|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2679 | HQ1691A | NP2978A | hla2686 | VNG0867 | HVO_1050 | Hbo0545 | Hut1421 | Hmu1879 | rrnAC1359 |
1607 | HQ1691A | 3260 | 1393 | 1404 | 1350 | 1657 | 1569 | 1297 | 1449 | 1361 |
1887 | NP2978A | 1393 | 2726 | 1415 | 1516 | 1611 | 1561 | 1548 | 1547 | 1668 |
1794 | hla2686 | 1404 | 1415 | 2911 | 1432 | 1673 | 1610 | 1520 | 1512 | 1474 |
1892 | VNG0867 | 1350 | 1516 | 1432 | 2704 | 1633 | 1528 | 1582 | 1486 | 1664 |
2132 | HVO_1050 | 1657 | 1611 | 1673 | 1633 | 2718 | 2042 | 1616 | 1685 | 1732 |
2033 | Hbo0545 | 1569 | 1561 | 1610 | 1528 | 2042 | 2675 | 1590 | 1645 | 1679 |
1976 | Hut1421 | 1297 | 1548 | 1520 | 1582 | 1616 | 1590 | 2794 | 1617 | 1734 |
1961 | Hmu1879 | 1449 | 1547 | 1512 | 1486 | 1685 | 1645 | 1617 | 2730 | 1770 |
2029 | rrnAC1359 | 1361 | 1668 | 1474 | 1664 | 1732 | 1679 | 1734 | 1770 | 2697 |
452 symbols consensus ----------------------LRGADPDTVRDAIESGDPLPGTRGFAGEL-DG------ #oth 111111112222223222231421.124341431245522.2.23....31222221111 HQ1691A MMSGPPTNPPGQPQSSTKNESI::::STE::H:::SDTIA:A::G::::YI::::::::: NP2978A ::::::::::::::::::::::MQ:TAVEA::ECL:TKA::A::C::::::::::::::: hla2686 ::::::::::::::MTTPSSSD::::S::RIC::LRG::::::G:::::L:R:PPNREGP VNG0867 ::::::::::::::::::::::M:::A::A:L::VQ::::::::G::::::P:::::::: HVO_1050 ::::::::::::::::::::::M:::S::L::R:LAER::::::A::::::::::::::: Hbo0545 :::::::::::::::::::::M:::::ET:::A::::S:::S::A:::::::N::::::: Hut1421 ::::::::VTMVSVPSDPSPSR:Q:::::V::A:::A::::::::::::R:::::::::: Hmu1879 :::::::::::::::::::::MI::::ASL::R::RDR:S:::::::::R::SAEGR::P rrnAC1359 ::::::::::::::::::::::MQ:::A:::A::LA:D:A:::AG::::::::::::::: consensus RLVRDVLGRQPLFVERA-----------DPGAWSFDPTDLADPVPVPAGHVRTADG---- #oth 411......41314135432333111124457.122235.42.452.1.44356442132 HQ1691A M::::::::::I:L:T:TQSSHG:::::VMPD:A:N:LS:EA:ATL:P:A:YDPSQRAIS NP2978A GV:::::::Y:A:T:PE:::::::::::T:S:::P:::::SE:E:::::CI::::::::: hla2686 V::::::::E::::::GGADPASGGDPT:S:I::::R:::D::E:::::T:ASSA::::: VNG0867 ::A::::::RLCY:---::::::::::::GDE::H::R:::A:TLL::::::APGA::TG HVO_1050 :::::::::::::S::::::::::::::::AK::::HR::D:::A::::RA:QTA:EAAG Hbo0545 T::::::::::::S::N:::::::::::::ET:A::RRE:::::R::::TR::D:::::: Hut1421 :::::::::Y::::::D:::::::::::N:DS:::E:GK::::::::::T:QDGET:::: Hmu1879 T::::::::V:::A::GAADPT::::::AD:::A::::T:G:::S:::::C::::E:::: rrnAC1359 T::::::::Y:::::::VSDEAR::::L:::Q::H:::A::::RSF::::I:NES::::: consensus -DRRV----------------------------------WSLPDPAP---TDRDAAVDAV #oth 245431111111111111111111111111111111111.1..53431156243313441 HQ1691A D:DIIYMDDNTSIDDANSDQQGNTVDVDVEIRHLDIARY::::K:PV::T::N:E:YRR: NP2978A :::Q:::::::::::::::::::::::::::::::::::::::::E:::VA:T:R::S:: hla2686 :AE:::::::::::::::::::::::::::::::::::::::::EE:VDAESGQ::::EA VNG0867 SG:P:::::::::::::::::::::::::::::::::::::::E::::::-TG:EP:ER: HVO_1050 D:E::::::::::::::::::::::::::::::::::::::::::PA::A::::::L:R: Hbo0545 ::K::::::::::::::::::::::::::::::::::::::::T:::::E:::E::LAN: Hut1421 :VTQW::::::::::::::::::::::::::::::::::::::Q:S::::RSGRR::::: Hmu1879 ::DAR:::::::::::::::::::::::::::::::::::T::EGDR:::S:D:T::A:: rrnAC1359 :TQQR::::::::::::::::::::::::::::::::::::::SLD:::FG::ET:IET: consensus RDAVDTAID---AVDT-DGLAVAFSGGVDSALLAAGL-DAPLYVAGFEGSHDIAAAREAA #oth 55127333411142453532.1.....1..212..22112.1..2.13211.13..1211 HQ1691A