| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3684 | VNG1719 | NP4900A | hla0854 | HVO_A0174 | HVO_2541 | Hbo2312 | HQ2819A | Hut3032 | rrnAC1589 | Hmu2014 |
| 2824 | VNG1719 | 3704 | 2617 | 2599 | 2618 | 2662 | 2698 | 2653 | 2516 | 2624 | 2598 |
| 2929 | NP4900A | 2617 | 3715 | 2711 | 2624 | 2747 | 2808 | 2759 | 2625 | 2645 | 2663 |
| 3010 | hla0854 | 2599 | 2711 | 3689 | 2700 | 2846 | 2885 | 2864 | 2563 | 2599 | 2546 |
| 3024 | HVO_A0174 | 2618 | 2624 | 2700 | 3805 | 2822 | 2767 | 2748 | 2619 | 2708 | 2607 |
| 3218 | HVO_2541 | 2662 | 2747 | 2846 | 2822 | 3647 | 3170 | 3086 | 2648 | 2732 | 2661 |
| 3321 | Hbo2312 | 2698 | 2808 | 2885 | 2767 | 3170 | 3676 | 3342 | 2673 | 2744 | 2717 |
| 3242 | HQ2819A | 2653 | 2759 | 2864 | 2748 | 3086 | 3342 | 3686 | 2662 | 2694 | 2663 |
| 2919 | Hut3032 | 2516 | 2625 | 2563 | 2619 | 2648 | 2673 | 2662 | 3697 | 2702 | 2754 |
| 3009 | rrnAC1589 | 2624 | 2645 | 2599 | 2708 | 2732 | 2744 | 2694 | 2702 | 3645 | 2866 |
| 2970 | Hmu2014 | 2598 | 2663 | 2546 | 2607 | 2661 | 2717 | 2663 | 2754 | 2866 | 3780 |
539 symbols consensus --------------------MSWKDTAEPVLTRMPAVARPEGHVPFRRKLGWTAGILVLY #oth 11111111111111111111.1..12.1.1.2.1.2.4..22....11.14..1.1.121 VNG1719 :::::::::::::::::::::G::EA:A:::::::::E:::::::::::MY::G:V:::: NP4900A ::::::::::::::::::::::::EA:::::::L:::K::DR::::K::::::::V:::: hla0854 ::::::::::::::::::::::::EV:::::::::V:E::A:::::K:::M:::::::V: HVO_A0174 VTTSVGATDHAIANSHSQST:::::::A:::S:::::::::S:::::::::::::::::: HVO_2541 :::::::::::::::::::::G:::A:::::S:::::::::::::::::::::G:::::: Hbo2312 :::::::::::::::::::::G::EA::::::::::::::::::::::::::::::::M: HQ2819A :::::::::::::::::::::G::E::::::::::S:::::::::::Q::::::::::M: Hut3032 :::::::::::::::::::::::::::::L:::::S::::::::::K::::::::V:::F rrnAC1589 :::::::::::::::::::::::::::::L:V:::::Q::::::::K:::T::G:V:L:: Hmu2014 :::::::::::::::::::::::::::::::V:::::R::::::::K:::A::::V:::: consensus FFLTNVTLFGLDT-GAGSDFFGQFRSILAGGQGSILQLGIGPIVTASIVLQLLGGADLLG #oth ...1.1542.23323634352.1.112.1131.121.1...............1.11... VNG1719 ::::::P:W:IQ::-::N::::::::L::::::TV:::::::::::::::::::::N::: NP4900A ::::::GIY::GQ:--:E:I:::::T::::E:::L::V::::::::::::::::::N::: hla0854 :::::INP:::AA::Q::::::::::V:::SS::L::V::::::::::::::::::N::: HVO_A0174 ::::::::::VG::-GSQ:I::::::::G::::TV::::::::::::::::::Q:G:::: HVO_2541 ::::::::::::A:ATAN:L::::::::::Q:::V::::::::::::::::::::::::: Hbo2312 :::::::M:::Q:Q:P:G::Y:::::::::Q::::::::::::::::::::::::::::: HQ2819A :::::::M:::Q:G:::G::Y:::::::::S:::::::::::::::::::::::::N::: Hut3032 :::R:INVY::G::-G::NA::R:S::::SQ::::M:::::::::::::::::::::::: rrnAC1589 ::::::K:::::I:D:SQQV::R:S::::S:::::M:::::::::::::::::::::::: Hmu2014 ::::::M:::::I::SD:APL:R:S::::S:::::M:::::::::::::::::::::::: consensus LDTDNDPRDQILYQGLQKLLVLVMICLTGLPMVFAGGFLPADQAVAQSLGIGTGGVKWLI #oth .1.131.1..21......3..42123.112.1..2151.113323363133223124411 