E:V:::A::::::::::::::S::: HVO_1557 ::::::::V::EN::::::::::S:::::::A:::::::::::::D::: Hbo3494 :::::::::AP::::::A:D::::::::H::::::::S:::::::D::: hla2459 ::::::::VDP:A::S:A:AE::::::::::E:DDDEGS:A:::::::: Hut1126 :::::::TFDPA::MNV:E:TA:::I::::V:SD:::E:::::::D:Q: NP3940A ::::::::::A:::::V:E:LS:A:I::::::::::::A:E:::::::: rrnAC0438 ::::::::V::A::AEI:ADSE:A::::E:A::D:::EA:A::N:::TE Hmu1113 ::::::::M::SA::TV::::::::I::E:T::E:::GC:AV:::::TG