[J] (RpsS) COG0185 Ribosomal protein S19 9 genomes BUD0564 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1693 rrnAC1607 HVO_2560 Hbo2293 Hmu2034 Hut3013 hla0838 NP4862A HQ2838A

Pairwise sequence scores
Consensus score	1049	hla0838	VNG1693	HVO_2560	rrnAC1607	Hut3013	Hmu2034	NP4862A	Hbo2293	HQ2838A
903	hla0838	1066	826	834	816	799	851	848	838	812
942	VNG1693	826	1055	924	876	831	870	900	838	825
935	HVO_2560	834	924	1051	841	808	861	889	868	803
921	rrnAC1607	816	876	841	1050	898	874	915	835	798
897	Hut3013	799	831	808	898	1066	866	911	808	803
956	Hmu2034	851	870	861	874	866	1058	906	887	862
970	NP4862A	848	900	889	915	911	906	1051	883	845
904	Hbo2293	838	838	868	835	808	887	883	1060	908
874	HQ2838A	812	825	803	798	803	862	845	908	1055

142 symbols
consensus       -MSSEYRTGREGE-FTYRGHTLDELQEMELDEVAELLPARQRRSITRGLSEEQQKLLEEA
#oth            11.23.11.2..21.21..12.1...212111121.....1..1.4...26123111221
hla0838         ::::D:::::::KE:A::::S:::::::DV:::::::::::::::V:::GT:::::::KV
VNG1693         :::T::::::::::::::::D:::::::S:ED:::::::::::T::::::::HH:V:A::
HVO_2560        :::TQ::::::::::::::Y:::::::::::::::::::::::T::::::A:HE:::AK:
rrnAC1607       ::::::QI:H:::::SF:::::::::::::E::::::::::::::V:::T::KH::::K:
Hut3013         MS:HD:QI:H::::::::::::E:::D:SVE:::::::::M::::K::::Y:KRQ:::::
Hmu2034         ::::G:Q::Q::D::::::::::::::LS::::::::::::::::::::TD:::::::::
NP4862A         ::::::QI:H:::::::::::::::::::::::::::::::::T:K::::V::E:::D::
Hbo2293         :::::::::::::E:::::Y:::::::::::::V:::::::::::N:::TLQKE::::TV
HQ2838A         ::::::::::::::::::::::::::A:S:EDITA::::::::T:E:::TT:::::R:TV

consensus       RDAGEEETANNPIRTHLRDMPILPEFVGLTFAVYNGQSFERVQVEPEMIGHYLGEFQLTR
#oth            1233312..13..........11.21.23.11.12.12...1311...2..1....1...
hla0838         :SRDK:T::D::::::::::::::::::V::S::::H::::::::::::::F::::H:::
VNG1693         :ES:T::::::::::::::::V::::::::::::T::E::::E:Q:::::::::::::::
HVO_2560        Q:KT::::::A:::::::::::::::::::::::T::E:::T:IQ:::::::::::::::
rrnAC1607       :E::::::::D::::::::::VV::M:::::::HD::N::::K:::::L:::::::::::
Hut3013         ::::::::::D:::::::::::::::::I::::H::::::::K:::::L:::::::::::
Hmu2034         :::EP::::::::::::::::::::::D:::::H::::::::::::::::::::::::::
NP4862A         :E::::::::::::::::::::::R:::::::::::::::::E:::::::::::::::::
Hbo2293         :E:DP:::::S:::::::::::::S::DK:::::::::::::RIQ:::V:::::::::::
HQ2838A         :::DPQK:::D:::::::::::::S::EK:I:::::::::::RI::::::::::::::::

consensus       SSVEHGQAGIGATRSSKFVPLK
#oth            31....................
hla0838         :T::::::::::::::::::::
VNG1693         ::::::::::::::::::::::
HVO_2560        ::::::::::::::::::::::
rrnAC1607       ::::::::::::::::::::::
Hut3013         T:::::::::::::::::::::
Hmu2034         K:::::::::::::::::::::
NP4862A         T:::::::::::::::::::::
Hbo2293         N:::::::::::::::::::::
HQ2838A         T:::::::::::::::::::::