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[U] (SecD) COG0342 Preprotein translocase subunit SecD
9 genomes BUD0197 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1987

rrnAC3215

HVO_1976

Hbo1845

Hmu2551

Hut0346

hla1287

NP2522A

HQ3097A

Pairwise sequence scores
Consensus score3788 VNG1987 NP2522A hla1287 HQ3097A Hbo1845 HVO_1976 Hmu2551 rrnAC3215 Hut0346
2151VNG1987 3706 1785 1692 1699 1680 1648 1637 1666 1624
2246NP2522A 1785 4209 1844 1765 1807 1816 1817 1842 1798
2524hla1287 1692 1844 3876 2103 2145 2198 1716 1777 1778
2598HQ3097A 1699 1765 2103 3766 2554 2521 1795 1783 1752
2676Hbo1845 1680 1807 2145 2554 3788 2582 1848 1794 1865
2728HVO_1976 1648 1816 2198 2521 2582 3819 1824 1857 1830
2380Hmu2551 1637 1817 1716 1795 1848 1824 3967 2138 2080
2367rrnAC3215 1666 1842 1777 1783 1794 1857 2138 3780 2245
2295Hut0346 1624 1798 1778 1752 1865 1830 2080 2245 3754

610 symbols
consensus       -MSTLRENWRIILLVVLVLGSTVALFAP----------------------------GLGP
#oth            13572131.1142..333241421.24.11111111111111111111111111114746
VNG1987         :::WF::::::AA:::::VA:S:::::::::::::::::::::::::::::::::::I:A
NP2522A         MNLQ:KKH:::W::::F::I::::::G:LGDDAADEPTGDAAPEIEGEQQGDEMEAAQPD
hla1287         MLEPIKN::Q:L::::V:::A:::::::::::::::::::::::::::::::::::QF::
HQ3097A         ::IDF::::::::::IV:IV:LF::VS:::::::::::::::::::::::::::::T:AS
Hbo1845         ::GR::D:::VL::::FL:V::F:::S:::::::::::::::::::::::::::::T:AS
HVO_1976        ::::::D:::V:F::AAI:L::F:::S:::::::::::::::::::::::::::::TM:N
Hmu2551         :::G::D::::::::::A:::::T:LV::::::::::::::::::::::::::::::ATV
rrnAC3215       :::::K::::VVA::T:L:L:A::::I::::::::::::::::::::::::::::::VP:
Hut0346         :-MNI::::::V::::F::::GI:::::::::::::::::::::::::::::::::----

consensus       GTAD--------NGGNAAAGGITNLQYGLQLSGGTRIRAPLVGVTAENVDFEP-------
#oth            5465311222127556353634...21.12.2..22221142.5.133142631111111
VNG1987         SANT::::::::S:QQ::T:DP:::N:::E::::V:L:TTVT::::DG:SVT::::::::
NP2522A         :DP:GEQPVGQV::DV:T:SQ:::::F::E:::::QV:::FI:M:VS:LE:G::::::::
hla1287         Q::PG:::::::ENVSE:QQ:::::::::D:A::::V::::::Y::TE:::GG:::::::
HQ3097A         :PDS:::::::::SAVVQQSSQ:::::::E:A::::V::::::::::E:E::::::::::
Hbo1845         EP:NA:::::::AP:::T:T:P:::KF::E:::::::T:::::L:::::Q:ND:::::::
HVO_1976        ----::::::::QSPIGEDDSA::::F::::D:::::::::::::::D:E::G:::::::
Hmu2551         A:G:N::ATAQTD:A::S:A::::::::I::D::S:::::I::I::::::IQ:VGRGDET
rrnAC3215       ::S:::::::::TE:AG::NQS::::::I::::::::Q::I::T:::G::VA::::::::
Hut0346         ----::::::::VT:G:DD:::::::::I::D:::S:Q::A::I:::D:NVRF:::::::

consensus       DEERDVEQAIADEL-GADPADVRA-----SAATGTVEVTQE----NVTTAELRAALDAAG
#oth            34453213533441332354.13114211634422.11265111121255324321334.
VNG1987         :N:GEIATR:STA::DV:RG:::::::::RP:::S:::Y:-::::::S:SS::TT:ED::
NP2522A         ::QG:I::TLQ::::DLGTG:::::::::D:ED:::::F:DEYVGGIERSDFA::MQE::
hla1287         :QPD::AR::::::EN:SAS:IT::::::VP:ESA:D::ET::::S::E:QF:::M::S:
HQ3097A         ANA:E:::R::TAID::G::::I:RPV::TET:::::::V:::::G:S:T::QSI:EST:
Hbo1845         ::P:V:::NV:A::E::TSS::T:RL:::::NAS:::::A::::::I:EQ:F:S::::S:
HVO_1976        :S::V::RQV:AQIA:::A::IIVRT:::G:ESS:::A:I::::::::ADD:S:::::::
Hmu2551         N:TIAI:DELVSQ:::V::V::N:RAPNEPN:D:::::YT::::::::Q:::A:::QEQ:
rrnAC3215       AD:A:LA::T::R:::L::I:::V::::::NQ:E::::FSN::::::S:G:VE:::E:E:
Hut0346         QQ:TAL::NLSES::SL:L::I:V::::::NESS::::FVR:::::::HDQ::N::N:E:

