Home |  Text search
[H] (LipA) COG0320 Lipoate synthase
7 genomes BUD1181 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2216

rrnAC2959

HVO_2957

Hbo1577

Hbo3928

Hmu3189

-

hla1158

NP0562A

-

Pairwise sequence scores
Consensus score2418 NP0562A Hbo3928 hla1158 VNG2216 HVO_2957 Hbo1577 rrnAC2959 Hmu3189
1990NP0562A 2398 1841 1885 1850 1887 1818 1913 1850
2108Hbo3928 1841 3161 1988 1936 2028 1958 1950 1941
2058hla1158 1885 1988 2439 1909 2002 1921 1917 1931
2117VNG2216 1850 1936 1909 2401 2000 1999 1972 1948
2229HVO_2957 1887 2028 2002 2000 2421 2073 2018 1948
2151Hbo1577 1818 1958 1921 1999 2073 2327 1950 1936
2137rrnAC2959 1913 1950 1917 1972 2018 1950 2422 2054
2090Hmu3189 1850 1941 1931 1948 1948 1936 2054 2398

405 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
NP0562A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3928         MFLIRDCRTHQQIKRTSVNGRKNEIGRNTLEAVNSQTMPQFPTLKNQRKQLINWWRISER
hla1158         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG2216         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2957        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo1577         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2959       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu3189         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ----------------------------------MSRRRKPDWLKMRPPSGRRFTDIKQT
#oth            1111111111111111111111111111111112334311121122.....2...1..22
NP0562A         :::::::::::::::::::::::::::::::::MS::::::E::RT:::::::::E::E:
Hbo3928         IRGILIESTVYVRIALRSLQPHPQFYHGTTEAFG:TS::::::::::::::::::E:::S
hla1158         :::::::::::::::::::::::::::::::::MQRG::::::::S:::::S:::E::ER
VNG2216         ::::::::::::::::::::::::::::::::::::S::::E:::::::::E::::::E:
HVO_2957        :::::::::::::::::::::::::::::::::::RT:::::::::::::::::::::S:
Hbo1577         ::::::::::::::::::::::::::::::::::-----------:::::::::::::::
rrnAC2959       :::::::::::::::::::::::::::::::::::::S:::::::::::::E::::::::
Hmu3189         :::::::::::::::::::::::::::::::::::::A:::::::S:::::::::E:::S

consensus       LRDRDLHTVCEEANCPNLGECWSGRDGPGTATFMLMGDRCSRGCNFCDVETGGMEPLDPD
#oth            ..121.1......1...1.1....2..........1.............4....31..1.
NP0562A         ::::::N::::::::::::D:::::::::::::::L:::::::::::::A::::D:::::
Hbo3928         :::H::::::::::::::::::::H:::::::::::::::::::::::::::::S:::::
hla1158         ::E::::::::::::::M::::::::::::::::::::::::::::::::::::KS::S:
VNG2216         :::N:::::::::S:::M:::::::::::::::::::::::::::::::K::::::::::
HVO_2957        ::::N:N::::::::::::::::::::::::::::::::::::::::::T::::::::S:
Hbo1577         :::::::::::::::::M:::::::::::::::::::::::::::::::Q::::::::::
rrnAC2959       ::::N:N:::::::::::::::::::::::::::::::::::::::::::::::D:::::
Hmu3189         ::E::::::::::::::M::::::E:::::::::::::::::::::::::::::::::::

