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[L] (UvrC) COG0322 Nuclease subunit of the excinuclease complex
9 genomes BUD0286 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2381

rrnAC3041

HVO_3006

Hbo1510

Hmu2795

Hut0297

hla0568

NP1086A

HQ3694A

Pairwise sequence scores
Consensus score4392 NP1086A HQ3694A VNG2381 Hut0297 hla0568 HVO_3006 Hbo1510 rrnAC3041 Hmu2795
3328NP1086A 4315 2740 2853 2950 2992 3032 3064 3040 2960
3331HQ3694A 2740 4417 2878 2845 2927 3027 3136 2877 2930
3340VNG2381 2853 2878 4451 2996 2951 3110 3057 3030 2836
3383Hut0297 2950 2845 2996 4403 3013 3025 3144 3061 2991
3646hla0568 2992 2927 2951 3013 4498 3308 3371 3266 3194
3705HVO_3006 3032 3027 3110 3025 3308 4385 3671 3181 3140
3824Hbo1510 3064 3136 3057 3144 3371 3671 4413 3241 3276
3557rrnAC3041 3040 2877 3030 3061 3266 3181 3241 4431 3386
3507Hmu2795 2960 2930 2836 2991 3194 3140 3276 3386 4375

617 symbols
consensus       MDADEVRERAADLPAEPGVYQFL----AGRT----VLYVGKAVDLRDRVRSYADPRSERI
#oth            .24431131.44..31....2.311113245233211.....121.3.....21..13..
NP1086A         :::SA::K:::E::::::::::E::::::ES:::::::::::::::E:::::VA:::D::
HQ3694A         :KQR:L:::::E:::::::::::::::EDN::::::R:::::LE::::::::::::::::
VNG2381         :NG::::A::SE::::::::::VARDPD:TADGER:::::::::I:::::::G:::::::
Hut0297         ::SA:::T::G:::T::::::::::::DSTRGDAT:::::::::::::::::::::G:::
hla0568         ::::A:::::::::T:::::::R::::::E:::::T:::::::N::N::::::::::G::
HVO_3006        ::PAA:S:::SA::SD::::::V::::::DA:::::::::::::I:A:::::::::::::
Hbo1510         :::SD:::::T:::TD:::::::::::D:D::::::::::::::I:A:::::::::G:::
rrnAC3041       ::::::::::GS::R:::::L:E::::Q::DDKRR:::::::::::::::::::::::::
Hmu2795         :::TG:::A:DV::R:::::H:V:::::D:-::::::::::::::::::::::::::A::

consensus       RRMVERADDIDFAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPLVQLTDH-PVPRI
#oth            23..31.3512221.1...........11..21.1.....1........13.3.132...
NP1086A         :::::A:AAV::::::::::::::::::::::::::::::::::::::::::A::EA:::
HQ3694A         :Q::A::::::I:L:E::::::::::::::::::::::::::::::::::F:N::S::::
VNG2381         AG::A::::VTV::::::::::::::::V:::::::::::::::::::::V:S:REA:::
Hut0297         :::::::A:::VV::::::::::::::F:::Y::::::::R:::::::::::::::T:::
hla0568         :G::G:::R:E::::::::::::::::::::LR::::::::::::::::AI:::::::::
HVO_3006        S:::D::EH:::::::::::::::::::::::::::::::::::::::::::A::A::::
Hbo1510         :Q:::::GA:::::::::::::::::::V:::::::::::::::::::::::::::::::
rrnAC3041       AK:::::ET:::::::::::::::::::::::R:P:::::::::::::::::::::::::
Hmu2795         AQ:::::ES:E:S:::::::::::::::::::::P:::::::::::::::::::::::::

consensus       EVTRDPDEGATVFGPYTDKGRVETVVKALRETYGLRGCSDHKYANRDRPCLDYEMGLCSA
#oth            .1..1.233.311..1.21221..11..2.23.21....1...42.3....1.13.1.2.
NP1086A         :I::T:::A::::::::::S:::::::::::::E:::::::::EG:::::::::L:::::
HQ3694A         :::::::SD::::::::EVK:L::A::::::V:::::::::::N::N::::E::V:::::
VNG2381         :::::::P::AA::::::::D:::::::V:SV:::::::E:::RD:E:::::::::::A:
Hut0297         :I::::::::D::::F:::SQ::::C::I::::::::::::::::::::::::DI:::::
hla0568         ::::::E:::VAY::F:S::::::::::I:DE:R::::::::::::::::::::::I:::
HVO_3006        ::::::EDS:::::::::::::::::::I::::::::::::::S::S:::::::::::T:
Hbo1510         ::::::E:::::::::::::::::::::::::::V:::::::::::::::::::::::T:
rrnAC3041       ::::::AD::::Y::F:::::::::::::::A:::::::::::S::::::::::::I:T:
Hmu2795         ::::::E:::::Y::F:::::::::::::::::::::::::::EG:::::::::::::T:

