|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 6144 | NP3500A | VNG0889 | Hut0820 | rrnAC0455 | Hmu1129 | hla2339 | HQ2651A | HVO_1573 | Hbo3474 |
4762 | NP3500A | 6135 | 4319 | 4428 | 4307 | 4458 | 4220 | 4191 | 4324 | 4369 |
4725 | VNG0889 | 4319 | 6112 | 4440 | 4280 | 4488 | 4339 | 4103 | 4263 | 4431 |
5137 | Hut0820 | 4428 | 4440 | 6149 | 4802 | 4927 | 4518 | 4257 | 4562 | 4541 |
5086 | rrnAC0455 | 4307 | 4280 | 4802 | 6095 | 5088 | 4433 | 4214 | 4480 | 4442 |
5161 | Hmu1129 | 4458 | 4488 | 4927 | 5088 | 6114 | 4501 | 4226 | 4426 | 4438 |
5103 | hla2339 | 4220 | 4339 | 4518 | 4433 | 4501 | 6155 | 4537 | 4780 | 4756 |
4894 | HQ2651A | 4191 | 4103 | 4257 | 4214 | 4226 | 4537 | 6403 | 4706 | 5035 |
5184 | HVO_1573 | 4324 | 4263 | 4562 | 4480 | 4426 | 4780 | 4706 | 6434 | 5179 |
5261 | Hbo3474 | 4369 | 4431 | 4541 | 4442 | 4438 | 4756 | 5035 | 5179 | 6450 |
876 symbols consensus MSSDAPD--PDDPG-AARVENVRIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRIL #oth ...121172454333.321441.113..............1......1.......1.... NP3500A ::::V::T:::V:-::EEI:P:::::::::::::::::::V::::::A:::::::Q:::: VNG0889 :::ES::V::::V-::D::K:::VDE:::::::::::::::::::::::::::::::::: Hut0820 ::::V:EG::GVTAD:::::H::::::::::::::::::::::::::::::::::::::: rrnAC0455 :::::N:::ANA:-::E:I:H::::::::::::::::::::::::::::::::::::::: Hmu1129 :::E:::::::::QA:S::DR::::::::::::::::::::::::::::::::::::::: hla2339 ::::V::AD:S:V::::Q:T:A:::::::::::::::::::::::::::::::::::::: HQ2651A ::::::ERFDPET:I::E::TA:::R:::::::::::::::::::::A:::::::::::: HVO_1573 :::::::SFEPGA:I::E:K:A:::::::::::::::::::::::::::::::::::::: Hbo3474 :::::::KFQK:A:I::E:Q:A:::Q:::::::::::::::::::::::::::::::::: consensus YAMHEMGVSSRSAHRKSSSIVGETMGDYHPHGDSAIYDTLARMAQDFSMRYPLVDGQGNF #oth ...212.111212.....11..11..1.....1.1..11.1....1..1.1..1...... NP3500A :::E::::T:::G:::::::::::::N:::::::::::A:::::::::L::::::::::: VNG0889 :::::S::T:G:G:::::N:::D:::::::::::P:::A:V::::::::::::::::::: Hut0820 ::::::::::G:S::::::V:::V::::::::::::::::V::::::::::::::::::: rrnAC0455 ::::::::::NT::::::::::D:::::::::G:::::::V::::::::::::I:::::: Hmu1129 ::::::::::::::::::::::::::::::::::::::::V::::P:::::::::::::: hla2339 :::::A::T:N::::::::V:::::::::::::::::::::::::::::::::::::::: HQ2651A ::::QS:I:A:::::::::::::::::::::::::::NA:::::::::::N::::::::: HVO_1573 ::::QA::T:N:S::::::::::::::::::::::::::::::::::::::::::::::: Hbo3474 :::N:A:::A::S:::::::::::::::::::::::::A::::::::::::::::::::: consensus GSVDGDPPAAMRYTEARMAPIAEELLADIEKDTVDFQSNYDDRLQEPEVLPSAFPNLLVN #oth ..1....1..........2.11....41.12...2.31.....14..4...132....1. NP3500A :::::::::::::::::::::::::::::D::::::E:::::::T::V:::ARV:::::: VNG0889 :::::::A::::::::::::::::::T:::::::A::A::::::T::A::::S::::::: Hut0820 ::M::::A:::::::::::::::::::::::::::::A::::::E::::::::::::::: rrnAC0455 ::M::::A::::::::::D:L:::::K:::::::::S::::::::::D::::KV::::L: Hmu1129 ::M::::A::::::::::S::S::::::::::::::::::::::R::::::::M:::::: hla2339 ::::::::::::::::::S:::::::::::R:::::T:::::::E::::::A:::::::: HQ2651A ::::::::::::::::::S:::::::DN::M:::E:TA::::::S::A:::A:::::::: HVO_1573 ::::::::::::::::::S:::::::D::D:::::::::::::K:::T::::S::::::: Hbo3474 ::::::::::::::::::::::::::E::D:::::::::::::K:::V::::S::::::: consensus GSSGIAVGMSTNIPPHNLGEVIDATIHLIDNPDCTVEDLME------HVKGPDFPTGANI #oth .1..........1.......11..122.143.112.3..12111111111......11.. NP3500A :A::::::::::::::::::::::A:::::::::A:A::IDTPDSDGYI::::::::::: VNG0889 ::::::::::::V:::::::::::::::::T:::::L::::::::::Y::::::::A::: Hut0820 :::::::::::::::::::::::::::::::::AE:T::::::::::Y:::::::::::: rrnAC0455 ::::::::::::::::::::LV:::V::LG::::::::::::::::::I::::::::G:: Hmu1129 :::::::::::::::::::::::::V::::::::E:::::D::::::::::::::::G:: hla2339 :::::::::::::::::::::::::VA::KE::::::::::::::::::::::::::::: HQ2651A :::::::::::::::::::::::::::::HH:E:::::::N::::::::Q:::::::::: HVO_1573 :::::::::::::::::::::V:::VE::E:::A::A:::::::::::I::::::::::: Hbo3474 :::::::::::::::::::::::::T:::E:::::::::::::::::Y:::::::::::: consensus VGRNAIHKAYKTGRGRLRVRAEYEVDEEEG---RIVITELPYQENKARLVERIADDVNEG #oth .1232134..31....211..1222343351222..12.1.1.2..1131....11.22. NP3500A :N:EG:WD::TE::::::::::MDIERTDRGGD:::V:::::::::::RI::::E::Q:: VNG0889 :::ADVKQ::Q:::::V:M::::H:ESNGR:RDS:::::::::Q::ST:::::::::RD: Hut0820 ::K::::A::A::::::T::::::FE:TDSGRP::::::I:F::::::M::::::::::: rrnAC0455 :::D::YS::A:::::::::::::::P::::::::::S::::::::::V::::::::::: Hmu1129 ::KD::YS::A::::::::::D::::P::N::::::V::I::::::::M:::::E::::: hla2339 :::::V::::::::::V:::::F::::::::::::::S:::F:Q::S:::::::E:::D: HQ2651A ::Q:::Y:::::::::V:::::FD:QDD--:::::::::::F:T:::::::::::N::A: HVO_1573 :::::V::::::::::V::::D:D:F:::::::::::N:::::::::::I:::::::::: Hbo3474 ::K::V::::::::::I:::::F::::DGD:::N:::::::::::::::I::::::::D: consensus KIEGIRDLRDESDRDGVRVVVELKRGANADVVKNQLLEHHLESTFGVINLALVDGQPRVL #oth 41..13.1......1.1.1.111.1221411.1.1..12...3..11.1.....12.2.. NP3500A :::::::I::::::::::::I:C:::S:::::::::::::::N::SI:S:::::D::::: VNG0889 :L:::T::::::::N:::I:ID::QK::T:::E:R:::S:::K::S:::::::::E:K:: Hut0820 I:::VS::::::::::::::I:C:::::V:::E::::D:::::::::::::::::E:::: rrnAC0455 :::::S::::::::N:::I:::::::::I:::E:R::D:::::::::::::::::::K:: Hmu1129 V::::A::::::::N:::I:::::::::V:::E:::::S:::::::::::::::DE:::: hla2339 S:::::::::::::::I::::::::D:M:E::::::::S:::R::::::::::::S:Q:: HQ2651A T:::::::::::::::I:::::::::::P:I::::::::::::::::::::::::::Q:: HVO_1573 :::::::I::::::::I:::I:::::VM:E:::::::DN::::::::::::::::::Q:: Hbo3474 ::::::::::::::::I:::::::::::P::::::::::::::::::::::::::::::: consensus TLKETLEEYVDHRREVVRRRSEYELAEAEDRAHILEGRLKALENVDDVVELIRNSEDRDA #oth 3..12.43124..12......121.3.23......2...3..31212..13.11221..3 NP3500A N:::L::AF:G::::::::::QF::Q::K::::::::::V::D::::::DH:Q::D:::: VNG0889 ::::L:A:::S::K::::::::HD:G:::::::::D:::T::::A:E:::::QDA::::: Hut0820 ::::::::::A::K::::::::FD::::::::::::::::::G:::S::D:::D:::::E rrnAC0455 S:::S:QH:I:::::::::::::D:::::::::::::::::::::E::::::::R::::: Hmu1129 :::::::H::A::K:::::::QF::D::Q:::::::::::::Q:::::::::QD:::::E hla2339 D::Q:::Y::E:::D:::::::H::::R:::::::K:::::::Q::::::T:Q::D:::: HQ2651A ::::::H::LE:::T::::::Q:::D:KR::::::::::R:::Q:::::DI::::T:::N HVO_1573 :::::::H:L::::D::::::::::::::::::::D::::::D:I:::::T:::::S::D Hbo3474 ::::::K::L:::::::::::::::G::::::::::::::::::I:::::T:::::S::D consensus AKAALR--------------PTFDFSEDQANHIVRMQLGSLTSMEAAEIEDEYEDVQARI #oth .223.31133112211112144111.22..4...2........1.231113...2.232. NP3500A :M::::::::::::::::::KAY:L:::::E:::::::::::::::G:::T:::::::E: VNG0889 ::ET:K::::::::::::::SA::::Q:::D::::::::::::::::D::S:::::T::: Hut0820 :::::E::::::::::::::E:::::TE::Q:::::::::::::::::V:::::E:E:E: rrnAC0455 :RTG:Q::::::::::::::ES:::::E::A::::::::::::::::::::::::::NT: Hmu1129 :RTE::::::::::::::::SQ:::::E::A::::::::::::::T::::S::::::::: hla2339 :::::E::::::::::::::ADYE:::A::E::::::::::::::TQ:::S:::::T::: HQ2651A ::::::GEHVVESDERGESL::::::::::::::A::::::::L:SD:::::::S::E:: HVO_1573 ::::::GEVEVEVG::GEPL:::::::E::::::S:::::::::::::::A:::::::T: Hbo3474 ::::::GEMTVEVD::GEPL::::::::::::::A::::::::::::::K::::E::D:: consensus ERLETILNDEDELDAVIKDELREIKDEYDDERRTSIIEDTGTVTHEDLIPEEDCVVVVTE #oth 11.221.22331.15.132..431123.1.1.2.222124.4.121...11.121..31. NP3500A ::::::::::S::LG:::::::D::A::A:::Q:DV:::A:S::R::::A::EV:::::: VNG0889 ::::E::GS:Q::LD::::::::::TQ:A::::::F:::::::AD::::::::T:::LS: Hut0820 ::::::::::S::LD:::::::AV::::::D:::::V::D::::R:::::::E:L::::: rrnAC0455 DY::SV::SREK::S::A:::Q:V::D:::D::::::::E:Q:::::::::::::::I:: Hmu1129 :::Q:::DS::::LT::::::::::A::::D:K:::L:AE:E:::::::::::::::I:: hla2339 :::::::G:P::::Q::IT::::::::::::::::F:::V:D::::::::::E::::MS: HQ2651A :::Q::::NP::::::VE:::AT:R:K:A:::::R::::D:::::::::AQ::V:::::: HVO_1573 :::::::G:QS::::::ES::LD:::::A:D::::FVAN::E::RA:::::::V::::S: Hbo3474 D::NE:::NP::::::::S::TA::::::::::::F:::::::::::::A:::V:::::: consensus DDYIKRMPLDTFDAQHRGGKGIIGTDLKEGDRVSSVFRANTHDYLLCFTNHGQVYRLKTY #oth 2..1..11225.13.1........221.11.2..2.13111..1..3..21..1.3.121 NP3500A E::V:::::SE::P::::::::::SRP:::::::T::T:S::::::::::Q:::::::VF VNG0889 G:::::V:AE::::::::::::::S:::D:::::T::T:S:::::::::DQ:::::::V: Hut0820 ::::::::A:R:::::::::::::A:P:::::::T:::::::::::A::::::::::R:: rrnAC0455 ::::::::VEN::P:N::::::::A:P::N::::K:::::S:::::::::Q::::::::: Hmu1129 ::::::::V:A::::N::::::::S:P:D:::::K:::::S:::::::::Q::::::::: hla2339 :::::::S::::R::N:::::::::::::::::::::A::S:::::V::::::I:E:::: HQ2651A :::::::S:ED:RS:::::::::::S::D::T::::YV::::::::Y::S:::::Q:::: HVO_1573 ::::::::VSR:RD:::::::::::::::::N:::::VT::::D:::::::::::Q::A: Hbo3474 ::::::::::::R::::::::::::::::::::::::V:S::::::Y::::::::K:::: consensus EIPEMSRTARGKSAVNLLDLDDGEEITAVVNTD--DFDD--DEYLTMVTRNGYVKRTCVD #oth 12...1.....1..1.21212.1.112...2312212332413221.1.24..1...324 NP3500A :L:::G:::::T::::V:::N:::::::::::::::I:-::EG::A:A:EA::::::A:S VNG0889 QV:::::::::T::::I:::::::::S:::TA:DL::KA:D::::::A:::::::::S:G Hut0820 :::::::::::::::::INF::::::::::SM:::E:::::::CI::A::Q:::::::CS rrnAC0455 ::::::::::::::I::I:::::::L::::S::::E:G:::::CI:::::::::::::CS Hmu1129 ::::::::::::::::II::G:D:::::::S::::::EE::::C:::::::::::::::: hla2339 :::::::::::::::::I::::::::E:::::::::L::::::F::::::D::I:::A:: HQ2651A Q:::::::::::::::::E:::::Q:::::::AEM:I::DEER:F::::QS::I:::S:N HVO_1573 QV:::::::::::::::::F:::::::::::C::::LE::IEG::::::::::I:::GT: Hbo3474 Q:::::::::::::::::E:::::::::::::A:::IE:ET:K::::A:Q:::::::S:E consensus EFENILSTGIIAAKLEDGDELVDVEVTDGSGDLVIGTEAGMAIRFDESEVRAMGRSARGV #oth 4.2.1221..1.33.222.3.2.12..2154.2221126..2...3.311141..2.... NP3500A ::::VHAG::R:VS:::D:S:::::::::D:::LV::KH::T::::::DA:P:::::::: VNG0889 ::G:::::::::ID:::::A:A::::::::H:VIL:S::::::::::GD::::::N:::: Hut0820 :::::::::::::::::::::::AV::::ES::::A::D::T:::::T:A:Q:::T:::: rrnAC0455 :::::::::::::::::S:::I::D::::T:::::A:::::T:::S::::SE:::::::: Hmu1129 :::::::::::::::::::A::::::::D:::::VA::G::T:::::::::E:::::::: hla2339 Q:G::R::::R:IR:::::::::::::N:GT:I:::SRN::::::A:::A:::::T:::: HQ2651A S:Q::R::::::IS:GAD:K:I:::::::NR:IIL::RK::::::N:GD::SV::::::: HVO_1573 R:Q:::::::::T::DE::::::::::G:ES:::::::R::S:::::D:::::::::::: Hbo3474 K:Q:::T:::::T::DED:::A::::::::H:::LASRD:::::::::D::::::::::: consensus RGIKLEDDDAVAGVAATDEDDDRWLLTVTENGYGKRTDLDEYRTQSRNGKGLIDIKTNDR #oth 3.11.333.532121.322233332....23.1...14242.15...1....1...121. NP3500A N:::::G::RAT:LV:ASS::::D:::::K:::::::P:S:::R:::Y::::V::::DE: VNG0889 ::MD:DAA:RI:::::VESE:::S::::::F::::::RVG:::S::::::::V::::G:: Hut0820 :::D:R:G:N::::V::::H:E:A::::::R::::::P:S:::::::Y:::::::::G:: rrnAC0455 N::::Q:::K::AMV:::D::P:S::::::H:F::::K:::::::::Y:::::::::D:: Hmu1129 :::D:Q:G:K::AMV:::DH:::A:::::::::::::L:A::SK:::Y:::::::::D:: hla2339 I::D:REG::::::::I:::RHN:V:::::::::::S::::::L:::::::::::::G:: HQ2651A H::::::T::::AL::V:D:Q:D:V:::::H:::::::I:R::Q::::::::::::::E: HVO_1573 ::::::G::V::::::I:::HHS:I:::::::::::::::A:::::::::::::::A:E: Hbo3474 ::M:::G::ELV::::V:::RHN:V::::Q::::::S:IER::R:::::::::::::::: consensus NGPVCAVEAVGEDDHLVVMSESGQIMRTPVEDISTVGRNTKGVIVMDLDEDDTVASVDVV #oth ..5143431.433.3133..36...21321211.1.....1..41.42353.51.11225 NP3500A :::::SLD::S:::G::I::::::::::T:DE:::::::::::V::SV:D::RI:GI::D VNG0889 ::D:VS:D:::D::S:::::AD:::IQM::DE:::::::::::NI:AVGSG:E::G:S:R Hut0820 ::G:T::N::A::::VI:::AT:::::C::::V:::::::M::TI::VAA:::::::::I rrnAC0455 ::R:STAK::TDE::::I:::Q:::::IRAG:V:Q::::::::TI:G:E:::R::::T:: Hmu1129 ::R:ATAK::R::::::I:::::::::I:AG:V:Q::::::::KI:A::GV:N::::T:: hla2339 ::EAV:I:::TYG:::LA::DN::::::R::E::::::::::::::N::P::::::::I: HQ2651A ::H::E::T::IS:E:FM::RK:::L::::D:::::::::M:::::::EDT:::::::TH HVO_1573 ::::::INT:::G:::::::DE:::L::::::::::::::M:::::::::G:D::::::I Hbo3474 ::::::M:T::YG:::F::::::::L::::::::::::::M::T:::M::G:H::::::Y consensus PAEVDEDE---------------------------- #oth 345766543244242233232333332111212221 NP3500A S::-----:::::::::::::::::::::::::::: VNG0889 A:DQADG:E::::::::::::::::::::::::::: Hut0820 :GTAI::S:::::::::::::::::::::::::::: rrnAC0455 :::TE---:::::::::::::::::::::::::::: Hmu1129 ::::EN:::::::::::::::::::::::::::::: hla2339 SES:HGG:TDVEGDE::::::::::::::::::::: HQ2651A :RTD:SS:ADSGDGESESENATATTPS::::::::: HVO_1573 ::AMTTEGEELDDADSVEEDAETDAKADAKADADDE Hbo3474 NVGS::VDEEASDEEAPDDETSDEDTSD::EDTSTE