|
Pairwise sequence scores | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 5626 | Hut0669 | VNG1624 | hla1726 | Hbo2143 | HQ2736A | HVO_2436 | HVO_2158 | Hbo3388 | NP0132A | NP1772A | rrnAC1754 | Hmu2110 |
4384 | Hut0669 | 5600 | 4027 | 4049 | 4133 | 4101 | 4020 | 4006 | 3951 | 4039 | 4200 | 4212 | 4303 |
4670 | VNG1624 | 4027 | 5618 | 4383 | 4397 | 4185 | 4375 | 4177 | 4179 | 4332 | 4441 | 4423 | 4401 |
4814 | hla1726 | 4049 | 4383 | 5742 | 4557 | 4342 | 4569 | 4353 | 4341 | 4215 | 4390 | 4498 | 4456 |
4952 | Hbo2143 | 4133 | 4397 | 4557 | 5613 | 4809 | 4725 | 4532 | 4444 | 4372 | 4546 | 4561 | 4502 |
4763 | HQ2736A | 4101 | 4185 | 4342 | 4809 | 5567 | 4577 | 4411 | 4275 | 4282 | 4390 | 4407 | 4386 |
4924 | HVO_2436 | 4020 | 4375 | 4569 | 4725 | 4577 | 5615 | 4724 | 4593 | 4368 | 4508 | 4490 | 4399 |
4843 | HVO_2158 | 4006 | 4177 | 4353 | 4532 | 4411 | 4724 | 5629 | 4862 | 4430 | 4385 | 4422 | 4316 |
4742 | Hbo3388 | 3951 | 4179 | 4341 | 4444 | 4275 | 4593 | 4862 | 5635 | 4319 | 4301 | 4355 | 4260 |
4753 | NP0132A | 4039 | 4332 | 4215 | 4372 | 4282 | 4368 | 4430 | 4319 | 5681 | 4803 | 4359 | 4362 |
4911 | NP1772A | 4200 | 4441 | 4390 | 4546 | 4390 | 4508 | 4385 | 4301 | 4803 | 5649 | 4605 | 4639 |
4866 | rrnAC1754 | 4212 | 4423 | 4498 | 4561 | 4407 | 4490 | 4422 | 4355 | 4359 | 4605 | 5605 | 4710 |
4853 | Hmu2110 | 4303 | 4401 | 4456 | 4502 | 4386 | 4399 | 4316 | 4260 | 4362 | 4639 | 4710 | 5610 |
781 symbols consensus ---------------------MGLDDDAREYHRRDPPGKIEIATTKPTNTQRDLSLAYSP #oth 111111111111111111111.1.21.112..345.2..21.2...1............. Hut0669 ::::::::::::::::::::::::EE::LD::Q:E::::L:::::::::::::::::::: VNG1624 ::::::::::::::::::::::::::::LD::AS:::::V::S::::::::::::::::: hla1726 MSNQYSTGSHTFLLRYRIGGD:::::::::::::E:::::A:E::::::::::::::::: Hbo2143 :::::::::::::::::::::::::::::::::EE:::::::S:::S::::::::::::: HQ2736A ::::::::::::::::::::::::E::::D:::E::S::L::S::::::::::::::::: HVO_2436 :::::::::::::::::::::::::::S:K:::Q:::::::::::::::::::::::::: HVO_2158 ::::::::::::::::::::::T:G::::D::::P:A::V:::::::::::::::::::: Hbo3388 ::::::::::::::::::::::T:E:::::::::I::::V:::::::::::::::::::: NP0132A ::::::::::::::::::::::::EE::L::::T:::::L::S::::::::::::::::: NP1772A :::::::::::::::::::::::::E:SL::::QE::::L::S::::::::::::::::: rrnAC1754 :::::::::::::::::::::::::E::L::::SK::::::::::::::::::::::::: Hmu2110 :::::::::::::::::::::::::E::LD::G:A::::::::::::::::::::::::: consensus GVAAPCRDIAEDPEAAYEYTAKGNLVGVVSNGSAVLGLGDIGAQASKPVMEGKGVLFKRF #oth ...2..42.2333462132.21..1.1...1.1.1.......13.2.............. Hut0669 :::G:::E:DA::AD:F:::::::::A:::D:::T:::::::PL:::::::::::::::: VNG1624 :::::::A::D::TE:FTH:T:::M::::::::::::::::::::A:::::::::::::: hla1726 ::::::::::AE::SVF:::::::::A::::::::::::::::S:::::::::::::::: Hbo2143 ::::::::::D:ADR::::::::::::::::::::::::::::::::::::::::::::: HQ2736A ::::::::::::STRG::::::::::A::::::::::::::::::::::::::::::::: HVO_2436 ::::::L:::::ED:::::::::::::::::::::::::::::::::::::::::::::: HVO_2158 ::::::::::::EN:::::::::::::::::::::::::::::::::::::::::::::: Hbo3388 :::T:::::::N::Q::RN:V::::::::::::::::::::::::::::::::::::::: NP0132A ::::::SE::D::::::T::T:::M:::::::T::::::::::::::::::::::::::: NP1772A ::::::TE::D:::D::T::T:::M:::::::T::::::::::::::::::::::::::: rrnAC1754 ::::::EE:DK:::K:F:::::::::::::D:::::::::::PE:G:::::::::::::: Hmu2110 ::::::EA:H:T::D:FK:::R::::A:::D:::::::::::PE:::::::::::::::: consensus ADIDVFDIELDLDDPDAFIEAVAAMEPTFGGINLEDIKAPECFEIERRLREEMDIPVFHD #oth .......2.2.623246345314111.....1.....41.1..21.35.315111..... Hut0669 :::::::L:V:A:::ERM:DV:E:L::::::V:::::G::A::T::K::Q:SLS:::::: VNG1624 :::::::::::QATA:ELVAT:S:::::::::::::::::::::V::::GDA::V::::: hla1726 :::::::::::IEEV:P:C:::K::::::::V:::::::::::K::E:::::::V::::: Hbo2143 :::::::V::::E::ESI::T:S:::::::::::::::::::::::S::::::SV::::: HQ2736A :::::::L::::A::TDI:NS:S:::::::::::::::::::::::SQ:::::::::::: HVO_2436 :::::::V:::IA:V:D:VA:TK::::::::::::::::::::::::Q:::Q:::::::: HVO_2158 :::::::V:F:H:::Q::V:S::::::::::::::::R::::::::ES:::R:::::::: Hbo3388 ::::::::::::::::T:TQ::::::::::::::::::::::::::SD:S:R:::::::: NP0132A :::::::::::E:::A::A:S::R:::::::::::::SG:::::::SY:::Q:::::::: NP1772A :::::::::::Q::::DIVTS:K:::::::::::::::::::::V:E::::::::::::: rrnAC1754 :::::::V:::T:NAE:M:QT:E::::::::::::::A::::::V::::S:KL::::::: Hmu2110 :::::::L:::T:::::M::::D::G:::::::::::A::A::::::E:::R::V::::: consensus DQHGTAIISGAALLNAADIADKDLSELNIVFSGAGASAIATARFYVSLGVKKENITMCDS #oth ........1....3..31.31.31232311.1....1.211.2.12...25422.211.1 Hut0669 ::::::::T:::::::I::LG::::::EV:::::::::::::::FE::::PGSA:::V:: VNG1624 :::::::::::::::::E::G::::D:DV:::::::::::::K:::::::DR:H:::::: hla1726 :::::::::::::M::TE:SG:::::ID::::::::::::S::::::::A:::::::::: Hbo2143 :::::::::::::::::::V::::ED:::::::::::::::::::::::AR::::V:::: HQ2736A :::::::::::::::::::V:::::::::::::::::::S:::::L:::A:::::I:::: HVO_2436 :::::::::::::::::::V::::D::D::::::::::L::::::::::A:::::::::: HVO_2158 ::::::::::::::::::::::E::S::VT::::::A:T::::::::::IPH::::L::I Hbo3388 :::::::::::::Q:::::VG:N::D:HVT:A::::A:T::::::::::IPR:::::::I NP0132A ::::::::::::::::CE::::SI:D:::T::::::A:T:::E:::::::AP:::::::I NP1772A ::::::::::::::::CE::::S:EN:E::::::::::::::::::::::DPD::::::: rrnAC1754 :::::::::::::V::::::::E:D::EV:::::::::::S:K:::::::S:D::::::: Hmu2110 :::::::::::::::::::V::E:E:ME::::::::::::S:::::::::R::::::::: consensus SGIITEDRVEAGDLNEYKAEFASDVD-GGDLADAMEGADVFVGLSVGGIVSQEMVRSMAD #oth 2.12143.244333232333..83441324.21.221..111...11.2.2311121..3 Hut0669 G::V:DE::D:::V::::::::TEGP:A:::::::A::::::::::S:::DGA::A:::A VNG1624 ::V:::::----:V::F::A::QPA:S::::::::A::::::::::::::N:A::::::: hla1726 ::::::E:::N:GV::::SQ:::::E::::::::::D::::::::::::::::::::::S Hbo2143 