consensus       PCTGEIDEADYREDVESARRFFEGETGVLADPLRREMEAAAQAAEFERAANLRDRLEAVE
#oth            ....1.4364.1111112311.3.1..2..1.1.22.23.14322.....13..1.211.
NP1086A         :::::::TDA:A::::::::::D:::::::E:::::::T::ASQA:::::S:::::::::
HQ3694A         :::::::ATA::SA::::VQ::::K::I::::::Q::Q:::T:E:::::::I::::AVI:
VNG2381         ::::A:S:RE:::A::::T::::::::A:::::::::A:::::EA:::::::::::AV::
Hut0297         ::::::NP:T:::::AAI::::R:::::::E:I:A:::R::DS:A:::::::::::AV::
hla0568         :::::::PES:A:::AA::::::::::::::::::R:::::EN:::::::::::::::::
HVO_3006        ::::::A:R:::::::::V:::::::::::::::::::::::D:::::::::::::::::
Hbo1510         ::::::A:S::::::::IV::::::::::::::::T::E::::EN::::::A::K:::::
rrnAC3041       ::::::G::::A::A:AVT:Y:::::::::::::::::::::NQ::::::::::K:G:::
Hmu2795         ::::::SAV::A:::::VE:::G::::::::::::::A::SE:Q:::::::C::K:::::

consensus       SFHGGGEEAVSSQSDE--------RAVDVLGVAIEGDAATVARLHSERGQLVDRDRHRLD
#oth            31.23134..44643411111122233...11231.23.2....1133.2.11.31.412
NP1086A         T::E::S::::GRGG-:::::::::RL::::::V::ES::::::R::D:K::E:::::V:
HQ3694A         :::::::A::::EDNSHTAETTSE::::::::::::TT::::::::DN::::::SQ:::N
VNG2381         G::E::GA::AAGDAD::::::AGAST::::::V:::::::::::A:G::::E::Q:::E
Hut0297         :::T::GG::E:TQ:-:::::::::TT:::A::L::::::::::::TG:S::::E::AVE
hla0568         A:::E:G::::DH::D:::::::::T::::AA:V:::T:R::::::::::::::S:::::
HVO_3006        ::::A::D::::::::::::::::::I:::::SLR::S:::::::A::::::::T::H::
Hbo1510         ::::A:::::T:::::::::::::::::::::::::::::::::::::::::::S:::::
rrnAC3041       AL::E:DT:::DSGGY::::::::QTT::::A::::ER:I:::::A:G:K::E::::T:E
Hmu2795         A:::DADD::QTTR:::::::::::::::::AVR::ER:::::::AAD:::I::E::G::

consensus       AP----DGED-----------RVAAVLSAFLTQYYAERELPDAILLSERPDDDDVVAWLE
#oth            1111114143111111111113434.13..23.1....21.122112.335141254..6
NP1086A         ::::::ADAE:::::::::::S:PS::A::IP:F::::S:::VL:::::Y::EELDQ::H
HQ3694A         ::::::T:::::::::::::::AS:::T::::::::::S::::::C::H:H:N::RE::S
VNG2381         ::::::Q::::::::::::::::::::A:::V::::::D::ER:::P:PHG::E:A:::D
Hut0297         T::::::DR-::::::::::::AGD::A::VP::::::::::RL:::::LP::::RS::T
hla0568         :AAVGD:::GDEDGFADPDANTP::::::::::::::::F::::::A:::S:P::ID:::
HVO_3006        ::::::E:::::::::::::::T::::::::A:F::::D::::VV:::H:::E:::::::
Hbo1510         ::::::E:GE::::::::::::S:::::::::::::::::::::::::::::::::E::N
rrnAC3041       :::::::::G:::::::::::-T:G:YR::IP::::::::::R::CA:A:A:P:IE::::
Hmu2795         ::::::::DG:::::::::::-:GE:::::I::::::::F:E:V:C::::GE-:::E::A

consensus       AEGVDVRVPGAGREAKLVDLALKNARRRGGRDDGLAALADALGID--RPARIEGFDVSHA
#oth            311.5221..1..112.11......133446413423.122.23311434....1....2
NP1086A         :::::I:::::::A:T::E::::::::TTAEA::PT:::RR::::::::E::::::::::
HQ3694A         V:::NI::::T:::S::I::::::::NGSVH:NES::::::::FS::IIN:::::::::S
VNG2381         :AD:A:G::::::::R::E::::::H::A:GG:E:G:::::::VR::::E::::V:::::
Hut0297         SA::::V::::::::T:::::::::::KT:Q:::V::::::::L:::AAD:::::::::T
hla0568         ::::S:::::::::::::E:::::::K::::E:PVG::GER:::::::::::::::::::
HVO_3006        ::::G::I::::::::::E:::::::::A:::::::T::RE:DL:VR:V:::::::::::
Hbo1510         V:::S::::::::::::I:::::::::GPT::::::V::ER:D:P::::S::::::::::
rrnAC3041       S:::TLG::::::::T::::::::::Q:::T::ESGR::::::::::H:S::::::::::
Hmu2795         G::::::::::::::T:::::::::::G:PAR:DT:::::::AL:::SAD::::::::::

