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[L] (RnhB) COG0164 Ribonuclease HII
9 genomes BUD0262 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1984

rrnAC3216

HVO_1978

Hbo1848

Hmu2550

Hut1679

hla1285

NP2392A

HQ3096A

Pairwise sequence scores
Consensus score1566 HQ3096A NP2392A hla1285 VNG1984 Hut1679 Hmu2550 rrnAC3216 HVO_1978 Hbo1848
861HQ3096A 1726 678 775 707 681 736 701 739 820
915NP2392A 678 1590 712 746 731 841 796 769 789
1063hla1285 775 712 1768 845 784 875 924 959 918
1140VNG1984 707 746 845 1568 998 962 1001 895 822
1098Hut1679 681 731 784 998 1885 961 1014 793 784
1180Hmu2550 736 841 875 962 961 1569 1143 893 887
1191rrnAC3216 701 796 924 1001 1014 1143 1559 918 873
1099HVO_1978 739 769 959 895 793 893 918 1607 1027
1068Hbo1848 820 789 918 822 784 887 873 1027 1687

274 symbols
consensus       --------------------------------------MRIGVDEAGKGPVLGSMFAAAV
#oth            11111111111111111111111111111111222225434.1........1.1.22.1.
HQ3096A         ::::::::::::::::::::::::::::::::::::MGP:::S::::::::::P:IC:::
NP2392A         ::::::::::::::::::::::::::::::::::::MTPLV::::::::::V::::V:::
hla1285         ::::::::::::::::::::::::::::::::::::::VYL::::::::::::P:V::::
VNG1984         :::::::::::::::::::::::::::::::::::::MA:F:::::::::::::::::::
Hut1679         MTGSGDGSTAGEDSADVDEQAPGERTCLDDWTDDGKSDL:A:::::::::::::::::C:
Hmu2550         ::::::::::::::::::::::::::::::::::::::::F:::::::::::::::::::
rrnAC3216       ::::::::::::::::::::::::::::::::::::::::F:::::::::::::::::::
HVO_1978        :::::::::::::::::::::::::::::::::::::::H:::::::::::::P:V::::
Hbo1848         ::::::::::::::::::::::::::::::::MTDQSPV:::S::::::::::P:V::::

consensus       RADPAALPDGVDDSKRLAAERREELAAEIRARDA-AVGVAEIPPARIDDPETDMNTLTVA
#oth            4222522.2112...215332.231254214533241132325134..23411..3..14
HQ3096A         H:S:SVI::DI::::::N:ST:RR:RETLESHT:IDI:T:V::V:Q::::R:::::::LN
NP2392A         ::PTE:::::I::::::TDD:::A::DRL:DA:RID:A:V:CQ::D:::--AN::D::::
hla1285         L:::V:::AD::::::I:PS:::SID:::::T::V:::::FVE::E::R:D::::::::R
VNG1984         AG::::V::::A:::::S:D::A::DDRV::SMR:-:::::V:VD:::::::::::::::
Hut1679         V::::D:::D:::::D:S::::::::TV::D:AH:::A:S:::V:::::T:::::::::V
Hmu2550         :C::GD:::::G:::GIPD::::R::EA::SVA::-::L:::T:E:::::::::::::::
rrnAC3216       ::::::::G::G:::DIRP::::R::K:::ESAD::::I:::SVE:::AD:::::::::E
HVO_1978        :G::D:::::IA::::::P:::::::::L:E::DIS::::FVE:ET:::::::::L:::R
Hbo1848         ::PAD:::::I::::::TSAQ:::IDQTL:G::DVT::::T:D:V:::::T::::S::::

consensus       AHAEAL-----AAVAADGDE---GVVDAGDVDESRFGRRVADRVA---AD--------VA
#oth            1123.31112245.152343111434..1.1215..22.135335233532222222233
HQ3096A         G:IA:I::ADLDG::TFNGT:::I:A::S::S::::AT:LES:LIDECNGIDTIALNHCS
NP2392A         :::A:::::::DG:::S:ET:::VLC::::::AG::AD:::AAAT:::L::::::::::S
hla1285         GQ:R:VRAALHGV::V:L::PIRV:A::::TS:A::A::LGES::DPDS:TTDTEHPE:D
VNG1984         :Q:D:::::::GR:V:::MA::::Y::::::N:Q:::::::N::::::::::::::::::
Hut1679         :::::::::::EP::S::LA:::TYL::::TNAV::E::::::IE:::::::::::::LD
Hmu2550         :::::::::::S:::T::LS::::L:::::T:AE::::::::::D:::SE::::::::ID
rrnAC3216       GQ:::::::::S:::R::LS::::T:::::T:AA::::::::A:D:::T:::::::::::
HVO_1978        :QV::A::::::E::V:A:::::L:C:::::S::::::::REGL:EAGVS::::::::::
Hbo1848         ::VA:V:::::::::Q:A:::::V:T::::::::::::::RTG:GDEGT::::::::::T

consensus       VRAEHGADETDPLVGAASIVAKVARDAHVAALAA---EYG-DVGSGYPSDPTTREFLRAY
#oth            2613.1..34233.1...11..22.133234133312421142.....1.32.14..341
HQ3096A         IE:R:::::D::::A::::I::AR::EQIT:::KEYETT::PI:::::::QK::A:::R:
NP2392A         :A::::::GS:D:::::::I::S::ER::EQ:SE:::Q:::A:::::::::::KA:::EA
hla1285         :S:A:::::D::M:::::V:::::::ERM:DID:DYPA:D:GL::::::::A::N:::::
VNG1984         :T::::::DEYD::A::::::::::::::D:::::::AFDA:I:::::::S::::::A::
Hut1679         L:::::::AAY:I::::::I:::E::::::E:::::::::::L:::::G:S:::D::ED:
Hmu2550         LGSA::::::::::::::::::S::E:::::::D::::F::A:::::::::A:::::KR:
rrnAC3216       :T:::::::::S:::::::I::::::T:::E:::::::::::::::::::::::T::AD:
HVO_1978        :::Q:R::DEHAI::::::::::E::RR:E:I:D:::::::E::::::::G:::::::E:
Hbo1848         :VS::R::::Y:H:::::V::::R::TLMETIGERYED:::P::::::::::::::::T:

consensus       VREHGELPACARRSWSTCDDVLAAAEQSSLDDF-
#oth            2543.52.4.1.4..2.231323223.24.3311
HQ3096A         I:TN:KV::::::::A:V::IVESI:::::S:L:
NP2392A         FEQE:GF:P:V:T:::::ERIR:E:::TD::G::
hla1285         :ND::NV:G::::::A::::::::::::G::E::
VNG1984         ::::::::E:::A::Q:SR:A:G:::::A::E::
Hut1679         IA::::::::::E::Q:SR::RN::G:AA::::D
Hmu2550         :D:::A::D:::T:::::::::::::::::AS::
rrnAC3216       :DR::::::::::::::::::::::S::T:S:::
HVO_1978        ::D::I::D:::K:::::A:LV::H:::::G:::
Hbo1848         :S:T::::D:::A::A::::::N::A::::A:::