VNG1719 ::::::::::AI::::::F::G::VV:::A::::L:N::QPS:QL:::MPG:AF::EV:: NP4900A :N::EN::::A:::::::T::I::TA::AF::::::-::QPS::::D::::S::ALG:IM hla0854 ::::-:::::V::::::::::VIVTA::AA::::T:E:::::P::G:A:::::F::EA:: HVO_A0174 ::::-::G:::::::::::::FG::A:Q:::I:::::Y::::P:::SA::V:AV:::::: HVO_2541 :::::N::::V::::::::::G::::::::::::::N:::::::::T::::::V:::G:: Hbo2312 ::::-::::::::::::::::V:::::::::::::::::::::Q::::::V:V::::TI: HQ2819A ::::-::::::::::::::::V::::::::::::::S::::S::::D::AV:V::::TI: Hut3032 :::Q:N::::::::::::V::::::V:::F:::::AD::::ESV----M:LP::A::::M rrnAC1589 :N:QD:::::::::::::::::::::::::::::::::::::T:::N::::::A::Q::: Hmu2014 :::Q:N:::::::::::::::::::F::::::::::::::PTSVNLFGMNLSA:ATS::: consensus FAQIFVGGILILFMDEIISKWGVGSGIGLFIIAGVSQQLVGGLFSWPALG---G-TSGFF #oth .2.113..3.2.1...11........1....1.1...2111.133535331113266.23 VNG1719 ::::AA::::L:::::V::::::::::::::V:::::S:::::VF:EGGV:::::SQ:LL NP4900A :L:::L::M:::Y:::V::::::::::::::::::::R:I::FIA:SG:D:::AGYV::: hla0854 :V:::I::V:L::::::V::::::::V::::::A::::I:::F::FS::::::-:A:::: HVO_A0174 :::::A::A:V:::::VV::::::::V::::::::::R::::::AD::I::::AS:T:IV HVO_2541 ::::A:::V::::::::V::::::::V:::::::::::::::::::QG:::::::::::: Hbo2312 :::M:::::::::::::V::::::::V:::::::::::::A:::::Q::::::::::::: HQ2819A :::M:::::::::::::V::::::::V:::::::::::::A:::::QS:::::::Q:::I Hut3032 ::::::::V:::Y:::V::::::::::::::V:::::S:::::I:I:QIA:::::NW::I rrnAC1589 :::M::::V:::::::V::::::::::::::V:::::R:::::LTA:F:::::N:SE:II Hmu2014 ::::A:::::::Y::::::::::::::::::::::::::I::::AH:IF:SPQ::EL::: consensus PTWFGIITGAVEIG-SPLTADGLQDLLLGQGQ-----LLALLTTLLIFGIVVYAESVRVE #oth 34.44323.645533123445134621345141111122213..12.121........1. VNG1719 ::::D::V:N:SNMPPL:SGS:IEF::MQA:-:::::I:G:::::F:YVV:::::::::: NP4900A :R:Y::L::Q::M::PV::QT::F::F::P:E:::::::::I:::::::::::::::::: hla0854 AS:Y:::V:D:PVSL::F::E:::N::FDP:N:::::I:::F:::F:::::::::::::: HVO_A0174 SE:AHVLA:TETVP::LA::S:V:A::F:V:G:::::VVP:V:::::::::::::::::: HVO_2541 A::I::::::I:LPA::--T:L:STVF::::::::::::::I:::::::::::::::::: Hbo2312 ::::::::::A:::::::SPG::S:IF::::::::::::::::::F::::::::::::I: HQ2819A :::V::V::::D:::::::PG::S:VF::::::::::I:::I::VF:::::::::::::: Hut3032 :Y:I:AVF:I:D:P::::::R:MGQ::FHTSGQNYIG:I:I:::VS::V::::::::::: rrnAC1589 Y::YLF:::ERGT::PV:A:::::TV::-::E:::::::G:F::V:::AV:::::::::: Hmu2014 ::::Q::::NIP:::PV:Q:::::E::I:E:::::::VI:::::::::VV:::::::::: consensus IPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRILNSQWAG---------- #oth 1..1111.....................1.....1.1..2.12.2242421111111111 VNG1719 :::::::::::::::::::::::::::::::::::::::::Q::::TL:S:::::::::: NP4900A :::::S:::::::::::::::::::::::::::::::::::::::N:::::::::::::: hla0854 :::::::::::::::::::::::::::::::::::::::::QL:S::::::::::::::: HVO_A0174 ::::::::::::::::::::::::::::F:::::::V::V:::::::::::::::::::: HVO_2541 ::::::::::::::::::::::::::::::::::::::::::F:::S:V::::::::::: Hbo2312 V::::S:::::::::::::::::::::::::::::::::::Q:::N-:T::::::::::: HQ2819A :::A::N::::::::::::::::::::::::::::::::::Q:::NW:S::::::::::: Hut3032 ::::::::::::::::::::::::::::::::::M::::M::L::::LG::::::::::: rrnAC1589 ::::N::::::::::::::::::::::::::::::::::::::::A:LGS:::::::::: Hmu2014 ::::N:::::::::::::::::::::::::::::::::::::::V::TGQNGVISLFGME consensus MPAWLGVYS-SGQ----VTGGLFYYLAPIQSRQDWMWFLG--GTSQDPWQILIRVGIDLT #oth 1.421.4.443222212221..111.2..21163.1.1342273223224134.231..4 VNG1719 ::T:::::GGN::::::::::::::::::Y:PNA:::WTS:::ATAAR::V:::IA:::S NP4900A :::VI:E::G:E:GFAEP:::::::::::Y:PE::::W::::E:AAA::::ML:::V::: hla0854 ::G:::::GNQ::::::PLS::::::N:::A:T:::::::EIPA:VE::M:AV:LI:::: HVO_A0174 ::::::Q:T:::::::::::::::::N::HAPSQ:::W::::SA::E:::::V::A:::: HVO_2541 ::::::Q:T:::::::::::::L:::::::::S:::::::::L::A::LD:A:::L:::I Hbo2312 L:::::T:::D:A:::::::::::::::::::A:::::::::Y:::::A:::L::L:::A HQ2819A ::L:::E:T:Q::::::::::::W::::::::::::::::::F:::E:LA:IA::L:::: Hut3032 L:::::A:NDN::::::AVS:::::::::::P:E:A::VFGGQIT::V:::M::::V::: rrnAC1589 :::F::T:A:N::::::P::::::F:::::::G::::W:E::::A:PV::::T::::::F Hmu2014 L:-::::::I:QGSPASP::::::::S::YAP:::::WA-::YST:::LNV:L:::V::: consensus FMIVGGAIFAIFWVETTDMGPEATARQIQNSGMQIPGFRRNPQVIEKVMERYIPQVTVIG #oth 2.22..11.11.....11...31..3..11.........212123.2.11........1. VNG1719 :::I::::::::::::A::::D:::::::::::::::::K:QG::::::::::::::::: NP4900A ::::::G::::::::::G:::R:::E:::R:::::::::Q::GTT:::L::::::::::: hla0854 ::V::::::::::::::G:::::::K::::::::::::::::::V::::::::::::::: HVO_A0174 L:L::::::S::::::A:::::::::::::::::::::::::::::R:::::::::::V: HVO_2541 :::::::V:::::::::G:::KS::Q::::::::::::::::::::R::::::::::::: Hbo2312 :::::::V:::::::::G::::S::E:::::::::::::::::I::Q::::::::::::: HQ2819A :::A:::V:::::::::G:::::::::::::::::::::::::::::::::::::::::: Hut3032 :::I::::::V::::::::::::::Q:::::::::::::QS:G:L:::LG:::::::::: rrnAC1589 V:L::::V::V::::::::::::::K::H::::::::::Q:VG:::::L::::::::::: Hmu2014 :::::::::::::::::::::::::K::H::::::::::Q:VG:V:::L::::::::::: consensus GALVGLLAVMANMLGTIGGVSGTGLLLTVSITYKLYEEIAEEQLMEMHPMMRQMFG--- #oth .2.......1..1...1.4.1..1...11..............1........3...521 VNG1719 ::::::::::::::::::N:::::::::I::::::::::::::M::::::::E:::GGD NP4900A ::::::::::::::::::Q:T:::::::::::::::::::::::::::::::E:::::: hla0854 ::::::::::::L:::::Q::::::::A::::::::::::::::::::::::::::NE: HVO_A0174 :V:::::::::::::::::::::S::::::::::::::::::::::::::::T:::G:: HVO_2541 ::::::::::::::::::A:::::::::::::::::::::::::::::::::N:::SE: Hbo2312 ::::::::::::::::::S:::::::::::::::::::::::::::::::::::::E:: HQ2819A :G:::::::L::::::::::::::::::::::::::::::::::::::::::::::D:: Hut3032 ::::::::::::::::V:::T:::::::::::::::::::::::::::::::::::::: rrnAC1589 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2014 ::::::::::::::::V::::::::::::::::::::::::::::::::::::::::::