|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1910 | NP2134A | VNG1037 | HQ3367A | HVO_1291 | Hbo0252 | hla1906 | Hut0963 | rrnAC0511 | Hmu1480 |
1320 | NP2134A | 1942 | 1009 | 1164 | 1211 | 1187 | 1168 | 1195 | 1236 | 1239 |
1218 | VNG1037 | 1009 | 1868 | 1124 | 1194 | 1161 | 1190 | 1061 | 1086 | 1102 |
1522 | HQ3367A | 1164 | 1124 | 1878 | 1294 | 1458 | 1361 | 1251 | 1254 | 1292 |
1567 | HVO_1291 | 1211 | 1194 | 1294 | 1873 | 1459 | 1365 | 1260 | 1321 | 1323 |
1620 | Hbo0252 | 1187 | 1161 | 1458 | 1459 | 1891 | 1517 | 1308 | 1366 | 1383 |
1556 | hla1906 | 1168 | 1190 | 1361 | 1365 | 1517 | 2345 | 1315 | 1341 | 1339 |
1512 | Hut0963 | 1195 | 1061 | 1251 | 1260 | 1308 | 1315 | 1970 | 1414 | 1430 |
1572 | rrnAC0511 | 1236 | 1086 | 1254 | 1321 | 1366 | 1341 | 1414 | 1990 | 1714 |
1566 | Hmu1480 | 1239 | 1102 | 1292 | 1323 | 1383 | 1339 | 1430 | 1714 | 1983 |
319 symbols consensus ---------------------------------------------------------MHR #oth 111111111111111111111111111111111111111111111111111111111133 NP2134A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::RQ VNG1037 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::--- HQ3367A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1291 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::H Hbo0252 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1906 MSASTTPSSTTPNSTTPSSDGTRRRSGSGSESADRSTRPLAPNGLRQSFYQSVRWAG::H Hut0963 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::K: rrnAC0511 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::K: Hmu1480 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::K: consensus VRFRDPAGSVRGGRWHVED------------DRVAFGDETYDLDE--VDVLPPCEPTKIV #oth 2..2122.42.5.3243231123122232333522122241344311122.1.23.1.1. NP2134A A::E::D:D::Y:ELFEDG:::TVRAYPKQEK:LTAAE:RF:R:D::IEL:A::D:S::: VNG1037 M:::T:::A::V:EYDPDA::::::::::::EV::AAGRAF:RAS:::::::::D:S:V: HQ3367A :::Q:::::T:D:T::--G:::::::::::::H:T:::Q:::INT:::SI:::SN::::: HVO_1291 ::::::::A::T:E::--G:::::::::::::S:S::G:R::::::::::::::::S::: Hbo0252 :::::::::::T:Q::--::::::::::::::H:S::G:::S:A::::EI:::::::::: hla1906 A::::::::I:E:TYDP:T:::::::::::::T:::AG:E:A::DPAI:::::A:::::: Hut0963 ::::::::TI:::::V:::GEAYVTTALGAS:P::AD:R::RASD::::::A:AQ::::: rrnAC0511 :::::TG:N::::::T:::GEPVVTAAAGPYG:I:::::S::P::::::I::::::::V: Hmu1480 :::::S::N::::::T:::GEPVVTAAAGPYG:I:::::S:APE:::::::::::::::: consensus CIGRNYADHADERDNDVPDRPLLFLKPPNTVASHGDTVTLPAGKERIDHEAELAVVIGEQ #oth .1.1.113..3.32422....1....1.111.21223332122221212...11.1..22 NP2134A :V:L::::::::QGKA::::::::::::::::APE::LE:L:DR-QL:Y::::G::::QR VNG1037 :V:::::A::::::A:::::::::::::TA::G:::ATP::PNT-:VE::::::::::T: HQ3367A :V:L::::::K::NK:I:::::::::::::L:G:::::::::N:D::::::::::I::T: HVO_1291 :::::::K::E:::EE:::::::::::::A::G::::::::::::QVE:::::::::::: Hbo0252 ::::::::::A:L:::::::::::::::::L:A:::::::::::::V:W:::::::::T: hla1906 ::::::::::A:L::::::::::::::::AL:::::EI:V::::D:::W:::I::::::: Hut0963 :::::FV:::::Q:A::::::::::::::::::::S::S:L::::::::::::::::::T rrnAC0511 ::::::::::E:M:SEL::::M::::A::A:::::KHL:M:S::::::Y::::G:::::: Hmu1480 :V:::::E::::M:::::::::::::::::::::DK::::L:N:D:::Y::::G:::::: consensus CRNVAADDAMDVVAGYTCMNDVSNRDDQDREQNWVRGKAFDNAAPLGPVLATPDEVPDDA #oth 12112353.22211.1.14..2...1..33.1......1..211.2..23.1.121.2.. NP2134A :::::EA::::::::F::V:::::::::AV:T:::::::::D::::::AI:::EA::E:: VNG1037 A::LD:GA::AA:E:::VA::::::T:::::::::::::::GSC:::::V:::::::::: HQ3367A A:::S:::::EY:::F::L::L::::::::::::::::G::::::M:::::::::::::: HVO_1291 :::::PE::AE:I::::V:::::::::::I:T:::::::::GS::::::::D::HL:::: Hbo0252 A:::::E::::Y:::F::::::::::::NK::::::::::::S::::::::::::::::: hla1906 :KD:D::::::::::F:::::::::::::::::::::::::G:::::::M:::::::A:: Hut0963 :HD:D:S::E::I:::::F::L::::::RV:T:::::::::::::M:::::::E:::A:: rrnAC0511 ::::SESG::::::::::V::I::::::R::::::::::::::C:I::LV:::EH::E:: Hmu1480 :K::SQRN:E::I:::::V::L::::::N::::::::::::::C:I::LV:::EH::::: consensus SIELRVNGETRQSSSREHLIFSVPELIAEITTYMTLEPGDVISTGTPEGVGPLADGDTVE #oth 213211..131.11213422.11.2.21...312..11...12...13..12141..412 NP2134A A:RC::::DL::D:::DQF::::::::::::S:::::::::V:::::::::::::::::: VNG1037 TVA:D::::R:::G:ISQFV:D::T:L::::AFV::Q::::VL::::P:::E:T:::R:A HQ3367A TV:::::::I::::T:TE::::I::::E::::::::::::::::::TS::AA:V:::HID HVO_1291 ::S:::::::::D::I::::::I:D:V::::::::::A:::::::::::::::::::::: Hbo0252 :V::::::::K:::::DYMM::::D::E:::::L:::::::V:::::::::::S:::H:A hla1906 :V::::::::K:::D:SY:M:D::T::E:::::L:::::::::::::::::A:S:::::: Hut0963 :::::::::::::G:::DMV:::::::::::D::::::::::A::::A:::::EN::::: rrnAC0511 :::::L::::K::::::::::::::::::::S::::::::::A:::::::::ME:::E:: Hmu1480 T::T::::::K::::I::::::I::::E:::A::::::::::A::::::::::::::S:: consensus VEIEGVGTLEHD-VRIP-- #oth 221..1.2.2141.24121 NP2134A :::::I:::KN:::::::: VNG1037 ASV::::::::TV::E:PA HQ3367A IT:::I:::T::::::::: HVO_1291 ::V::::I:::R:::QA:: Hbo0252 ::V::::V:::::::SAE: hla1906 :::::::::::::::V::: Hut0963 I::::I:::::G::H::E: rrnAC0511 :::::I:::K:S::K:::: Hmu1480 I::::::::K:S:::::::