|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3158 | NP2918A | VNG1014 | Hut0432 | rrnAC0540 | Hmu1495 | HQ3359A | hla0817 | HVO_1302 | Hbo0240 |
1988 | NP2918A | 3043 | 1688 | 1743 | 1633 | 1728 | 1568 | 1633 | 1703 | 1732 |
2081 | VNG1014 | 1688 | 3373 | 1616 | 1715 | 1825 | 1603 | 1732 | 1821 | 1868 |
2193 | Hut0432 | 1743 | 1616 | 3080 | 1863 | 1931 | 1684 | 1779 | 1760 | 1821 |
2144 | rrnAC0540 | 1633 | 1715 | 1863 | 3381 | 2181 | 1660 | 1748 | 1802 | 1860 |
2238 | Hmu1495 | 1728 | 1825 | 1931 | 2181 | 3375 | 1664 | 1837 | 1908 | 1941 |
2127 | HQ3359A | 1568 | 1603 | 1684 | 1660 | 1664 | 3363 | 1852 | 1950 | 2060 |
2279 | hla0817 | 1633 | 1732 | 1779 | 1748 | 1837 | 1852 | 3591 | 2036 | 2010 |
2426 | HVO_1302 | 1703 | 1821 | 1760 | 1802 | 1908 | 1950 | 2036 | 3215 | 2229 |
2410 | Hbo0240 | 1732 | 1868 | 1821 | 1860 | 1941 | 2060 | 2010 | 2229 | 3327 |
523 symbols consensus -------------------------------------MAGETLPGTDARD---PDRIVLH #oth 111111111111111111111111111111111111124443..134643133432114. NP2918A :::::::::::::::::::::::::::::::::::::--MPQ:::V:P:-:::-RQV:C: VNG1014 MINGRNAWLLAGTRGVHAGGGRAVRSLFRADGEPPVMP:::R:::AP::E:::-E:::V: Hut0432 :::::::::::::::::::::::::::::::::::::-----::VEST:E:::-::::C: rrnAC0540 ::::::::::::::::::::::::::::::::::::::DAAR::::S---::G:EQ::A: Hmu1495 ::::::::::::::::::::::::::::::::::::::D:AR::::PTD::::G::::A: HQ3359A ::::::::::::::::::::::::::::::::::::::R::::::::NST:NT::Q:I:: hla0817 ::::::::::::::::::::::::::::::::::::::::G:::::::D:DAGS::::F: HVO_1302 :::::::::::::::::::::::::::::::::::::-VE::::::ADD:::G::S:::: Hbo0240 :::::::::::::::::::::::::::::::::::::::::::::VTRKE:RADA::::: consensus VDMDCFYAACERLREPALRDEPVVVGMGYEPGETHGAVATASYEAREYGVESAQAISEAL #oth ..1.....1..11.1.3.222.111...1.21244...........12.11..12.14.. NP2918A ::V:::::::::::::K:::::::::::::::AD:::::::::::::H:::::M:::::: VNG1014 ::::::::S:::R::::::GA::::::::::DQ:V::::::::::::::::::::::A:: Hut0432 :::::::::::::::::::::::I::::::::::S::::::::::::H::::::S:EQ:: rrnAC0540 :::::::::::QR::::::N::L:::::::N:A:::::::::::::A::::::M:::::: Hmu1495 ::::::::::::R:::P:EG::::::::F:::::::::::::::::::::D::M:::A:: HQ3359A ::::::::S:::::::::::V:::I:::::::::F::::::::::::::I::::P::H:: hla0817 ::::::::S:::::R:E:A:::L:::::::A::AI:::::::::::AF:::::MP::::: HVO_1302 ::::::::::::::::E:EG:::::::::::::G:::::::::::::F::D:::P::T:: Hbo0240 ::::::::S:::::::E::G::::::::::A::SF::::::::::::::ID:::P::Q:: consensus ERLPRRVDADPD--------PAPAGYYRPVDMDFYESVAEDVKAILHDCADVVREVSIDE #oth 31..1344354311123243544313.12..131.22.124.34113341221.2..1.. NP2918A K:::Q:T:SESG::::::::E:GT::::::::AY::::S:::Q:V:D:T:ET::N::::: VNG1014 :::::KA::PDA::::::::-SA:::::::::AY::::S:S:SE:::GLG:P:::::::: Hut0432 :L::::ET::::::::::::AE:TA:::::::PY::D:S:Q:RS::AEY:::L:A::::: rrnAC0540 :::::K:K:VA:::::PDLTVED::F:::::::::::::A::RE:::TE::::::::::: Hmu1495 