|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4392 | NP1086A | HQ3694A | VNG2381 | Hut0297 | hla0568 | HVO_3006 | Hbo1510 | rrnAC3041 | Hmu2795 |
3328 | NP1086A | 4315 | 2740 | 2853 | 2950 | 2992 | 3032 | 3064 | 3040 | 2960 |
3331 | HQ3694A | 2740 | 4417 | 2878 | 2845 | 2927 | 3027 | 3136 | 2877 | 2930 |
3340 | VNG2381 | 2853 | 2878 | 4451 | 2996 | 2951 | 3110 | 3057 | 3030 | 2836 |
3383 | Hut0297 | 2950 | 2845 | 2996 | 4403 | 3013 | 3025 | 3144 | 3061 | 2991 |
3646 | hla0568 | 2992 | 2927 | 2951 | 3013 | 4498 | 3308 | 3371 | 3266 | 3194 |
3705 | HVO_3006 | 3032 | 3027 | 3110 | 3025 | 3308 | 4385 | 3671 | 3181 | 3140 |
3824 | Hbo1510 | 3064 | 3136 | 3057 | 3144 | 3371 | 3671 | 4413 | 3241 | 3276 |
3557 | rrnAC3041 | 3040 | 2877 | 3030 | 3061 | 3266 | 3181 | 3241 | 4431 | 3386 |
3507 | Hmu2795 | 2960 | 2930 | 2836 | 2991 | 3194 | 3140 | 3276 | 3386 | 4375 |
617 symbols consensus MDADEVRERAADLPAEPGVYQFL----AGRT----VLYVGKAVDLRDRVRSYADPRSERI #oth .24431131.44..31....2.311113245233211.....121.3.....21..13.. NP1086A :::SA::K:::E::::::::::E::::::ES:::::::::::::::E:::::VA:::D:: HQ3694A :KQR:L:::::E:::::::::::::::EDN::::::R:::::LE:::::::::::::::: VNG2381 :NG::::A::SE::::::::::VARDPD:TADGER:::::::::I:::::::G::::::: Hut0297 ::SA:::T::G:::T::::::::::::DSTRGDAT:::::::::::::::::::::G::: hla0568 ::::A:::::::::T:::::::R::::::E:::::T:::::::N::N::::::::::G:: HVO_3006 ::PAA:S:::SA::SD::::::V::::::DA:::::::::::::I:A::::::::::::: Hbo1510 :::SD:::::T:::TD:::::::::::D:D::::::::::::::I:A:::::::::G::: rrnAC3041 ::::::::::GS::R:::::L:E::::Q::DDKRR::::::::::::::::::::::::: Hmu2795 :::TG:::A:DV::R:::::H:V:::::D:-::::::::::::::::::::::::::A:: consensus RRMVERADDIDFAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPLVQLTDH-PVPRI #oth 23..31.3512221.1...........11..21.1.....1........13.3.132... NP1086A :::::A:AAV::::::::::::::::::::::::::::::::::::::::::A::EA::: HQ3694A :Q::A::::::I:L:E::::::::::::::::::::::::::::::::::F:N::S:::: VNG2381 AG::A::::VTV::::::::::::::::V:::::::::::::::::::::V:S:REA::: Hut0297 :::::::A:::VV::::::::::::::F:::Y::::::::R:::::::::::::::T::: hla0568 :G::G:::R:E::::::::::::::::::::LR::::::::::::::::AI::::::::: HVO_3006 S:::D::EH:::::::::::::::::::::::::::::::::::::::::::A::A:::: Hbo1510 :Q:::::GA:::::::::::::::::::V::::::::::::::::::::::::::::::: rrnAC3041 AK:::::ET:::::::::::::::::::::::R:P::::::::::::::::::::::::: Hmu2795 AQ:::::ES:E:S:::::::::::::::::::::P::::::::::::::::::::::::: consensus EVTRDPDEGATVFGPYTDKGRVETVVKALRETYGLRGCSDHKYANRDRPCLDYEMGLCSA #oth .1..1.233.311..1.21221..11..2.23.21....1...42.3....1.13.1.2. NP1086A :I::T:::A::::::::::S:::::::::::::E:::::::::EG:::::::::L::::: HQ3694A :::::::SD::::::::EVK:L::A::::::V:::::::::::N::N::::E::V::::: VNG2381 :::::::P::AA::::::::D:::::::V:SV:::::::E:::RD:E:::::::::::A: Hut0297 :I::::::::D::::F:::SQ::::C::I::::::::::::::::::::::::DI::::: hla0568 ::::::E:::VAY::F:S::::::::::I:DE:R::::::::::::::::::::::I::: HVO_3006 ::::::EDS:::::::::::::::::::I::::::::::::::S::S:::::::::::T: Hbo1510 ::::::E:::::::::::::::::::::::::::V:::::::::::::::::::::::T: rrnAC3041 ::::::AD::::Y::F:::::::::::::::A:::::::::::S::::::::::::I:T: Hmu2795 ::::::E:::::Y::F:::::::::::::::::::::::::::EG:::::::::::::T: consensus PCTGEIDEADYREDVESARRFFEGETGVLADPLRREMEAAAQAAEFERAANLRDRLEAVE #oth ....1.4364.1111112311.3.1..2..1.1.22.23.14322.....13..1.211. NP1086A :::::::TDA:A::::::::::D:::::::E:::::::T::ASQA:::::S::::::::: HQ3694A :::::::ATA::SA::::VQ::::K::I::::::Q::Q:::T:E:::::::I::::AVI: VNG2381 ::::A:S:RE:::A::::T::::::::A:::::::::A:::::EA:::::::::::AV:: Hut0297 ::::::NP:T:::::AAI::::R:::::::E:I:A:::R::DS:A:::::::::::AV:: hla0568 :::::::PES:A:::AA::::::::::::::::::R:::::EN::::::::::::::::: HVO_3006 ::::::A:R:::::::::V:::::::::::::::::::::::D::::::::::::::::: Hbo1510 ::::::A:S::::::::IV::::::::::::::::T::E::::EN::::::A::K::::: rrnAC3041 ::::::G::::A::A:AVT:Y:::::::::::::::::::::NQ::::::::::K:G::: Hmu2795 ::::::SAV::A:::::VE:::G::::::::::::::A::SE:Q:::::::C::K::::: consensus SFHGGGEEAVSSQSDE--------RAVDVLGVAIEGDAATVARLHSERGQLVDRDRHRLD #oth 31.23134..44643411111122233...11231.23.2....1133.2.11.31.412 NP1086A T::E::S::::GRGG-:::::::::RL::::::V::ES::::::R::D:K::E:::::V: HQ3694A :::::::A::::EDNSHTAETTSE::::::::::::TT::::::::DN::::::SQ:::N VNG2381 G::E::GA::AAGDAD::::::AGAST::::::V:::::::::::A:G::::E::Q:::E Hut0297 :::T::GG::E:TQ:-:::::::::TT:::A::L::::::::::::TG:S::::E::AVE hla0568 A:::E:G::::DH::D:::::::::T::::AA:V:::T:R::::::::::::::S::::: HVO_3006 ::::A::D::::::::::::::::::I:::::SLR::S:::::::A::::::::T::H:: Hbo1510 ::::A:::::T:::::::::::::::::::::::::::::::::::::::::::S::::: rrnAC3041 AL::E:DT:::DSGGY::::::::QTT::::A::::ER:I:::::A:G:K::E::::T:E Hmu2795 A:::DADD::QTTR:::::::::::::::::AVR::ER:::::::AAD:::I::E::G:: consensus AP----DGED-----------RVAAVLSAFLTQYYAERELPDAILLSERPDDDDVVAWLE #oth 1111114143111111111113434.13..23.1....21.122112.335141254..6 NP1086A ::::::ADAE:::::::::::S:PS::A::IP:F::::S:::VL:::::Y::EELDQ::H HQ3694A ::::::T:::::::::::::::AS:::T::::::::::S::::::C::H:H:N::RE::S VNG2381 ::::::Q::::::::::::::::::::A:::V::::::D::ER:::P:PHG::E:A:::D Hut0297 T::::::DR-::::::::::::AGD::A::VP::::::::::RL:::::LP::::RS::T hla0568 :AAVGD:::GDEDGFADPDANTP::::::::::::::::F::::::A:::S:P::ID::: HVO_3006 ::::::E:::::::::::::::T::::::::A:F::::D::::VV:::H:::E::::::: Hbo1510 ::::::E:GE::::::::::::S:::::::::::::::::::::::::::::::::E::N rrnAC3041 :::::::::G:::::::::::-T:G:YR::IP::::::::::R::CA:A:A:P:IE:::: Hmu2795 ::::::::DG:::::::::::-:GE:::::I::::::::F:E:V:C::::GE-:::E::A consensus AEGVDVRVPGAGREAKLVDLALKNARRRGGRDDGLAALADALGID--RPARIEGFDVSHA #oth 311.5221..1..112.11......133446413423.122.23311434....1....2 NP1086A :::::I:::::::A:T::E::::::::TTAEA::PT:::RR::::::::E:::::::::: HQ3694A V:::NI::::T:::S::I::::::::NGSVH:NES::::::::FS::IIN:::::::::S VNG2381 :AD:A:G::::::::R::E::::::H::A:GG:E:G:::::::VR::::E::::V::::: Hut0297 SA::::V::::::::T:::::::::::KT:Q:::V::::::::L:::AAD:::::::::T hla0568 ::::S:::::::::::::E:::::::K::::E:PVG::GER::::::::::::::::::: HVO_3006 ::::G::I::::::::::E:::::::::A:::::::T::RE:DL:VR:V::::::::::: Hbo1510 V:::S::::::::::::I:::::::::GPT::::::V::ER:D:P::::S:::::::::: rrnAC3041 S:::TLG::::::::T::::::::::Q:::T::ESGR::::::::::H:S:::::::::: Hmu2795 G::::::::::::::T:::::::::::G:PAR:DT:::::::AL:::SAD:::::::::: consensus QGRAVVGSNVCFVDGSAETADYRRKKLTERNDDYANMRELVRWRAERAVEGRDDRPDPDL #oth 1.331...1.3.111211141...12.214....12.14.22...2..3211.1..1..1 NP1086A G:KDA:::::V:::::P:::::::RS:DDE::::::::R::::::T::::::::::T::: HQ3694A ::::::::::::I::::A:DA::::R::DT:::::R:Q::LT:::K::CD:::E:::::: VNG2381 :::E:::::::::::::::::::::::D:E::::::::R::G:::::::D:::::::::V Hut0297 G:GS::::D::::::TPAKP:::::::P:G:::::A::S:IG:::::::A:::::::::: hla0568 ::T:::::D::::::::::S::::::::D::::::::::::::::::::A:E:::::::: HVO_3006 ::K:::::D::::E::::::::::RR:P::::::::::D::::::T::L::::::::::: Hbo1510 ::K:::::D:::::::::K::::::::P::::::E:::A:I::::::::::::::::::: rrnAC3041 :::SA:::::T:::ETP:KS:::::::::Q::::::::::L::::T:::::::::::::: Hmu2795 ::::::::::A::::D:AKR:::::::::::::::::::::::::K::I:D::::::::: consensus LLIDGGDGQLGAARDALAETGWDVP--AIALAKDEELVVTPDGVYDWDDDAPQLHLLQRV #oth 111...4...4..21.1332...21112111..12.2.1.131142.42.2.4.211..1 NP1086A :::::::::::::Q:::::::::::::::::::AD:::::S:::A::-::G:A:R::::: HQ3694A IV::::K:::R:::E:VET:::::S::T:::::AD::::::N::H:::A::::::::::: VNG2381 ::V:::R:::D::L::VEAA:::G:DAV::::::::V:::::RT:::GS::::::V:::: Hut0297 ::::::E:::A:::E::DAV:::I::::VG:::A::R:I::ER::K::::::::Q::::: hla0568 ::::::G::::::::::::::::::::VV::::A:::::::T:TRR:P::::E::::::: HVO_3006 ::::::K:::N::L:::D::::::::::VGI:::R:::::::RTF::P::::H::V:::: Hbo1510 :::::::::::::::::T:V::::::::::::::::::I::::::::PS:::H::V:::: rrnAC3041 ::::::::::::::::::::::::::::::::::::::I:::R::::N:::::::::::I Hmu2795 ::::::::::::::::::D:::::::::V::::::::::::T:TH:::::D:K:::C::: consensus RDEAHRFAVQYHQTLRDDVSTVLDDVPGVGPETRRRLLRRFGSVDGVRAASREDLTDVPG #oth .........2..222..214.3.1311.1.121151..3...1.22..4.1442.4213. NP1086A :::::::::::::QV::A:::P::S:::::::L:E:::K:::T:::::S::::E:ER:D: HQ3694A :::::::::::::SI:::IH:::S::::::EQ:QQA::::::::EN::S:::DA:C:::: VNG2381 :::::::::A::R::::::T:A::GIT:::::L:A:::G:::::A:::Q::VK::R::A: Hut0297 ::::::::::::E::::::::A::::::::::L:T:::G:::::::::E::LSE:R:::: hla0568 :::::::::S::::V::E:K:::::::::::Q::::::::::::ES::D::LD:::::D: HVO_3006 :::::::::::::::::E:K::::::::::EK:::A::T:::::E:::E::V:::::::: Hbo1510 :::::::::::::::::::R::::::::::EK:::A::::::::EN::::TTA::::::: rrnAC3041 :::::::::::::::::E:::T::::::I:::::K::::::::::S:::::D:E::AID: Hmu2795 ::::::::::::::V::E:T:A::E:::::::::K::::::::::N:::::T:E:LA:E: consensus VGEATADTIRRRL---- #oth 1.34..421372.2111 NP1086A :::D::AA:DAA::::: HQ3694A ::KQ:::::AN:::::: VNG2381 ::::::E::AK:::::: Hut0297 ::::::K::::Q::::: hla0568 ::D:::::L:E:::::: HVO_3006 :::K:::ELK::::::: Hbo1510 :::K::TELKQ::SGGE rrnAC3041 I::Q::E:::T::Q::: Hmu2795 ::AG::E:::S::S:::