consensus       YA--PGDVRDGVTGATRDEMVRVINDKINEAGLSGGSVQQVTTATGQ--HFILVEVPGRD
#oth            .512533.16...44..344241153114231.2.1213434244.5114223111.232
VNG1987         :S:::DS::R:::Q::::NI:SI:GS::DAT::G:AE:KDIE:SA:AQA:Y:V:::::QN
NP2522A         :SVDT:::GM::::D:::GVED:L::RLR:R::G:::AA::SAP-::::Q:MV:::::A:
hla1287         ::::YE:::S:::QE:::VAQ:::E:::D:T:::::T::::QSL::E::Y::::::::EN
HQ3097A         :T::AST::T:::ET::Q:V::ILEN::::::::::T::E::::G:G::::::I:::NE:
Hbo1845         :Q::YET::E:::A:::E:V:G:L:::::::::::::A::::::::::::::R::A:N::
HVO_1976        ::::H:E:::::::T::A:T:::LQS::::::::::T:::::::::E::::::::::N::
Hmu2551         :DVSES:::::::R:::::::E::DE:LSQSA:::::::SAQS::::::N:VVI:A::::
rrnAC3215       :E:::SE::P:::RD::EN::S:::::LR:SA:T:::::::SSPG:R::S::S:TA:D:G
Hut0346         :Q::::T:::::::Q::ED::D::R:::T:SA::::::SRLNAIE:-::NL:SITA:D::

consensus       RSEVRSLVEERGTVRVDAYYPG--DNGSYV---REQVLSQDDFADIGTAQEDQSG-GA--
#oth            4341431252..3.4242522612311352121655216232254214133626462411
VNG1987         A:Q:Q::IQG::Q:TL::::::::S::TN::::NAT::RG:ELVEVDQPKR::N:RP-::
NP2522A         :ET:VD:IG:::Q:EIW:LF:::::D:D:E:::TRSL:D:::L::::Q:RQ:D--::Y::
hla1287         ::S:T::L::::::QI:IA::T::E::TA::::E:E::T:::::EL:S:AQNDR:T::::
HQ3097A         AAS:::::S:::::V:Q:H::-::QDDI:T:::QQT::Q::N:QS::S:::G::::::::
Hbo1845         T:::QK::S:::::V:K::::V:EQ:::TTYK:SKI::ERE::Q:::::::T:::PAV::
HVO_1976        Q:D:VD::G:::::QI:I:::TGT::::RTYET::A::T:A::TS::::::S:T:S::::
Hmu2551         ID:L::I:AN::I:::YGG:AA:::::TF:::::Q:IV:RE:IDG::N:RKVDGRQ:Y::
rrnAC3215       :E:LIG:L::::V:::Y:VHDN:TE:::::::::::::::G:::G::A::RSETQ::T::
Hut0346         :E:L:::LN:::I:::Y:VH:D::E:::F::::PS:::G::E:GR::::::REVAD:TEA

consensus       FVPVTVR-------ESAAERFQQAMVDTGFAQPGGS---R----CDY------EENPNNS
#oth            411132411111113322631443343422444526111111231513111126534454
VNG1987         ::::QLS:::::::AE::Q::TGD:TQY::TSQA:I:::-::SN:RF::::::---::G-
NP2522A         Y::IRLD::::::::Q:GP::G:::R:H::D:D::V:::::::::N:DLSRSL:::LDDE
hla1287         Y::::::NTAPEGEQ:P:HS::::VA:R:::AAYN:NQD::::::::::::::S:::DDV
HQ3097A         Y:::::::::::::::::NE::::T:::TL:R:::T:::::::::T:::::::-SRDQ::
Hbo1845         --::::K:::::::::V:PE:::T::::RV:R:::::::::::::E:::::::DQ:::S-
HVO_1976        ::::S:::::::::DDP:AE::T:IQ:::L:::::T:::::::::T:M::::::DGGR:T
Hmu2551         R:S::I:::::::::D:VDQ:LDGVRA::LDE:NTA::::GAIS:E:N:::::A::::Q:
rrnAC3215       H:::::K:::::::Q:V:::YAND::EA::GSGSTC:::::::DS::D:::::H::LQ::
Hut0346         :::::IN:::::::DDV::::::D::EY::N:DRN-:::-:::::G:D::RSQIT:VSAV

consensus       TEPCLLTVLNGEVVNSFGMDPGLADSMASGEFANDPSFRLQTN-NMSEARELAINLRAGA
#oth            546..333111.3133311414.342335.412521413321613423.44222212..2
VNG1987         -GY::::K:D::E:YNAS:G:T::RTLS::K:V:N::::ITA::S:TA::N:QV::Q:::
NP2522A         PGR::M:::D::::FAA:VN:N:SS:F:::A:DD:::Y:TT:T:SFED::D:E::M::::
hla1287         SN::::LTVD:::::::::::D::::::::SW:T:GG:::T:G:EF:::ERI::::::::
HQ3097A         ::::::L:V::::T:::::A:R::::LRG:SW:Q::V:Q:::A::V:::Q:V::::::::
Hbo1845         ::S:::V:VD:::::::::AGR::G::QR::W:K::G:Q:::L:S::::QQV::::::::
HVO_1976        ::G:::L:V::::::A:::SG::::T:RA::W:GA:::Q:::R::T:::Q:I::::::::
Hmu2551         SGK::IAS::N:::TAK:VS:::VQLF:D:S:::::T:VIE:::TRE:::NIELS:K::Q
rrnAC3215       QAD::V:T::::P:FIG:V::::GQ:YRN:::::N:Q:IM::S::::::T::ELA:K::R
Hut0346         DDY::V:T::::I:F:G:V:GD:GR:F:::G::T:::::MT:GE::TQ:KD:E:S::::R

consensus       -LPAPLDL---DNGTSSYISPAQGENFKTDSLITGIAAVLAVSGMVFLRYGDPRVALPMI
#oth            1.1141132135523254232221351264..21.24.22..132123..33241.3..2
VNG1987         ::::EITV:::--QN:Y:VA:SFAQKY:PL::V::L::AI::AI::L::::E:KI:I::V
NP2522A         ::RTE::I::DNR:::FFLL:SLA:R::AL::V::A::IF::AV:::F::RK:E::A::L
hla1287         ::::D::I::SGQ:::RS::A:::::Y:NY::V:::L::F::A:::::::RE:A::::::
HQ3097A         ::::K:::TGD:G::T:F:::S:::::R::::LA:LV::F::::V:::::R:A:::::::
Hbo1845         ::::K:::SGE:G::T::::SG::AS::I:::::::I:::::::V::V::S:VK::A:::
HVO_1976        ::::R:::SGE:S::::::::S:::S::F:::::::V:::::A:V::I:::K:Q::::::
Hmu2551         P::::::F:::Q:AQTTSLE::LADQ:::N::::::I::::::IA:Y:::::::::V:::
rrnAC3215       :::::::F::::SAE:QTL:S:LAQE:QQR::L:::L::I:::LV:Y::::R:E::::::
Hut0346         :::::::F:::E:ANYQELE::L:QQ:R::::::::M::::::::I:F::Q:V:::::::

consensus       VTALSEVYILLGFAAAIGYPLDLSHIAGFIAVIGTGVDDLIIIADEVMQEGEVSSRRVFQ
#oth            2.121..33....114322112.111....1.1...1...1.....114225141311.2
VNG1987         F:::A::V:::::::VS:LA:::::L::::::::::::::V:::::::T:-Q:::S:I::
NP2522A         L::G::::::::::::V:L:::::::::::::::::::::V:::::I::Q:D::TSK::E
hla1287         ::::A:::A::::::LLS::VE:AV:::::::V:::::::V:::::::S::::N::K::D
HQ3097A         :::::::L:::::::G::::::::V:::::T:::::::::V::::::LA::G::::::::
Hbo1845         :::::::V::::::::::::::::V:::::::::::::::::::::::A:::::::::::
HVO_1976        ::G:::::::::::::::::::::V:::::::::::::::::::::::G::S:K::K:::
Hmu2551         :::::::LL::::VS::QF:::::::::::::::::::::::::::IL:REG:ATG::::
rrnAC3215       :::::::F:::::V:FVQ:::N:::L::::::::::::::::::::IL:Q:K:ETG::::
Hut0346         :::M:::FV::::V:LVQ:::N::::::::::::::A:::::::::IL:RE:IATD::::

consensus       SRFRKAFWVIGAAAATTIIAMSPLAVLSLGDLQGFAIITILGVLIGVLITRPAYGDILRR
#oth            1..11.1...........2.....21.1....3...12..1..11...1......12..4
VNG1987         ::::::L:::::::::::L:::::::::::::R:::LV::::::::::V:::::::V:::
NP2522A         :::K::::::::::::::L:::::::::::::::::::::V::::::::::::::::::I
hla1287         ::::R:::::::::::::::::::M:::::::S::::F::::::::::::::::::::::
HQ3097A         ::::R::::::::::::::::::::I:::::::::::F::::::V::::::::::::::A
Hbo1845         :::::::::::::::::::::::::::::::::::::F::::::V::::::::::::::A
HVO_1976        ::::R::::::::::::::::::::::::::::::::F:::::IV:::V::::::::::L
Hmu2551         N:::::::::::::::::::::::T::G::::T:::::::V:::::::::::::::::::
rrnAC3215       ::::::::::::::::::V:::::M:::::::S:::::::V:::V:::V::::::::::S
Hut0346         N:::::::::::::::::::::::T::G::::S:::::::V:::::::V::::::NF:::

consensus       LVTDDR----
#oth            .215451111
VNG1987         :L:T:T::::
NP2522A         ::LE:D::::
hla1287         :L:VR-::::
HQ3097A         :T:GNL::::
Hbo1845         :T:N::::::
HVO_1976        :L:E::::::
Hmu2551         ::L:EEERSE
rrnAC3215       ::L:ED::::
Hut0346         ::L:T-::::