|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4033 | VNG2208 | HQ1048A | HVO_2951 | hla1381 | NP0442A | Hbo1585 | Hut2372 | rrnAC2965 | Hmu3196 |
3007 | VNG2208 | 3936 | 2752 | 2885 | 2809 | 2886 | 2741 | 2723 | 2865 | 2716 |
3230 | HQ1048A | 2752 | 4659 | 3022 | 2823 | 2961 | 3134 | 2893 | 2967 | 2907 |
3424 | HVO_2951 | 2885 | 3022 | 4089 | 2968 | 2994 | 3165 | 2948 | 3100 | 3022 |
3317 | hla1381 | 2809 | 2823 | 2968 | 4102 | 3041 | 3023 | 2897 | 2969 | 3004 |
3372 | NP0442A | 2886 | 2961 | 2994 | 3041 | 3980 | 3079 | 3029 | 3057 | 2997 |
3422 | Hbo1585 | 2741 | 3134 | 3165 | 3023 | 3079 | 4134 | 3050 | 3023 | 3091 |
3308 | Hut2372 | 2723 | 2893 | 2948 | 2897 | 3029 | 3050 | 4167 | 3212 | 3183 |
3464 | rrnAC2965 | 2865 | 2967 | 3100 | 2969 | 3057 | 3023 | 3212 | 4290 | 3375 |
3417 | Hmu3196 | 2716 | 2907 | 3022 | 3004 | 2997 | 3091 | 3183 | 3375 | 4181 |
622 symbols consensus --------------------MTDDDPPDD-------------------RVRT-------- #oth 111111111111112334245322347326424223322222124533553211111111 VNG2208 ::::::::::::::::::::::S::TD:-:::::::::::::::::::----:::::::: HQ1048A MTRDTEDDITNTGSETETETK:ETETKTETDADIDIETKSGYAIDIGTD:D:HNDDIDVT HVO_2951 ::::::::::::::::::::::::E:AE-::::::::::::::::::::I:::::::::: hla1381 ::::::::::::::::::::-M:E:----:::::::::::::::::::TP:::::::::: NP0442A ::::::::::::::::::::::::::HTEPVA::::::::::::::::PA:::::::::: Hbo1585 :::::::::::::::::::MIR:::IET:A::::::::::::::SVREDA:::::::::: Hut2372 :::::::::::::::MTRDSH:::E:T::RRRE:::::::::::QAFP:L:::::::::: rrnAC2965 ::::::::::::::MTTDDSHH::AS::EDRRQSGGTWREPDARSGGEP:LP:::::::: Hmu3196 ::::::::::::::MSDPDRTR:EGS:::HSAASGSDWRE::::RSGTS::::::::::: consensus ---------DGGT--AEGADDVALDPWGSSTVSDYRKLFEEFGIEEFDEVLPDVPNPHYL #oth 11111111111122112121221......1112..23..21....3.122144.14..1. VNG2208 :::::::::----::TA::::::::::::A:I::::A::D:::::A:ED::DG::T::S: HQ1048A ALSTATAVS:::-:::A::::::::::::::::::Q:::T:::::T::D:::A::::::: HVO_2951 :::::::::::::::::::::::::::::::::::::::::::::::::::DE::::::: hla1381 :::::::::::::ER::PTE:::::::::AS:G::AD::::::::A::D:AES:AD:::: NP0442A ::::::::::::-::TK:::::T:::::::::A::::::::::::T::AL:A:::::::: Hbo1585 :::::::::::::S:::::::::::::::::I:::::::::::::::::::S:::::::: Hut2372 ::::::::::::A:::A::::TT:::::::::A:::N::::::::::::I:::::A:::: rrnAC2965 :::::::::::::E::::::EAT::::::::IA:::::::Q:::::::::::E::::::: Hmu3196 :::::::::::::E::::P:A::::::::::::::::::DQ::::S::::::E::E:::: consensus MRRGVIFGHRDYRPVAEAMRNDDPFAALSGFMPTGDPHIGHKLVFDEIIWHQQQGGDAYG #oth ...11.....2.22.13.1222111.1...............1....1....21.1.111 VNG2208 :::AI::::::::R::A:::::E:::::::::::::::::::M::::L:::::::::::A HQ1048A ::::::::::G:D:::::LQ:N::V:V::::::::::::::::::::::::::R:A:::A HVO_2951 :::::::::::::::LD::::G:D::V:::::::::::::::::::::::::E::::::: hla1381 ::::::::::E:DA:::::A::E:::::::::::::::::::::::::::::::::::F: NP0442A ::::::::::::E::::::A::E::::::::::::::::::::::::L:::::::::V:A Hbo1585 ::::::::::::::::::::DG::::V::::::::::::::::::::::::::::::::: Hut2372 ::::::::::::::::R:::DG::::V:::::::::::::::::::::::::R::::::: rrnAC2965 ::::::::::::::::D::::::::::::::::::::::::::::::::::::::::::A Hmu3196 ::::::::::::::::R:::EGE:::::::::::::::::::::::::::::ER:::::: consensus LIADLEAHSARGLSWDEIDEHARDYLLSLLALGFDPEEGELYRQSDNRELQDLAFELGAK #oth ....1..11...23.4..12.122.2...1.....112.1.....2.131.212....31 VNG2208 :::::::::::::D:A::::::E::::::::::::AD::::::::T::::::::::::IE HQ1048A ::::::::A::::::S:::D:::::::::::::::::S:::::::E::::::F:::::S: HVO_2951 ::::M:::::::IP::::N::S:::::::I:::::::::::::::::DR::R::::::G: hla1381 ::::::::::::M::::::::::N:::::::::::A:::::::::::::V:::G::::S: NP0442A :::::::N::::M::T::::::ES::::::::::::D::::::::E:D:::E:::::::: Hbo1585 ::::::::::::MT:E:::K::::::::::::::::::::::::::::Q::::S::::S: Hut2372 ::::::::A::::T:::::::::::I:::::::::::::T:::::E:::::::::::::E rrnAC2965 ::::::::::::::::::::::TN::::::::::::D::T:::::::::V:::::::::E Hmu3196 :::::::::::::T:E:::::::N:V:::::::::::D:::::::E::DV:::::::::E consensus ANFSEFEAIYGFDGETNVSHMQSVVTQMADILYPQL-DEPKPTVIPVGPDQDPHVRLARD #oth .111.112..1.112.21111...1..2........113...............1.11.. VNG2208 ::T:::::::::G:D:D:::::::::::::::::::::A:::::::::::::::::F::: HQ1048A :::::::G:::::S::::AY::::I::::::::::::E::::::::::::::::::F::: HVO_2951 ::::::QS::::::::::::::::::::::::::::::D:::::::::::::::::F::: hla1381 :::::::::::::::::I::::::I::T::::::::V::::::::::::::::::::T:: NP0442A ::::::QG::::::::S::::::::::::::::::::::::::::::::::::::::::: Hbo1585 :::::::::::::SG:::::L::::::::::::::::::::::::::::::::::::::: Hut2372 :R:A:::G::::::::D::::::::::I:::::::::E::::::::::::::::M::::: rrnAC2965 :::::LQ:::D:::::DI::::::::::::::::::::::::::::::::::::M::::: Hmu3196 :::::LQ:::D:::::D:::::::::::::::::::::G:::::::::::::::M::::: consensus LAARMRYFKVTEAYASFELDDAERDLVAAAYDALAAYAEDDDR----PRCGEAADWL--- #oth 1.4.211.1..2.1..114324..5.1242112146445344511113..531.421111 VNG2208 ::E:T::::::::F::VAF::D::P::R:::::RSQ::A:T:Q:::::::T::::::::: HQ1048A ::::::F::::K:::::::TES::E::::V::ERET::::VS::::::::A:::T::VDN HVO_2951 ::I:::F::::::F::::::::::P:::::H::RE:::::A:M:::::::::::E::::: hla1381 ::T:V::::::::F:::::N:D::Q::R::::::::GD:S:GDAEVDV:::D::E::::: NP0442A ::S::::::::K:::::::E::::::::R::E:::DNED:---::::V::SD::A::::: Hbo1585 ::::::F::::::::::::T::::::::SL:ET:DPADF:::D::::L::VHV:QF:::: Hut2372 V:::::::G::K::::::T::E::A:L:E::ET::GDHPG-ET::::I:::D::TY:::: rrnAC2965 ::::::::G::::F::::A:GV::T:LRQ::::REE::::A::::::::::::::::::: Hmu3196 :::::G::G::R::::::V:::::E:LG::HE::Q:DRSA:E:::::V::EA::::I::: consensus -----------A--RDADVAPD--------AARESAVAKLRAAGKEPLRPRVRFLDRNAT #oth 111111111234554346553321111114524324351.321.1......2..1111.. VNG2208 ::::::::::::AEPA:ADGV::::::::A:TA::V:Q::EN::M:::::::::F::Q:: HQ1048A LVTPVDNGSDD:RNE:T::S::TLGIIVPD:VI::TIK::EN::M:::::::::::A::: HVO_2951 :::::::::AD:DLDA:G:LVS:::::::ESV:::::E::EN::M::::::I::FA:Q:: hla1381 :::::::::ADYEPPET:SEATDL:::::V::KST:LD::::G:::::::::::F::::: NP0442A :::::::::::-::--ESE::::::::::DP:L:::::::D:G:::::::::::F::::: Hbo1585 :::::::::DGVTPEEL::VV::::::::AETIS::QT::NE::M:::::::::::A::: Hut2372 :::::::::DNERD:::TDGGA::::::::MTKDRLITM::E:::::::::::::::::: rrnAC2965 :::::::::::-::::HQP::A::::::::D::::I::::DE:::::::::I:::::::: Hmu3196 :::::::::::-::-E:EI:::::::::::DV:QRT:E:::::::::::::T:::::::: consensus DEAFEALIEAIDGEKRVYDEHIDAFDLDREAAEELAREVELDHGGYGFRAPSSIYHRFMT #oth 22..2..12212....1112.1.2.112423.42..13114411.1..42...1...... VNG2208 ::::T:::DE:A:::::FEG:V:::E:SA:T:RD::LA::V:::::::VP:::V:::::: HQ1048A ::::::::T:::::::R::::::::::SAAD:TD::::::TNN:::::V::::::::::: HVO_2951 :::::::::D:E::::R::Q::::::M:VDE::D::::::AH::::::I::::::::::: hla1381 E:::::::::V::::::FEG:V:::::T::E::A:::D::I::D:F:::Q:::::::::: NP0442A AD::::::::::::::::EG:::S:E::::::A::::::::::::::::P:::::::::: Hbo1585 ::::D::V::::::::R::::::::::SF:::D:::::::VE::::::V::::::::::: Hut2372 E::::::::::::::::::::::::E::H:::AA:::::::AN:::::L::::::::::: rrnAC2965 :A:::::::::::::::::::::T::::HAE::::::Q::::N:::::QP:::::::::: Hmu3196 ::::::::::VE:::::::::V::::M:::::T:::::IAI::::::::::::::::::: consensus GLTGGKMSSSIPASHISLLDDPEDGYDKVKSATTGGRETAEEQRELGGEADECPVYELYA #oth ..........3.1.......1..2.12..21.1....2..21...2..11.3........ VNG2208 ::::::::::E::::::::::::T:A:::AA::::::D::A::::R:::P:D:::::::: HQ1048A ::::::::::V::::::::::::T::E::::::::::::::K::::::K::::::::::: HVO_2951 ::::::::::::::::::::A::E:::::::::::::D::D::::::::::K:::::::: hla1381 ::::::::::V::::::::::::::::::RA::::::D::A::::::::::::::::::: NP0442A ::::::::::D:::::::::::::::::::A:A::::::::K:::::::P:G:::::::: Hbo1585 ::::::::::::::::::::::::::N::::::::::::::K:::::::::K:::::::: Hut2372 ::::::::::V:E::::::::::::::::RA:::::::::::::::::KP:::::::::: rrnAC2965 :::::::::::::::::::::::::::::::::::::S:::::::K::K::::::::::: Hmu3196 :::::::::::::::::::::::::::::::::::::S:::::::K::K::::::::::: consensus YLLAGDDDELAKEVYDECVGGERLCGGCKEQAAELMEEFLEDHQEKREEAEELLDDLDID #oth ...22...31122..3..22.1....1......31.43..12.1.1.213233.221..2 VNG2208 ::::::::A::E:::A::AN:D:::::::::::D::AQ:::T:::N::A:RDV:AE:::: HQ1048A ::::N:::T::TQ::::::S:D::::S::::::K::QA:::E:::::K:V:S::E:A::S HVO_2951 :::T:::::::::::::::::::::::::::::TM:R::::::H::::::A:V::S:::: hla1381 ::::::::::T:T::S:::N::::::::::::::::S::::::::::A:::::::::::: NP0442A ::::::::G::T::::::I::D::::::::::::::A:::D:::::::::R:::A::::E Hbo1585 :::S:::::F::::::::::::::::::::::::::RA:::::::::::M:::::::::S Hut2372 ::::D::::F:T:::E::A::::::::::::::::::S:::::::::::WADR::E:::: rrnAC2965 :::S:::::F:::::::::::::::::::::::::::Q:::E:::::A:W:DR:EE:::: Hmu3196 :::::::::F:::::::::::::::::::::::::::S:::::::::A:W:AK::E:::: consensus LDSDRRGT-------------- #oth 2214.34233322111111111 VNG2208 :::A:V--:::::::::::::: HQ1048A :I::::TVAPSDTADSTDNENT HVO_2951 :ETE:::VAAEH:::::::::: hla1381 ::::::::GGEH:::::::::: NP0442A :E:S::--:::::::::::::: Hbo1585 T::Q:::VAPSDD::::::::: Hut2372 F::S:KR::::::::::::::: rrnAC2965 :::::AP:SAD::::::::::: Hmu3196 :::::KR-::::::::::::::