|
Pairwise sequence scores | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2581 | hla2226 | HQ1668A | Hbo0584 | HVO_1079 | Hmu0738 | Hut1581 | rrnAC0653 | NP4570A | VNG0459 | HVO_1078 | Hbo0583 |
2216 | hla2226 | 2686 | 2054 | 2091 | 2138 | 2082 | 2129 | 2147 | 2065 | 2062 | 1278 | 1565 |
2163 | HQ1668A | 2054 | 2555 | 2113 | 2132 | 2037 | 2028 | 2079 | 1958 | 2021 | 1280 | 1546 |
2240 | Hbo0584 | 2091 | 2113 | 2587 | 2201 | 2096 | 2083 | 2110 | 2078 | 2099 | 1289 | 1516 |
2402 | HVO_1079 | 2138 | 2132 | 2201 | 2582 | 2267 | 2235 | 2298 | 2111 | 2123 | 1315 | 1556 |
2336 | Hmu0738 | 2082 | 2037 | 2096 | 2267 | 2565 | 2268 | 2320 | 2069 | 2082 | 1285 | 1537 |
2283 | Hut1581 | 2129 | 2028 | 2083 | 2235 | 2268 | 2587 | 2336 | 2022 | 2067 | 1288 | 1511 |
2370 | rrnAC0653 | 2147 | 2079 | 2110 | 2298 | 2320 | 2336 | 2584 | 2084 | 2099 | 1330 | 1574 |
2176 | NP4570A | 2065 | 1958 | 2078 | 2111 | 2069 | 2022 | 2084 | 2564 | 2128 | 1350 | 1578 |
2226 | VNG0459 | 2062 | 2021 | 2099 | 2123 | 2082 | 2067 | 2099 | 2128 | 2589 | 1263 | 1476 |
1343 | HVO_1078 | 1278 | 1280 | 1289 | 1315 | 1285 | 1288 | 1330 | 1350 | 1263 | 2517 | 1742 |
1631 | Hbo0583 | 1565 | 1546 | 1516 | 1556 | 1537 | 1511 | 1574 | 1578 | 1476 | 1742 | 2476 |
337 symbols consensus --------------MSEDFPDYLDVDYTDGEGETPADYPSIEDKIEKAIEVTKQGLEQYE #oth 1111111112223345471.432222142.3313354113354112.1231225212312 hla2226 MQKAYFPSRRHIWR:TDN::ASV::::::::::D::::::LQH:::::::::R::::::D HQ1668A :::::::::::::::P:S::E:::::::::NE::ST:::T::S::::::T:::R:::::: Hbo0584 :::::::::::::::P:G:::::::A:E:::::::D:::::H:::::::::::E:::::: HVO_1079 ::::::::::::MSEA:S:::::::::::::::::E:::::::::::::::::::::::: Hmu0738 ::::::::::::::-MAA:::::::::::::::::E:::::NH::::::::::E:::::: Hut1581 ::::::::::::MTSAAE::ASV:::::::D::G:D::::::HQ:::::::::T:::::D rrnAC0653 ::::::::::::MSE:AE:::::::::::::::D::E::TVNH::::::::::T:::E:: NP4570A ::::::::::::::-MS:::::V::::::::::::ET::AL:::::::V::VRA:::E:: VNG0459 :::::::::::::::::::::::::::H::D::S::::STLDA:::::::::RD:::S:D HVO_1078 :::::::::LLYGSHVPRL:RPRLRRRPR:DRRG---L:DAGGQTR:GSDSGRDRARTD: Hbo0583 ::::::::::::::::PT::SDVTL::DG:RD:DASN:::L::::S::VA::Q:A:D::R consensus NPAVMWTGGKDSTLTLYFVKEVAERFDLEVPPVVFIDHYQHFDELHDFVEHWADEWDLDV #oth 2.21.........12..1131..3441223.321..1.11..11262.134..21.1112 hla2226 ::::::::::::::::::INQ:::K:GY:K:TA:::::F::::DIT:::::::::::I:L HQ1668A ::V:::::::::::::::IE:::RQY:::T:ST:::::F:::::I::::DR::N:::::: Hbo0584 ::V:::::::::::C:::I:::::KHGYD:::A:::::::::::I::::DK::::::::: HVO_1079 ::::::::::::::::::I::::::Y::::::A:::::::::::IM:::::::E:::::: Hmu0738 ::V::::::::::::::::::::D:::::::::::::::::::::IE:::::::::::E: Hut1581 ::V::::::::::::::::::::D:::::::::::::::::::::I::CK:::E::::EI rrnAC0653 ::V::::::::::::::::::::::::::::::::::::::::::I:::::::::::::: NP4570A T::I::::::::::::::::::::E:GYDL::A::::::::::::LE::DR::::::::: VNG0459 :::I:::::::::::::::::::DQ:::D::ETI::::F::::::::::D:::::::::: HVO_1078 R:::::::::::::V::V:R:::ADTGVP:::::::N:FE::::TEA::RE:::R:R::L Hbo0583 R:T::::::::::VV::V:R:::AEMGV::::::::::FE::P:TVA:::Q::::::::L consensus IWARNEDVGDYVDENGLEPGDDIPVSELSEHNQHHVREILEYEEDTFPFLLDTYVGNHLL #oth 13...2122411322213...1.1222.31411112132.21.21122111.111..... hla2226 