KK:II:QTQKQTTDNSNKST:I:::::I:::VV:::RPN::C:::::D:C:::T::Q::L NP2978A A::I:A::::::S::-:GAP:::::::I::S::::::::G::::G::::::::T:::S:: hla2686 LG::LGE:K:::TEANRND::::::::I::GVV::AVP:::C:::::::C:::E:::::: VNG0867 ::::AG:LG:::G:PAG:D:::::::::::::A::A::::::::V:YAD:S:::::::S: HVO_1050 ::::FESVR:::S::D:::::::::::::::VV:::VP:::C::::::::::V::::::: Hbo0545 ES::HG:VQ:::N:ES:E:::::::::::::VV:::VP:::C::::::::::V::::D:: Hut1421 :S:L:::L::::::E::::::::::::::::::::R:::V:::::::PE:::VR:::::: Hmu1879 :R:IR::T:::::::::AST:::::::::::::::R:::::::::::::::::::::S:: rrnAC1359 GET:E:S:::::::::::S::I:::::::::::::R:::::::::::PD::::E:::S:: consensus AAMDR--DLRVVELTHDDLERAVPEVVAATGRTNPMDVQIALPLYLVAERVAADGFDRLA #oth 4112322212.2.321321331215213121.211.1221211.114.421.3..31..1 HQ1691A S::::NA::H:I:IS:T:IIE:I:QL:S:I:::::::LA:TV::FI::R::::::::::: NP2978A DLL::::RV::::F::A:::::T:T::E::::S::::::L::S:::I::A::E::H:::: hla2686 T::EL::::::::I:::::V:::GA:A:::::R:::::A::V::::A::AA:T::I:::: VNG0867 :::G:AD::::H:V:LA:I:A:::T:AR:I::::A:A:::::::F:::A:A::::YS::V HVO_1050 :::::::::T::::::EA:::::::I:::L:::T::::::V:::::L::::::::Y:::: Hbo0545 D::::::E:H:::::::A:RE::::L:SVL:::::::I::V:::::::KQ:::::::::: Hut1421 :LL:A:::::::::D:AL:::T::D:::::::::A:::E::V::::::S:A:T::::::: Hmu1879 ::L::::E:T:::F:::::VS:::RIAR::::::A:::::::::F:T::::::::Y:::V rrnAC1359 ELLGT::EV::::::::AI::::::IAR::A:::A:::::::::::::::::G::::::: consensus VGQGADELFGGYAKVAKAPDDPRVEADTVRGARREVVATLPDQLERDVLALRAAGVEPVA #oth 1...........1..3111413.24.2.1...31.42611.4.11..3122.11.11.11 HQ1691A L::::::::::::::Q:::T::::N:T:I:::Q::LLN:V:K:A:::M::I::G::::IT NP2978A L::::::::::::::::::A::::D::::::::::::GS::S::::::::V::::I:::T hla2686 ::::::::::::S::VNPAG:D::A:E::::::T:T:R:::E::D::::::::::::::: VNG0867 :::::::::::::::::::T:::TD::::::::::T:QS::A:::::LR::::::::::T HVO_1050 :::::::::::::::Q::::::::::::::::A::MIL:::::::::L:V::::::D::: Hbo0545 :::::::::::::::E::::::::::::::::AT:M:R:::E:::::::T:::::::::: Hut1421 ::::::::::::::::N::EHS::G:::::::H::GLE:::::::::I::I::::::::: Hmu1879 ::::::::::::::::N::::H:I::::::::Q:::I::::E::::::::::G::::::: rrnAC1359 L::::::::::::::::::E::::::::::::Q:::I:S::::::::::::::::::::T consensus PLLHDRVVEAALALPGELLVSGDT-RKVALRRAA----REWLPDSVADRDKKAVQYGTYA #oth .1.3.42142..5.2233.142352..4.1.41111114461.2411512...2...112 HQ1691A :F:::SI::S::T::ES:::C::Q:::I:::M::::::DGIV:E::RTAS:::::::::V NP2978A :::C:G::S:::R::A::::A:::::::::::::ETVPDGGV:ADIR::E:::L:::SLL hla2686 :::D::L:A::::::::::A:D:E::::::::::::::TDRV:E::RTA::::::::::V VNG0867 :::::D::R::::::::W:::::::::R:::E:::::::S::::A::::::::::::SLV HVO_1050 ::::::::S:::P::E:F::D::R:::::::E::::::SGV::E:::EA::::::::::: Hbo0545 :::::D::S:::P:::::::ADSR:::::::EV:::::G:LV:::::SA::::::::::: Hut1421 :::D:H::::::S:::R::::PRGD::Y:F:L:T:::::A::::RI:F:E:::L:::SLV Hmu1879 :::S:G:::T::G:V::Q::R:EDE::W::::::::::S::::EEI:R:::::::::::: rrnAC1359 :::::::IG:::R:D:D:::D:E::::::::A::::::::S:::EI:::::::A:::SL: consensus ARELDRLARQAGFKRRMDNHVTQYVESLIE-- #oth 1..3.....11.1....12.231.23214522 HQ1691A S:::::::::D:::::::H:IQK::H:::K:: NP2978A :::F::::::::::::::::LGK:I:DRCQDA hla2686 S::I:::::R::::::::D::G::LDA:LAEQ VNG0867 :::V::::::::::::::D:::::::AR::E: HVO_1050 S::::::::::::::::E:::Q::::::V::: Hbo0545 ::::::::::::Y::::E:::E:::Q::::E: Hut1421 ::::::::::::::::::::::::::::KG:: Hmu1879 :::::::::RD:::::::D:::K:::::L-:: rrnAC1359 ::::::::::::Y:::::D:::::::::V:::