|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2051 | NP2524A | hla1288 | Hut0345 | VNG1988 | rrnAC3214 | Hmu2552 | HQ3098A | HVO_1975 | Hbo1844 |
1427 | NP2524A | 2296 | 1219 | 1199 | 1125 | 1207 | 1191 | 1236 | 1288 | 1265 |
1482 | hla1288 | 1219 | 2119 | 1233 | 1235 | 1253 | 1231 | 1293 | 1409 | 1385 |
1514 | Hut0345 | 1199 | 1233 | 2066 | 1174 | 1346 | 1323 | 1286 | 1346 | 1368 |
1425 | VNG1988 | 1125 | 1235 | 1174 | 2060 | 1298 | 1272 | 1258 | 1384 | 1366 |
1560 | rrnAC3214 | 1207 | 1253 | 1346 | 1298 | 2267 | 1467 | 1290 | 1374 | 1383 |
1507 | Hmu2552 | 1191 | 1231 | 1323 | 1272 | 1467 | 2170 | 1311 | 1396 | 1450 |
1637 | HQ3098A | 1236 | 1293 | 1286 | 1258 | 1290 | 1311 | 2081 | 1509 | 1578 |
1740 | HVO_1975 | 1288 | 1409 | 1346 | 1384 | 1374 | 1396 | 1509 | 2068 | 1749 |
1740 | Hbo1844 | 1265 | 1385 | 1368 | 1366 | 1383 | 1450 | 1578 | 1749 | 2136 |
342 symbols consensus ---------------------------MVEFEVPEVDYTRYSNRQLVAVPLAVLALALAV #oth 12222222222222222222122211116322..2.1124.111..122..21.22.121 NP2524A MRTARLKRVDPFDTRTTTLIHGGFTSERMDLS::K:::SD:T:::::TI::::::F:::I hla1288 :::::::::::::::::::::::::::::AI:::::N::E::::::::I:::::V::::I Hut0345 ::::::::::::::::::::::::::::I::::::::::K::::::A:::::::::::V: VNG1988 ::::::::::::::::::::::::::::SW::::D::LSQ::M:::::P:::::VV:::: rrnAC3214 MYGTADVSGSDWEGLFRPVSHRSV::::F::::::::::Q:::::::::::V::G::::: Hmu2552 ::::::::::::::::::::::::::::NA::::::::DQ:T::::A::::::::::ILI HQ3098A ::::::::::::::::::::::::::::A::T:::::::::::Y:::VI::II::V::LI HVO_1975 :::::::::::::::::::::::::::::::T:::::::::T::::A::::::::V::L: Hbo1844 :::::::::::::::::::::::::::::::T:::::::::T::::A::::::::V::L: consensus IGGWYV-------ATGAPVNPGIDFTGGSELTVETD---ASQAQIEAA-FDAEPESVQSV #oth 232142111111121.1.132132....313323321224363227331.36214.2233 NP2524A LAVAT::::::::V::S::AL:M:::::A::Q:::T:::D:::E:::Q:::EPV::ITQ: hla1288 :::::L:::::::V::::A:L:LE::::V::RIAD::GGDVEQ:::T:::ERQ:D::R:I Hut0345 LI:AWA:::::::V::S::AL::::::::QM::Q:::::L:A:D:QTN::TP::::::GL VNG1988 ::::MA:::::::::::::S:::E::::::VVAQSS::::PS::VK::::::::T:FR:: rrnAC3214 L::::L:::::::V:::::S:S::::::::::::SS:::L:::ELRDNT::EPVV:::Q: Hmu2552 LV::SLFVSGSVA:P::::T:::::::::::::V:S:::M:K:E:GDE:::T::I:::QA HQ3098A :AS::::::::::L::S::TQ::A::::T:I:::::::G:TTT::VE:::SV::::::A: HVO_1975 ::::::::::::::::::::::V:::::T::RIA::::::P:SEVA:::::SQ:::IR:: Hbo1844 VA::::::::::::::::::Q::E::::T:IQ:VV:DASNPH:::ND:::T:::::I::: consensus ----------PAENT-YIVTFQS------GANLTDLEAQAESAG-MEVRSSGEVSASFGA #oth 2211111111444253.332.312133434646452772145111434533442113.13 NP2524A GS:::::::::TS:::::IE:::::::GDYDD:G::V::::A:::Y:IQQE::R::::A: hla1288 ::::::::::::DDV::V:::RAADEDPG:L-AD::S:::DE:::LSTSAIDQ::P::AS Hut0345 ::::::::::VL:DNA:RL::G::::::::::I:E:KG::T:S:::N:T:::STP::::: VNG1988 ::::::::::GTNGNR:LA::::::::::---ENAPGISGDT:D:I:IVQ:Q:::PT::S rrnAC3214 ::::::::::EG::R:::I::D:::::::-S::EPI:ET:R:SDQ::FLG::TT:PI::Q Hmu2552 AENAEAETVG:N::Q::::R:::::::::-FDTES:RD::Q::D::QLL::SST::T::G HQ3098A :::::::::::TA::::::::::::NGNS:VAV:::TR:::Q:::F::Q:AY:::P:::: HVO_1975 ::::::::::A:DG:::V::::::::::GS:TS:E:QT:::D:::F::::IDA:::N::G Hbo1844 :::::::::::::GSL:::::::EDGSSGAV:SNT::Q:::::::F::::ISS:::N::S consensus DTQRLALGGVAIAFLGMSVLVFAMFRSFVPSIAVVVSAFSDIVIPLALMNLLGIELSLGT #oth 32253.13.223..1..1311111..21...1.113.....12112.2122131211... NP2524A :S:QQ::F:I::::A::AL::A::::T:::::::IA::::::M::::::R:FD:::T::: hla1288 ::A:T:VF:::L:::::::::::L::T::::L:::A:::::LMV:I:V::::::QMT::: Hut0345 :SM:V::F:I::::::::::A::L::T::::::I:I:::::L:::::VLS:FQVK::::: VNG1988 S::G:::L:::A:::::::::::L::T::::::::::::::::V:V::::VFE:K::::: rrnAC3214 EN::::VV:IGV::::::L::::::::V:::::::L:::::L:::::V::::::K::::: Hmu2552 :N:TT:VV::L:::A:::AI:::L:::::::::::::::::::::::A::V::::::::: HQ3098A T::T::::::GV::::::::::L:::V:::::::::::::::A:SV::::V::::::::: HVO_1975 E::L:::::L:V::A::::::::::::::::::::L:::::::::V:::::F:::::::: Hbo1844 :::W:::::::A::::::I::::::::::::::::I:::::::::V::::I::::::::: consensus VAALLMLIGYSVDSDILLNNHVLRRSGDFYESTYRAMRTGVTMTLTSIAAMIVMAIVATL #oth 1.1...1........1....11...3.3.11.151..3......1..23..4..123133 NP2524A :::::::::::::::L:::::::::H::::T::F::::::::::V:::::::::TV::S: hla1288 I:::::I:::::::::::::S::::T::::::VN:::::::::::::M:::::::V::A: Hut0345 ::G::::::::::::::::::I:::R:E::::::A::Q::::::::::V::T::::M::: VNG1988 :::::::::::::::::::::::::::G:W::VD:::N:::::::::::::V::T::SYI rrnAC3214 :::::::::::::::::::::::::::G:::::::::::::::::::M:::A::::S::I Hmu2552 :::::::::::::::::::::I:::::S::::VH:::E:::::::::LS::A:::V::SF HQ3098A ::::::I:::::::::::::::::::::::::::::::::::::::::I::S:::A:::A HVO_1975 :::::::::::::::::::::::::::::::::A::::::::::::::::::::T:M::: Hbo1844 :::::::::::::::::::::I::::::::::::::::::::::::::::::::T:T::I consensus FGIQLLAAIGTVLVFGLAADLMNTYMLNVSLLRWYKFEGVAR #oth 111411341.31.14..62......1..11...1..12.142 NP2524A L::P::PDV:LI:::::L:::::::L:::::::Y::Y::I:K hla1288 ::VD::RN::II:SV::C:::::::L::::::::::::::KQ Hut0345 ::::IM:Q::I:::L::SV:::::::::L::::::::H::N: VNG1988 :::T:MSS::L:::M::VT::::::::::T:::::::::::K rrnAC3214 :::E:M:S::F:::V::::::::::::::T::::::Y:::K: Hmu2552 :N:::M:S::::::I:::::::::::::L:::::::::::N: HQ3098A :::::::::::::::::I:::::::L::L::::::::K:::: HVO_1975 :::::::::::::::::T:::::::::::T::::::::::T: Hbo1844 ::::::::::::::::::::::::::::L:::::::::::S: