Home |  Text search
[U] (SecF) COG0341 Preprotein translocase subunit SecF
9 genomes BUD0190 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1988

rrnAC3214

HVO_1975

Hbo1844

Hmu2552

Hut0345

hla1288

NP2524A

HQ3098A

Pairwise sequence scores
Consensus score2051 NP2524A hla1288 Hut0345 VNG1988 rrnAC3214 Hmu2552 HQ3098A HVO_1975 Hbo1844
1427NP2524A 2296 1219 1199 1125 1207 1191 1236 1288 1265
1482hla1288 1219 2119 1233 1235 1253 1231 1293 1409 1385
1514Hut0345 1199 1233 2066 1174 1346 1323 1286 1346 1368
1425VNG1988 1125 1235 1174 2060 1298 1272 1258 1384 1366
1560rrnAC3214 1207 1253 1346 1298 2267 1467 1290 1374 1383
1507Hmu2552 1191 1231 1323 1272 1467 2170 1311 1396 1450
1637HQ3098A 1236 1293 1286 1258 1290 1311 2081 1509 1578
1740HVO_1975 1288 1409 1346 1384 1374 1396 1509 2068 1749
1740Hbo1844 1265 1385 1368 1366 1383 1450 1578 1749 2136

342 symbols
consensus       ---------------------------MVEFEVPEVDYTRYSNRQLVAVPLAVLALALAV
#oth            12222222222222222222122211116322..2.1124.111..122..21.22.121
NP2524A         MRTARLKRVDPFDTRTTTLIHGGFTSERMDLS::K:::SD:T:::::TI::::::F:::I
hla1288         :::::::::::::::::::::::::::::AI:::::N::E::::::::I:::::V::::I
Hut0345         ::::::::::::::::::::::::::::I::::::::::K::::::A:::::::::::V:
VNG1988         ::::::::::::::::::::::::::::SW::::D::LSQ::M:::::P:::::VV::::
rrnAC3214       MYGTADVSGSDWEGLFRPVSHRSV::::F::::::::::Q:::::::::::V::G:::::
Hmu2552         ::::::::::::::::::::::::::::NA::::::::DQ:T::::A::::::::::ILI
HQ3098A         ::::::::::::::::::::::::::::A::T:::::::::::Y:::VI::II::V::LI
HVO_1975        :::::::::::::::::::::::::::::::T:::::::::T::::A::::::::V::L:
Hbo1844         :::::::::::::::::::::::::::::::T:::::::::T::::A::::::::V::L:

consensus       IGGWYV-------ATGAPVNPGIDFTGGSELTVETD---ASQAQIEAA-FDAEPESVQSV
#oth            232142111111121.1.132132....313323321224363227331.36214.2233
NP2524A         LAVAT::::::::V::S::AL:M:::::A::Q:::T:::D:::E:::Q:::EPV::ITQ:
hla1288         :::::L:::::::V::::A:L:LE::::V::RIAD::GGDVEQ:::T:::ERQ:D::R:I
Hut0345         LI:AWA:::::::V::S::AL::::::::QM::Q:::::L:A:D:QTN::TP::::::GL
VNG1988         ::::MA:::::::::::::S:::E::::::VVAQSS::::PS::VK::::::::T:FR::
rrnAC3214       L::::L:::::::V:::::S:S::::::::::::SS:::L:::ELRDNT::EPVV:::Q:
Hmu2552         LV::SLFVSGSVA:P::::T:::::::::::::V:S:::M:K:E:GDE:::T::I:::QA
HQ3098A         :AS::::::::::L::S::TQ::A::::T:I:::::::G:TTT::VE:::SV::::::A:
HVO_1975        ::::::::::::::::::::::V:::::T::RIA::::::P:SEVA:::::SQ:::IR::
Hbo1844         VA::::::::::::::::::Q::E::::T:IQ:VV:DASNPH:::ND:::T:::::I:::

consensus       ----------PAENT-YIVTFQS------GANLTDLEAQAESAG-MEVRSSGEVSASFGA
#oth            2211111111444253.332.312133434646452772145111434533442113.13
NP2524A         GS:::::::::TS:::::IE:::::::GDYDD:G::V::::A:::Y:IQQE::R::::A:
hla1288         ::::::::::::DDV::V:::RAADEDPG:L-AD::S:::DE:::LSTSAIDQ::P::AS
Hut0345         ::::::::::VL:DNA:RL::G::::::::::I:E:KG::T:S:::N:T:::STP:::::
VNG1988         ::::::::::GTNGNR:LA::::::::::---ENAPGISGDT:D:I:IVQ:Q:::PT::S
rrnAC3214       ::::::::::EG::R:::I::D:::::::-S::EPI:ET:R:SDQ::FLG::TT:PI::Q
Hmu2552         AENAEAETVG:N::Q::::R:::::::::-FDTES:RD::Q::D::QLL::SST::T::G
HQ3098A         :::::::::::TA::::::::::::NGNS:VAV:::TR:::Q:::F::Q:AY:::P::::
HVO_1975        ::::::::::A:DG:::V::::::::::GS:TS:E:QT:::D:::F::::IDA:::N::G
Hbo1844         :::::::::::::GSL:::::::EDGSSGAV:SNT::Q:::::::F::::ISS:::N::S

consensus       DTQRLALGGVAIAFLGMSVLVFAMFRSFVPSIAVVVSAFSDIVIPLALMNLLGIELSLGT
#oth            32253.13.223..1..1311111..21...1.113.....12112.2122131211...
NP2524A         :S:QQ::F:I::::A::AL::A::::T:::::::IA::::::M::::::R:FD:::T:::
hla1288         ::A:T:VF:::L:::::::::::L::T::::L:::A:::::LMV:I:V::::::QMT:::
Hut0345         :SM:V::F:I::::::::::A::L::T::::::I:I:::::L:::::VLS:FQVK:::::
VNG1988         S::G:::L:::A:::::::::::L::T::::::::::::::::V:V::::VFE:K:::::
rrnAC3214       EN::::VV:IGV::::::L::::::::V:::::::L:::::L:::::V::::::K:::::
Hmu2552         :N:TT:VV::L:::A:::AI:::L:::::::::::::::::::::::A::V:::::::::
HQ3098A         T::T::::::GV::::::::::L:::V:::::::::::::::A:SV::::V:::::::::
HVO_1975        E::L:::::L:V::A::::::::::::::::::::L:::::::::V:::::F::::::::
Hbo1844         :::W:::::::A::::::I::::::::::::::::I:::::::::V::::I:::::::::

consensus       VAALLMLIGYSVDSDILLNNHVLRRSGDFYESTYRAMRTGVTMTLTSIAAMIVMAIVATL
#oth            1.1...1........1....11...3.3.11.151..3......1..23..4..123133
NP2524A         :::::::::::::::L:::::::::H::::T::F::::::::::V:::::::::TV::S:
hla1288         I:::::I:::::::::::::S::::T::::::VN:::::::::::::M:::::::V::A:
Hut0345         ::G::::::::::::::::::I:::R:E::::::A::Q::::::::::V::T::::M:::
VNG1988         :::::::::::::::::::::::::::G:W::VD:::N:::::::::::::V::T::SYI
rrnAC3214       :::::::::::::::::::::::::::G:::::::::::::::::::M:::A::::S::I
Hmu2552         :::::::::::::::::::::I:::::S::::VH:::E:::::::::LS::A:::V::SF
HQ3098A         ::::::I:::::::::::::::::::::::::::::::::::::::::I::S:::A:::A
HVO_1975        :::::::::::::::::::::::::::::::::A::::::::::::::::::::T:M:::
Hbo1844         :::::::::::::::::::::I::::::::::::::::::::::::::::::::T:T::I

consensus       FGIQLLAAIGTVLVFGLAADLMNTYMLNVSLLRWYKFEGVAR
#oth            111411341.31.14..62......1..11...1..12.142
NP2524A         L::P::PDV:LI:::::L:::::::L:::::::Y::Y::I:K
hla1288         ::VD::RN::II:SV::C:::::::L::::::::::::::KQ
Hut0345         ::::IM:Q::I:::L::SV:::::::::L::::::::H::N:
VNG1988         :::T:MSS::L:::M::VT::::::::::T:::::::::::K
rrnAC3214       :::E:M:S::F:::V::::::::::::::T::::::Y:::K:
Hmu2552         :N:::M:S::::::I:::::::::::::L:::::::::::N:
HQ3098A         :::::::::::::::::I:::::::L::L::::::::K::::
HVO_1975        :::::::::::::::::T:::::::::::T::::::::::T:
Hbo1844         ::::::::::::::::::::::::::::L:::::::::::S: