|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1566 | HQ3096A | NP2392A | hla1285 | VNG1984 | Hut1679 | Hmu2550 | rrnAC3216 | HVO_1978 | Hbo1848 |
861 | HQ3096A | 1726 | 678 | 775 | 707 | 681 | 736 | 701 | 739 | 820 |
915 | NP2392A | 678 | 1590 | 712 | 746 | 731 | 841 | 796 | 769 | 789 |
1063 | hla1285 | 775 | 712 | 1768 | 845 | 784 | 875 | 924 | 959 | 918 |
1140 | VNG1984 | 707 | 746 | 845 | 1568 | 998 | 962 | 1001 | 895 | 822 |
1098 | Hut1679 | 681 | 731 | 784 | 998 | 1885 | 961 | 1014 | 793 | 784 |
1180 | Hmu2550 | 736 | 841 | 875 | 962 | 961 | 1569 | 1143 | 893 | 887 |
1191 | rrnAC3216 | 701 | 796 | 924 | 1001 | 1014 | 1143 | 1559 | 918 | 873 |
1099 | HVO_1978 | 739 | 769 | 959 | 895 | 793 | 893 | 918 | 1607 | 1027 |
1068 | Hbo1848 | 820 | 789 | 918 | 822 | 784 | 887 | 873 | 1027 | 1687 |
274 symbols consensus --------------------------------------MRIGVDEAGKGPVLGSMFAAAV #oth 11111111111111111111111111111111222225434.1........1.1.22.1. HQ3096A ::::::::::::::::::::::::::::::::::::MGP:::S::::::::::P:IC::: NP2392A ::::::::::::::::::::::::::::::::::::MTPLV::::::::::V::::V::: hla1285 ::::::::::::::::::::::::::::::::::::::VYL::::::::::::P:V:::: VNG1984 :::::::::::::::::::::::::::::::::::::MA:F::::::::::::::::::: Hut1679 MTGSGDGSTAGEDSADVDEQAPGERTCLDDWTDDGKSDL:A:::::::::::::::::C: Hmu2550 ::::::::::::::::::::::::::::::::::::::::F::::::::::::::::::: rrnAC3216 ::::::::::::::::::::::::::::::::::::::::F::::::::::::::::::: HVO_1978 :::::::::::::::::::::::::::::::::::::::H:::::::::::::P:V:::: Hbo1848 ::::::::::::::::::::::::::::::::MTDQSPV:::S::::::::::P:V:::: consensus RADPAALPDGVDDSKRLAAERREELAAEIRARDA-AVGVAEIPPARIDDPETDMNTLTVA #oth 4222522.2112...215332.231254214533241132325134..23411..3..14 HQ3096A H:S:SVI::DI::::::N:ST:RR:RETLESHT:IDI:T:V::V:Q::::R:::::::LN NP2392A ::PTE:::::I::::::TDD:::A::DRL:DA:RID:A:V:CQ::D:::--AN::D:::: hla1285 L:::V:::AD::::::I:PS:::SID:::::T::V:::::FVE::E::R:D::::::::R VNG1984 AG::::V::::A:::::S:D::A::DDRV::SMR:-:::::V:VD::::::::::::::: Hut1679 V::::D:::D:::::D:S::::::::TV::D:AH:::A:S:::V:::::T:::::::::V Hmu2550 :C::GD:::::G:::GIPD::::R::EA::SVA::-::L:::T:E::::::::::::::: rrnAC3216 ::::::::G::G:::DIRP::::R::K:::ESAD::::I:::SVE:::AD:::::::::E HVO_1978 :G::D:::::IA::::::P:::::::::L:E::DIS::::FVE:ET:::::::::L:::R Hbo1848 ::PAD:::::I::::::TSAQ:::IDQTL:G::DVT::::T:D:V:::::T::::S:::: consensus AHAEAL-----AAVAADGDE---GVVDAGDVDESRFGRRVADRVA---AD--------VA #oth 1123.31112245.152343111434..1.1215..22.135335233532222222233 HQ3096A G:IA:I::ADLDG::TFNGT:::I:A::S::S::::AT:LES:LIDECNGIDTIALNHCS NP2392A :::A:::::::DG:::S:ET:::VLC::::::AG::AD:::AAAT:::L::::::::::S hla1285 GQ:R:VRAALHGV::V:L::PIRV:A::::TS:A::A::LGES::DPDS:TTDTEHPE:D VNG1984 :Q:D:::::::GR:V:::MA::::Y::::::N:Q:::::::N:::::::::::::::::: Hut1679 :::::::::::EP::S::LA:::TYL::::TNAV::E::::::IE:::::::::::::LD Hmu2550 :::::::::::S:::T::LS::::L:::::T:AE::::::::::D:::SE::::::::ID rrnAC3216 GQ:::::::::S:::R::LS::::T:::::T:AA::::::::A:D:::T::::::::::: HVO_1978 :QV::A::::::E::V:A:::::L:C:::::S::::::::REGL:EAGVS:::::::::: Hbo1848 ::VA:V:::::::::Q:A:::::V:T::::::::::::::RTG:GDEGT::::::::::T consensus VRAEHGADETDPLVGAASIVAKVARDAHVAALAA---EYG-DVGSGYPSDPTTREFLRAY #oth 2613.1..34233.1...11..22.133234133312421142.....1.32.14..341 HQ3096A IE:R:::::D::::A::::I::AR::EQIT:::KEYETT::PI:::::::QK::A:::R: NP2392A :A::::::GS:D:::::::I::S::ER::EQ:SE:::Q:::A:::::::::::KA:::EA hla1285 :S:A:::::D::M:::::V:::::::ERM:DID:DYPA:D:GL::::::::A::N::::: VNG1984 :T::::::DEYD::A::::::::::::::D:::::::AFDA:I:::::::S::::::A:: Hut1679 L:::::::AAY:I::::::I:::E::::::E:::::::::::L:::::G:S:::D::ED: Hmu2550 LGSA::::::::::::::::::S::E:::::::D::::F::A:::::::::A:::::KR: rrnAC3216 :T:::::::::S:::::::I::::::T:::E:::::::::::::::::::::::T::AD: HVO_1978 :::Q:R::DEHAI::::::::::E::RR:E:I:D:::::::E::::::::G:::::::E: Hbo1848 :VS::R::::Y:H:::::V::::R::TLMETIGERYED:::P::::::::::::::::T: consensus VREHGELPACARRSWSTCDDVLAAAEQSSLDDF- #oth 2543.52.4.1.4..2.231323223.24.3311 HQ3096A I:TN:KV::::::::A:V::IVESI:::::S:L: NP2392A FEQE:GF:P:V:T:::::ERIR:E:::TD::G:: hla1285 :ND::NV:G::::::A::::::::::::G::E:: VNG1984 ::::::::E:::A::Q:SR:A:G:::::A::E:: Hut1679 IA::::::::::E::Q:SR::RN::G:AA::::D Hmu2550 :D:::A::D:::T:::::::::::::::::AS:: rrnAC3216 :DR::::::::::::::::::::::S::T:S::: HVO_1978 ::D::I::D:::K:::::A:LV::H:::::G::: Hbo1848 :S:T::::D:::A::A::::::N::A::::A:::