consensus       EPANVADAVAEIGLDYVVLTSVDRDDLPDQGAGHFAETIREIKRRDPSILVEVLIPDFQG
#oth            ..31..21.21................2.1.13...2...1.12..111...3.1...1.
NP0562A         ::::::E::::::::::::::::::::D:G::::::::::::::::T:V:::A:::::::
Hbo3928         ::S::::::S:::::::::::::::::A:G:SA:::::::::::::::::::::T:::::
hla1158         ::E::::::::::::::::::::::::A:G:SE:::::::::Q::::E::::T:::::::
VNG2216         ::::::ES:::::::::::::::::::D::::::::R::::::E::::::::::::::::
HVO_2957        :::::::::T::::::::::::::::::::::A::::::::::::::EV:::::::::::
Hbo1577         ::::::A:::::::::::::::::::::::::S:::Q::::::Q::::::::::::::::
rrnAC2959       ::QQ::::::::::::::::::::::::::::S:::::::A::E::::::::C:::::::
Hmu3189         ::E:::::::D:::::::::::::::::::::::::::::A::E::::::::C:::::R:

consensus       DPDAVRKIIDAGPDVIAHNIETVERLQWPVRDRRAGYEQSLSVLRQVNRESDIYTKTSLM
#oth            2332132.1..2...2...1...4.1.1.1.....2.1.1.2..42252111212...2.
NP0562A         :T:::DR::::D:::V:::V:::::::::::::::::::::D::::IAAADGC:A:::::
Hbo3928         S::::QR:L::::::F:::::::N:::::::::::D:D:T:D::Q:A:D:::V:::::I:
hla1158         ::E:IDR::::::::::::V:::::::::::::::D:::::A::DR:G:::::H::::::
VNG2216         EKSL:Q:::::::::::::::::A:R:V::::::::::::::::EY:T::::::::::I:
HVO_2957        ::EH:::::::::::::::::::::::::I::::::::::::::Q::TD::::H::::V:
Hbo1577         :EE::::::::K:::::::::::::::::::::::N::::::::E::K::::::::::I:
rrnAC2959       E::L:::::::D:::::::::::D::::::::::::::::::::::::::::C:S:::::
Hmu3189         EERL:EQ::::::::::::V:::Q::::::::::::::::::::G::D::::::::::::

consensus       LGVGEYAHEVYQTLSDLREAGVDVVTLGQYLQPSRSHLDVFEYVHPDAFETWRRVAEDEF
#oth            ..1..12..1.1..1..1111..1..1........1..1.21..1.13.11.231..5.2
NP0562A         :::::::::::R::G::S:V:::I::F:::::::::::E:::::T::T:DV:K::::T::
Hbo3928         ::L:::H::::::::::::V:::I:::::::::::::::::::::::V:::::DI::E:M
hla1158         ::::::D::::R::G::S:V::::::F::::::::::::::::::::V:::::A:::R::
VNG2216         ::::::D:::::::G:::::::::::::::::::::::::AD::::QK::::Q::::S::
HVO_2957        ::L::H::::::::::::::D::I::F::::::::::::::::::::::::::::::::L
Hbo1577         ::L:::D::I::::::::::D::::::::::::::T:::::::::::::::::Q:::::L
rrnAC2959       ::::::::::::::::::Q:::::::F:::::::::::E:S::::::::D::QQ:::A::
Hmu3189         :::::::::I:::::::::V::::::::::::::::::E:S::::::::D:::::::E:L

consensus       GFLYCASGPMVRSSYKAGELFVDALLREGKSVEEARRAARAAAG-
#oth            2.1...........11......112212.41334..341133434
NP0562A         ::::::::::::::F:::::::E::E:D:LDI:A::A::ERQ--:
Hbo3928         E:::::::::::::::::::::::::::::::AQ::KR::VNGD:
hla1158         D:::::::::::::::::::::E::::::R:P:D:::H::::G:D
VNG2216         ::::::::::::::::::::::::V:::::::Q::::N::R::SE
HVO_2957        :::::::::::::::::::::::::::::S::::::Q:::::::Q
Hbo1577         ::::::::::::::::::::::::IV:D:::::Q:::E::T:::S
rrnAC2959       D::::::::::::::R::::::ESV::::R:AD:::AEV::ND-:
Hmu3189         ::A::::::::::::R::::::E:V:-A:NDPAI:::R:::EE-: