|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1231 | NP4898A | HQ2820A | VNG1718 | hla0853 | HVO_2542 | Hbo2311 | Hut3031 | rrnAC1590 | Hmu2015 |
920 | NP4898A | 1212 | 673 | 773 | 786 | 814 | 788 | 800 | 754 | 808 |
857 | HQ2820A | 673 | 1242 | 698 | 748 | 783 | 819 | 727 | 733 | 812 |
869 | VNG1718 | 773 | 698 | 1153 | 742 | 783 | 758 | 729 | 660 | 755 |
953 | hla0853 | 786 | 748 | 742 | 1230 | 979 | 993 | 788 | 722 | 759 |
1007 | HVO_2542 | 814 | 783 | 783 | 979 | 1239 | 1032 | 822 | 735 | 817 |
1032 | Hbo2311 | 788 | 819 | 758 | 993 | 1032 | 1241 | 818 | 777 | 831 |
964 | Hut3031 | 800 | 727 | 729 | 788 | 822 | 818 | 1220 | 872 | 904 |
889 | rrnAC1590 | 754 | 733 | 660 | 722 | 735 | 777 | 872 | 1235 | 964 |
990 | Hmu2015 | 808 | 812 | 755 | 759 | 817 | 831 | 904 | 964 | 1212 |
166 symbols consensus MTSKKRRQRGSRTHGGGTHKNRRGAGHRGGRGRAGRDKHEFHNYEPIGKSGFKRPEKAQR #oth 112.11........1..1........1.....3...2...3..1212..2..1..34343 NP4898A -M:::::::::::::::S::::::::::::::N::::::::::H::L::::::::Q:TR: HQ2820A ::::::::::::::::::::::::::::::::::::::::Q::::::::H:::::PG:E: VNG1718 ::D:::::::::::::::::::::::N:::::::::K:::Q::::DV::::::::::TD: hla0853 ::N:::::::::::::::::::::::::::::A:::A:::::::G:L::Y::::::S::T HVO_2542 ::::::::::::::S:::::::::::::::::::::::::::::::L::H:::::DVL:D Hbo2311 ::::::::::::::::::::::::::::::::::::::::Y::::::::H::::::D:KD Hut3031 ::D:SK::::::::::::::::::::::::::D:::::::M::HP:::::::T::::::D rrnAC1590 :::::K:::::::::::S::::::::::::::D::::::::::H::L::::::::Q:V:E Hmu2015 :::::::::::::::::S:::::::::::::::::::::::::::::::::::::Q:VKE consensus DVAEVEVQELDEDAALLAADGVAEEDDDGYRIDARDVVEDGYEADVVKVLGGGQVRNELE #oth 2232251221..2221221223..43222141.1.111112422.31....2.11141.3 NP4898A ::ET:NLR:::::I:V:VE::I:::S::::VV:::::::::::::::::::A:T:Y:::: HQ2820A T:::IS::::::G:::FV:EET::F::GA:H:::::IAD:ADSS:IT::::D::::Q::H VNG1718 :::VLS:::::::IPV:SES:::::TEF:::V::::::D::WD:::::::::::LYEQ:: hla0853 E:L::T::K:::::::Y:::DL::::G:A:V:::::::::::::::::::::::::R::R HVO_2542 :::::K::K:::::::::::::::K:G:T:V::::::A:::W:::::::::::::::::H Hbo2311 T:V::K::K:::::::::::DL::K:G:A:Q::::::A::::::::::::::::::Q::H Hut3031 :::T:::KT:::::::::::::::QT:G::E::::::::::H:V:::::::::::::::T rrnAC1590 EA:TID:R:I::NVT:::::D:::VE:G:F:V:V:::::EADD::Y:::::A::::H::T Hmu2015 EI::I::R:::::::::::E:::::T:G:::::::E::DE--D::A:::::A:::::::: consensus VVADAFSDGARELIEGAGGSAELSERGEEA--AEEEDTDDEEDDEE #oth 22..1.123.2222.411.323111212441234444643433213 NP4898A I::::::ES:EQAL:V:D:E:V:::::::L::EA:K:ST::::E:S HQ2820A :I::::::T::T:::D:::::T:T:Q:KSI:::VG::EEPNSN::N VNG1718 :T::::::A:V:::::E::D:VV:::A---::--------S::::: hla0853 :T::::TA::V::::E:::E:T::::A::::AD:S:N:S:D::::A HVO_2542 ::::::TA::V::::E:::D::::::A::::AEA::SA:AD::::: Hbo2311 ::::::TA::V::L:::::::D::::A::::Q:::DN::::::S:: Hut3031 I:::::::::::K::A:::TT:::D:::QR::---Q:K::ADT:TA rrnAC1590 LI::D::E::::KV::::::V::TDL:::R:Q::A:E:E:ADA::: Hmu2015 L:::::::::::KV:A::::V::T:L::KRAQ:KA::DE::AT:::