Home |  Text search
[F] (Cdd) COG0295 Cytidine deaminase
9 genomes BUD0762 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0896

rrnAC0446

HVO_1581

Hbo3463

Hmu1120

Hut2086

hla2390

NP3512A

HQ2646A

Pairwise sequence scores
Consensus score1002 Hut2086 HQ2646A NP3512A VNG0896 rrnAC0446 Hmu1120 hla2390 HVO_1581 Hbo3463
605Hut2086 1003 516 534 546 572 504 527 519 507
701HQ2646A 516 1024 614 618 608 646 643 663 672
744NP3512A 534 614 987 670 652 666 658 632 641
711VNG0896 546 618 670 996 625 635 667 627 620
750rrnAC0446 572 608 652 625 974 714 661 669 654
733Hmu1120 504 646 666 635 714 979 694 673 685
832hla2390 527 643 658 667 661 694 1003 743 779
809HVO_1581 519 663 632 627 669 673 743 1057 891
836Hbo3463 507 672 641 620 654 685 779 891 1030

145 symbols
consensus       ---DDEDLIDAARDALEDAYVPYSEYRVGAALETADGAVYTGCNIENANYSNSLHAEEVA
#oth            1123553.231.131425121.....5....13.22.3.13.1.1.11.....1....1.
Hut2086         ::M:ERA:L:::T:::::::::::::P:::::::TA:E::R:F:V:VV::::::::::::
HQ2646A         MMSS:HT::AR::T:F:S:::::::::::::I::T::S::::::::::::::::::::::
NP3512A         ::M::A:::::::K:V:QS:A:::::Y::::IA::::::FS::::::::::::V::::L:
VNG0896         ::M:TD::LA:::::TAA:H::::::K:::::D::S::::::::::::::::::::::::
rrnAC0446       :::-M:::L::::::IDE::A:::::T:::::::S::S::::::::::::::::::::::
Hmu1120         :::-MDS:VE:::T:V:ESFA:::::G::::I::::::::::::V:::::::::::::::
hla2390         :::--M:::E::::::D::H::::::::::::R::::T::::::::::::::::::::::
HVO_1581        :::MP:A:VER::E::DN::::::::T:::::R::::E::V:::::::::::::::::::
Hbo3463         :::MP:S:VTR::EM::Q:H::::::::::::R::::E:FV:::::::::::::::::::

consensus       VAEAVKAGHREFDRIAVTSGARDGVTPCGMCRQTLAEFCDDDLEVVCDEGGD--ETTEYT
#oth            234.242.333.2.21.3.351.11........113..12211612115233112443.2
Hut2086         LTG:LR::ESD:E:V::V:AEH::L::::::::::::::A:SF:ILTEDD:-:::I:H::
HQ2646A         ::A:::D:QDT:E::::A:A::::::::::::::::::A:GS:K:L::K:AE::GVET::
NP3512A         LSK::E::::S::::::S:AR::::::::::::S:::::G:::RII::-:P:::GRV:::
VNG0896         :GK::S::DTD:Q:L::::SQ::A::::::::::::::AA:::TIL::S:D:TAGVVT::
rrnAC0446       IGA::SD:::S:E:V:::::K:::::::::::::FS::::ESF:IIT:--:::::P:V:E
Hmu1120         :GS::AD:::::E::::S:D:::::::::::::::I:::::::P::::::DG:::::T:Q
hla2390         L:::::N:::::::::::::V::::::::::::S:T::AA:::I::::::DG::::S:::
HVO_1581        ::::::N::T::::LV::::::::::::::::::::::::E::P::::L:::::DVA:::
Hbo3463         ::::I:N:::::::L:::::::::::::::::::::::::E::V:::::::E::::::::

consensus       LGELLPNTISADTLDAA--------
#oth            .11.1.5112532.24253412111
Hut2086         ::D:::AAMKPGN:QDRS:::::::
HQ2646A         :T::::K:::EE::QN:DGQ:::::
NP3512A         ::::::E::T:SH:Q--::::::::
VNG0896         ::::::D::T:SN:::-::::::::
rrnAC0446       ::::::T::TS:H::K-::::::::
Hmu1120         ::::I:A::TQEH:E--::::::::
hla2390         ::::::::::E::::D:REV:::::
HVO_1581        ::::::::::L:::E::AAKRDADE
Hbo3463         ::::::::::L:::E::EAERE:::