D:V::P::---E:I::F:::::N::P:ADT::E::::::::::::I::L:D::::A:::: HQ2736A ::V:SS::---ES::R::S:::A::P:AET::E::::::::::::::::::E::IA:::A HVO_2436 ::::::S:::D::V:K::::::KP:::E:S:S::::::::LA:::::::::::::::::: HVO_2158 D:VLS:S:A:::E:D::AEP::RG:::D:::E::::::::L::::::::::::T:::::: Hbo3388 D::LS:A:A:::::::FTEP::CGE::D:E:E::::::::::::::::::::::::T::: NP0132A D::::::::AND:PHS:VEP::EPA-::::::::IA:::::::::::::::P:::Q:::E NP1772A ::::::S:AD::E::KH:Q::::EG::::::::::A::::::::::::L:D::::Q:::E rrnAC1754 ::::::E:ANHEE::RF:Q:::R:IP:E:G:::::D::::::::::::::D::::::::S Hmu2110 :::::A::::NDG::R:::::::EGT::::::::LA:::A::::::::V:DEA::::::S consensus DPIIFAMANPDPEIGYEDAKAARDDTVIMATGRSDYPNQVNNVLGFPFIFRGALDVRATE #oth 2.11.1....1...3.24..4.111.111.........1.........1......1..12 Hut0669 :::V:P::::::::D:D:::::GEG:T:V::::::::::::::::::::::::::A::RT VNG1624 :::V::::::::::D::S:::::E:::::::::::::::::::::::::::::::::::D hla1726 ::::::::::::::T:::::D:::::::::::::::::M:::::::::L::::::::::: Hbo2143 :::::::::::::::::E:::::::::::::::::::::::::::::::::::::::::: HQ2736A :::V::::::::::::VE::N::::::V:::::::::::::::::::::::::::::::: HVO_2436 N:V:::::::::::T:::::D::::::::::::::::::::::::::::::::::::::: HVO_2158 ::::::::::E:::A:::::E::::::::::::::::::::::::::::::::::::::: Hbo3388 ::::::::::::::T:::::D::::::::::::::::::::::::::::::::::::::: NP0132A ::::::::::E::::::A::Q::::::::::::::::::::::::::::::::::::::: NP1772A :::::::::::::::::A::Q::::::::::::::::::::::::::::::::::A:::: rrnAC1754 ::::::::::::::A::::::::::::::::::::::::::::::::::::::::::::: Hmu2110 E:::::::::::::D::T:::::::::::::::::::::::::::::::::::::::::: consensus INEEMKVAAAEALADLARQDVPDAVVKAYGDQPLQFGPEYIIPKPLDPRVLFEVAPAVAE #oth ..13..2...4...4..12....1......14.1.1.22.2....1.1...1..211..4 Hut0669 ::::::::::::::A:::E::::::::::::E:I::::::V::::::::::::::::::R VNG1624 ::::::::::T::::::K:::::E:::::::::::::S:::::::::::::::::::::D hla1726 ::::::R:::::::E:::K::::::::::::D:::::AD:V:::::::::::::::S::K Hbo2143 ::::::R:::K:::::::K::::::::::::::::Y::::V::::::::::::::::::Q HQ2736A :::T::R:::::::::::::::::::::::E:::::::::L::::V:::::::::::::Q HVO_2436 :::A::R:::::::E::::::::::::::::H:::::AD:V::::::::::::::::::Q HVO_2158 ::::::R:::::::N::::::::::::::::G::::::D:L::::::Q:::Y::T::::: Hbo3388 ::::::L:::D:::::::E::::::::::::E::::::D:L::::::Q:::Y::T::::R NP0132A ::Q:::::::::::N::K::::::::::::::::::::::::::::::::::::SG:::: NP1772A :::K:::::::::::::K:::::::::::::::::::::::::::::::::::::::::: rrnAC1754 ::::::::::R::::::::::::E::::::::::::::N:::::::::::::::T::::: Hmu2110 ::::::::::R:::R:::::::::::::::::::::::::::::::::::::::T::::: consensus AAMESGAARTELDLDAYREELEARLGKSREMMRVVLNKAKSDPKRVALAEGDDEKMIRAA #oth ..132131.533.245.3.3.......1.....112...2.211.21.1..512121... Hut0669 ::I:::VS:R:P:::T:V:S:::::::A:::::II::::::::Q::V::::A:DT::::: VNG1624 ::::T:V:::::::VD:::::::::::::::::I:I:::::EQQ:I::G::G:::::::: hla1726 :::D:ES::::I::EQ:::R:::::::::::::::::::::::::I:::::T:::::::: Hbo2143 :::D::S::S:::T:E:E:R:::::::::::::::::::::::::::::::T:::::::: HQ2736A ::I:::C::RDI:T:I:E:Q:::::::::::::::::::::N:::::::::H:::I:::: HVO_2436 :::T:::::ER::MN::::::::::::::::::::::::::N:::::::::E:::::::: HVO_2158 :::K:::::R:R:::D:::::::::::::::::::::::A:N::::V::::E:::::::: Hbo3388 ::I::::::::R:::::::::::::::::::::::M:::Q:::::::::::EN::T:::: NP0132A ::::::V::DD::::T:::::::::::::::::::::::::E:::LV::::::P:::::: NP1772A ::::C::::DD::::::A:R:::::::::::::::::::::::::LV:::::::::V::: rrnAC1754 ::I::::::::::TA::V:::::::::::::::::::::::::Q::V::::H:::::::: Hmu2110 :::D:::::KSI:::D:V:R::::::::::::::::::::::::::V::::::::::::: consensus YQLVEQGIAEPILVGDRDEILRTADRLGLDFDPEIVDPEEGDWDHYADRLYELRQRKGVT #oth 2.1514...4.1.2.3357.85535511.3.3.3111.5545345.314.122.2.1.3. Hut0669 :::LDR:::D:::::::T::RSS::::::S:::T::::GGDAV:C:::::::::K::::: VNG1624 H:MH:A:::D:V:L::::T:QG:V:A:S:::::DV:::D:::HSA:::T::D::K:::I: hla1726 :::S:::::::V:L::A:::A::::::::S:Q:::::::NR:VSA:G:Q::Q::K:::I: Hbo2143 :::Q:::::Y:V:::N:EK:NQ::E::::::E::VA::RN::::::::::::::R:::M: HQ2736A ::MH:::::Q::::::KS::VA::SE:::E:G::::::SDET::::T:::::::R::::: HVO_2436 ::MQ:E:::::::::ETTT:::K:EE:::::::T:AN:RD:E::::V::::::::::::: HVO_2158 S::::E:::::::::RTK::::::ED:::::::T:A:::S:E:N::V:H:::R:::::L: Hbo3388 S::::D:::::V:I:R::H::QKTEE:::::::VV:N:R::E:T::V:Y:::H:::::L: NP0132A :::::::::H::::::KRA:WEQ:AE::::::::::::ATDEL:P::E::::::K:N::: NP1772A ::::D::::H:::I::K:V:WEH:Q::::::E:::::::::NL:P::E::H::::::::: rrnAC1754 :::::::::::::I::A:Q:ES:RRKF::E:::VV::::TA:VAD::::::::::::::: Hmu2110 :::I:::::::V:L::::R:SAIT:T:::A:E::::::D::GL:E::::::::::::::: consensus RREADELVR-DGNYLASVMVEMGDADAMLTGLTHHYPSALRPPLQVIGTADDADYAAGVY #oth 34..52124313.111.2..161.1..1...112...1..1.1.111.11322221.... Hut0669 :D::R::LT::::::::A:::T:::::::::A:D::::::::L:E:V:::P::EF::::: VNG1624 :N::ES::AR:P:::G:T:::A:::::F::::::::::::K:::::V:::P:T::V:::: hla1726 S:::N::::R:T:::G::::KS::V:::::::::::::::::::::V:S:A:T:TV:::: Hbo2143 KN::H::I:R:T::F::::::EN:::::::::::::::::::::::::::P::::::::: HQ2736A :N::E::ISGNS::F::::::Q::::::::::::::::::::::::::::PE:::::::: HVO_2436 NS::E::::R:S::F::::::V:::::::::::::::::::::::I:::::::::::::: HVO_2158 :T::A::::G:S::F::::::V:::::::::::::::::::::::I:::::::::::::: Hbo3388 :T::N::I:Q:S::F::::::::::::::::::N::::::::::::::::EN:N:::::: NP0132A :::::GR::::::::::::::::::::::::::N:::T::::::::V::::::::::::: NP1772A :::::::IK::::H:G::::::::::::::::M::::::::::::I:::D:ESE:::::: rrnAC1754 :::::::I:::::::G:::::::::::::::::::::::::::::::::::::::::::: Hmu2110 ::::::::T::::::G:::::::::::::::::::::::::::::IV:::PE:E:::::: consensus MLTFKNRVVFCADATVNQDPDADVLAEVTKHTAELARRFNVEPRAALLSYSNFGSVDNEG #oth 11..2.1.1.3..1...32.1331.2.1121.121.11..11..1.2....1..1.3342 Hut0669 ::::R:::I:V::::::P::::A::::::::::DV::Q:::::::::::::D::::EDDQ VNG1624 ::::Q:::::::::::::::::::::::AQ:::D:::::::D::V:V::::::::::::: hla1726 ::::::::I::::T::::::::ET:::::R::::::::::::::::M:::::::::::V: Hbo2143 ::::::::I::::::::LA::S:::::I::::::::::::I:::::M:::::::::K::: HQ2736A L:::::Q:::A::T:::LA:E::::::I:::::S::::::I:::::M:::::::::E:D: HVO_2436 :M:::::::::::T:::L:::EE::::I:::::D:::Q::::::::::::::::::T::: HVO_2158 ::::R:::I::::::::L:::EN::::::::::::::::::::::::::::D::::T::: Hbo3388 ::::R::::::::T:::L:::EE:::::::::::::K::::::::::::::D::::ET:: NP0132A ::::::::::V:::::::S::EE:::::AQ:::::::Q:::D::V::::::D::T::::: NP1772A ::::::::::I:::::::S::E:::::::RR::D:::::::::::::::::D:::::::: rrnAC1754 ::::::::I::::T:::::::T:::E:::R::G:::::::::::::M:::::::::::L: Hmu2110 ::::R::::::::T:::T:::::::T:::R::::::::::::::::M::::::::::SPS consensus TRKPRRAVERLRDDPAVDFPVDGEMQADTAVVEDILTGTYEFSDLDEPANVLVFPNLEAG #oth 123214.285.23.2421.1..........12112.322.2.11..31....1..1.... Hut0669 :AI::E:TR::::::S:T:::::::::::::L::A::D::::A:::::::::I::::::: VNG1624 :::::::AQQ::E:DDI:::::::::::::::::::Q:S:::::::TA::::I::::::: hla1726 :::::E::DI:HN:AD::::::::::::::::D:::ND:::::E:::A:::::::::::: Hbo2143 :::::D::KL:H:::E:::D::::::::::::::::E:::::::::D::::::::::::: HQ2736A :KRLQD::TS:H:::::::::::::::::::I:::::E::D::::::::::::::::::: HVO_2436 :::::D:AAL:Q:::E::::::::::::::L:::::E:::D:AE::G::::::::::::: HVO_2158 :::::N:::Q:HA::D::::::::::::::L::EM::D::D:AE::D::::::::::::: Hbo3388 V::::N::NI:H:::D::::::::::::::L::EM::E::::AE::G::::::::::::: NP0132A :::::Q:A:M::::D::::::::::::::::::EM:::D:S:A::::::::::::::::: NP1772A :::::::A:M::::D:::::::::::::::::::A:Q:::D::::::::::::::::::: rrnAC1754 :K:I::::S::Q::DR::::::::::::::::::::QD:::::E::D::::::::::::: Hmu2110 ::A::::A::::E:::T:::::::::::::::::::Q::::::E::D::::::::S:::: consensus NIGYKLLQRLGGAEAIGPMLVGMDKPVHVLQRGDEVKDIVNLAGVAVVDAQNE------- #oth .11..1..1....1.1....1..12..1.1....1.1....1.21.11...444211111 Hut0669 :VA:::::Q::::D:V::::A:::R::::V::::D:E::::::::::::::S:P:::::: VNG1624 :::::::::::::D:::::::::N:::::::::::::::::::A::AA:::QRED::::: hla1726 ::::::::::::::::::::::::E::::::::::::::::::S:::::::E-::::::: Hbo2143 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2736A ::::::::::::::::::::::::::::::::::::::::::::::::::::D::::::: HVO_2436 :::::::::::::::::::::::::::::::::::::::::::AT::::::E:::::::: HVO_2158 :::::::::::::::::::::::::::::::::::::::::::::::::::S:::::::: Hbo3388 :::::V:::::::::::::::::::::Y:::::::::::::::S:::::::E-::::::: NP0132A ::A::::::::::::::::::::::::::::::::::::::::S::::::::DASVDSIQ NP1772A ::A::::::::::::::::::::::::::::::::::::::::::::::::SNG:::::: rrnAC1754 :::::::::::::::::::::::::::::::::::::::::::::::::::Q:::::::: Hmu2110 :::::::::::::::::::::::::::::::::::::::::M:::::::::DD::::::: consensus - #oth 1 Hut0669 : VNG1624 : hla1726 : Hbo2143 : HQ2736A : HVO_2436 : HVO_2158 : Hbo3388 : NP0132A H NP1772A : rrnAC1754 : Hmu2110 :