consensus       QGRAVVGSNVCFVDGSAETADYRRKKLTERNDDYANMRELVRWRAERAVEGRDDRPDPDL
#oth            1.331...1.3.111211141...12.214....12.14.22...2..3211.1..1..1
NP1086A         G:KDA:::::V:::::P:::::::RS:DDE::::::::R::::::T::::::::::T:::
HQ3694A         ::::::::::::I::::A:DA::::R::DT:::::R:Q::LT:::K::CD:::E::::::
VNG2381         :::E:::::::::::::::::::::::D:E::::::::R::G:::::::D:::::::::V
Hut0297         G:GS::::D::::::TPAKP:::::::P:G:::::A::S:IG:::::::A::::::::::
hla0568         ::T:::::D::::::::::S::::::::D::::::::::::::::::::A:E::::::::
HVO_3006        ::K:::::D::::E::::::::::RR:P::::::::::D::::::T::L:::::::::::
Hbo1510         ::K:::::D:::::::::K::::::::P::::::E:::A:I:::::::::::::::::::
rrnAC3041       :::SA:::::T:::ETP:KS:::::::::Q::::::::::L::::T::::::::::::::
Hmu2795         ::::::::::A::::D:AKR:::::::::::::::::::::::::K::I:D:::::::::

consensus       LLIDGGDGQLGAARDALAETGWDVP--AIALAKDEELVVTPDGVYDWDDDAPQLHLLQRV
#oth            111...4...4..21.1332...21112111..12.2.1.131142.42.2.4.211..1
NP1086A         :::::::::::::Q:::::::::::::::::::AD:::::S:::A::-::G:A:R:::::
HQ3694A         IV::::K:::R:::E:VET:::::S::T:::::AD::::::N::H:::A:::::::::::
VNG2381         ::V:::R:::D::L::VEAA:::G:DAV::::::::V:::::RT:::GS::::::V::::
Hut0297         ::::::E:::A:::E::DAV:::I::::VG:::A::R:I::ER::K::::::::Q:::::
hla0568         ::::::G::::::::::::::::::::VV::::A:::::::T:TRR:P::::E:::::::
HVO_3006        ::::::K:::N::L:::D::::::::::VGI:::R:::::::RTF::P::::H::V::::
Hbo1510         :::::::::::::::::T:V::::::::::::::::::I::::::::PS:::H::V::::
rrnAC3041       ::::::::::::::::::::::::::::::::::::::I:::R::::N:::::::::::I
Hmu2795         ::::::::::::::::::D:::::::::V::::::::::::T:TH:::::D:K:::C:::

consensus       RDEAHRFAVQYHQTLRDDVSTVLDDVPGVGPETRRRLLRRFGSVDGVRAASREDLTDVPG
#oth            .........2..222..214.3.1311.1.121151..3...1.22..4.1442.4213.
NP1086A         :::::::::::::QV::A:::P::S:::::::L:E:::K:::T:::::S::::E:ER:D:
HQ3694A         :::::::::::::SI:::IH:::S::::::EQ:QQA::::::::EN::S:::DA:C::::
VNG2381         :::::::::A::R::::::T:A::GIT:::::L:A:::G:::::A:::Q::VK::R::A:
Hut0297         ::::::::::::E::::::::A::::::::::L:T:::G:::::::::E::LSE:R::::
hla0568         :::::::::S::::V::E:K:::::::::::Q::::::::::::ES::D::LD:::::D:
HVO_3006        :::::::::::::::::E:K::::::::::EK:::A::T:::::E:::E::V::::::::
Hbo1510         :::::::::::::::::::R::::::::::EK:::A::::::::EN::::TTA:::::::
rrnAC3041       :::::::::::::::::E:::T::::::I:::::K::::::::::S:::::D:E::AID:
Hmu2795         ::::::::::::::V::E:T:A::E:::::::::K::::::::::N:::::T:E:LA:E:

consensus       VGEATADTIRRRL----
#oth            1.34..421372.2111
NP1086A         :::D::AA:DAA:::::
HQ3694A         ::KQ:::::AN::::::
VNG2381         ::::::E::AK::::::
Hut0297         ::::::K::::Q:::::
hla0568         ::D:::::L:E::::::
HVO_3006        :::K:::ELK:::::::
Hbo1510         :::K::TELKQ::SGGE
rrnAC3041       I::Q::E:::T::Q:::
Hmu2795         ::AG::E:::S::S:::