VY:::::::A::E:H:::::::::::A:N:Q::::I:D:::::::::::::::::::::: HQ1668A :Y:::N:I:E::::H::::::E::::D::::::::::DL::::::::::::::::::::: Hbo0584 :Y:::::::A::::HS:S:::::DI::::::::::::NL::::DE::::::::::::::: HVO_1079 :::::::::A:::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0738 :::::T:I:::::::::D::::::IDA::::::::::::::::::S:::::::::::::: Hut1581 :::::T:::::::::::::::::::DA::::::::I:N:::::::::::::::::::::: rrnAC0653 :::::::::N:::::::::::::::D:::::::::I:N:::::::::::::::::::::: NP4570A VF:::::I:::::AH::A:::E:::D::D:N:RR:I:::::::::::::::::::::::: VNG0459 VY::::::::::TA:D::::::::I:::DDQ::::::DL::::::S:::::::::::::: HVO_1078 VV::::EFARL----:AS:::E::LAD:GDDTRREL-AR:GH:GE:VVLDA:SFE::::: Hbo0583 VV:::::FVRL----DAS:::E::LAD:::TTRREL-:R:D::G::LTLDA::FE::::: consensus KTVALNDALEEHDVDGIISGVRWDEQEARADETFFSPRHDPDIYPPHDRIQPILQFDEAD #oth ....1.121.2312..12..1.....11.11.....2...1131.....112....2.42 hla2226 ::::::N::::Y:I::V:::::::::::::::::::::::::LF::::::::::::A::: HQ1668A :::::::T::SYG:::V:::::::::::::K:::::S:::::::::::::::::::::RA Hbo0584 :::::::::::Y::::V::::::::::::::::::::::::::::::::V:::::::::S HVO_1079 :::::::T:::::I::V:::::::::::::::::::::::::::::::::::::::E:SA Hmu0738 ::::::::I:::::::::::I::::::S:::::::::::::::::::::::T:::::::A Hut1581 ::::::::I::::::::L::::::::::::::::::::::::::::::::::::::A::: rrnAC0653 :::::::TI::::::::L::I::::::S:::::::::::::::::::::::S::::A::: NP4570A ::::::N:::A::I::::::I:::::::::::::::::::::::::::::::::::::G: VNG0459 ::::::N::::::::::L::I:::::D:::::::::::::::V::::::::::::::::A HVO_1078 :::::::T::ARGF::VF:::::::::S:G::::::::::SEK::::::VH:::::E:T: Hbo0583 ::::F::VI:ADGF:::F:::::::::S::::::::A:::SEK::::::VH:::::E::: consensus VWDAFWNFVVPDTVEGYPDEGYVPQSDDDLPEGLTQEDVPVSPKYFAGFRSLGSEVSTDK #oth 1.31..212..121241.22.2..3462...212454.2.1.....2.1....1.2112. hla2226 ::E::::Y:::::::AF::::::::A:::::::VA:::::I:::::::::::::::::E: HQ1668A ::ET::::::::::SA::::::::TGA::::D:VSMN:::::::::::::::::::::E: Hbo0584 ::Q:::::::::::AE:::D:H::::SE:::ND:::D:I::::::::::::::::::::: HVO_1079 ::::::Y:A::::::N::ED::::T::T:::::V:::::::::::::::::::::::::: Hmu0738 ::::::::::::::::F:E:::::ET:::::::IE:D:I::::::::::::::::::::: Hut1581 ::E::::::::::::EF:E::::::GSE:::D:::K:::::::::::::::::::::::: rrnAC0653 ::E::::::::::::::::::::::GQ::::::IEK:::::::::::::::::::::::: NP4570A ::::::YY:::E:::AF::D::::::Y::::ND:GH::I::::::::::::::::I::E: VNG0459 ::::::YY:::E::ADF::D:::::DF::::ND::H::I:::::::K::::::::::::: HVO_1078 ::A:::EYI:::S:::::A-:H::A:I::::D:VEPA:L:::::::E:Y::::T:SGSA: Hbo0583 I:::::E:I:::AAS::::-:F::E:A::::::IAAT:L:I:::::E::::::T:SGSA: consensus SAEEPAWLQDLENTTERAGRAQDKEDLMERLRDLGYM #oth 2221...3..22311..1..........2........ hla2226 TT::::::::::D:::::::::::::::::::::::: HQ1668A TT::::::::V:::::::::::::::::::::::::: Hbo0584 TT::::::::M:::::::::::::::::::::::::: HVO_1079 ::::::::::M:::::::::::::::::::::::::: Hmu0738 A:Q::::Q::::G:::::::::::::::::::::::: Hut1581 A:::::::::MA::::::::::::::::::::::::: rrnAC0653 ::::::::::M:::::::::::::::::::::::::: NP4570A :D::::::::::::::::::::::::::A:::::::: VNG0459 A:::::::::::::::::::::::::::::::::::: HVO_1078 :DDR:::A:::GASA::E::::::::::G:::::::: Hbo0583 :DDR:::V:::GAS::::::::::::::G::::::::