G::::K:::VE:::::PALDV:D::F::::::EY::::S:R:R::I::::P::::::::: HQ3359A :::::ADVDE:NGADDTDTESN:S::::S::L:::Q:::AE::D:::::::::::::::: hla0817 DL:::::N::::::DPDAPD:DE::R:L:::L:::KE::S:::TV:R:::::L::::V:: HVO_1302 :::::ID:LG:G::::::DD::A::H::T::LE::K:::A:::::::::::::::::::: Hbo0240 ::::QIEN:AD:::::::::-E:G:H::::::E::K:::SE::E:::::::::::::::: consensus AYLDVTDRTAWDTA----------------EGFARHLKQRIAREVGVPASVGVAPNMSAA #oth ....211223.36232321111111111112431352.33.4331..3..1.1..2.11. NP2918A ::::LG:LA-::D::::::::::::::::::A:G:Q::AD:EAAA::V::::I::T:AT: VNG1014 ::::::::::::V:::::::::::::::::A::G::I::::::S::::::::I::D::T: Hut0432 :::::::::D:ESV:::::::::::::::::T::TE::DE::ET:::E:::::::T:::: rrnAC0540 ::::::E:VS:E:V::::::::::::::::MSW:QD::DT:ESA:::V:::::::T:::: Hmu1495 :::::::E:D:N:V:::::::::::::::::QW:AR::DE:RST:::::::::::T:::: HQ3359A ::::I::::::QQTESGD::::::::RTLA::Y::YV::::M:T:::::::::::::::: hla0817 ::::::::::::A:GGESTATGPAETRTLA::Y:::I:E::E::A:::::::::::::T: HVO_1302 ::::::::::::L:ASGD::::::::RTLA:::::YV::::::::::A::I:::::::T: Hbo0240 :::::::::::Q:VEGDD::::::::RTLA::VG::V::::S:::::::::::::::::: consensus KIASDHDKPDGLVVVEPGSVRSFLAPLPVAEVHGVGPVTARELAELGIETAGDLAAADPA #oth .2...42..1..1113.23.43.132121232.1...111441432222.1.11.3..36 NP2918A :L:::AE::::::I:D:D::AT::K:I::::L::::::::A::R:R:Y:::::V::::ET VNG1014 :L::::E::::::::P:E::Q::::::D::DL::::::H::A:R:R::::V:E::D:::Y Hut0432 :::::Y::::::T:::::D:::::::::::A::E:::K::T::::M:::::::::::::: rrnAC0540 :V:::R::::::::::::A::E:FDD:::ED:::::::::::::A:D::::::::::::E Hmu1495 :V:::R::::::::::::D::D:F:D:::ED:::::::::E::DD::::::::::S:::D HQ3359A ::::::Q:::::::I:::::A:::S::::ESI::::::::DR:S::EVR::::::T::RK hla0817 :::::A:::::::::P::E:E::::S::T::I:::::::E:T:::::::::::::::::D HVO_1302 :::::F:::::::::R::E:::::::IS:E:::::::::::K:GS::::::::::D::A: Hbo0240 :V:::::::N:::::P::::SE:::::S:T:::::::::::KM::M::Q::::::::::S consensus VLEERFGERGREIYRRARGEDDREVTPTGRPKSLSRESAFADATDDEERKREQVRALAAD #oth 4.323112.1232342.1.5.3.5.1.3.3.1...1..114611415352335333.142 NP2918A A:VDA::::::D:::Q:::::::V:E:K:::::::S::::PKP:::GD:::RKLT::::: VNG1014 :::AA:::::::FH:::::A:S:P:E:R:K::::::::S:DG::ESFD:V:::AA::SGA Hut0432 A:AD:::::::A:::Y:::::::D:::V::::::::::SL:P:EG:T:TV:::::T::EA rrnAC0540 L:A::::::::::R:Y:::::E:S:::K:D::::::::::T:::T:I:A:CR:::T::DA Hmu1495 ::::::::::L:::SY:::::::::::R::::::::::::TE::::RAELGDR::S:::S HQ3359A R:T:VLDS:AETLSK::M:N:N:::::::K:Q:::::::::A::E::AQ::DAISG::T: hla0817 R:ADEL:D::::L::::::D:::::::::L::::::::SLS-::A:::::::T::::::: HVO_1302 :::AE::S::::LHE::::Y:::A::::::::::::::::T:P:::IKD:::V::::::: Hbo0240 T::::::S::::L:D::::V:::A:::::::::::::::::E::E:T:E:ANV:T::::: consensus VADRARRRGALYRTIGIKVVTPPFDVNTRARSLSGPVDDPELVESVALDLLD-EFADAAV #oth .13..442213.1.1.1.2.5..1113..13..1..11213.1241132..311.22642 NP2918A :TE::TAKD:::::V:::::E:::::H::E::::::::::K:::EI:V:::A:::D:P:: VNG1014 :::::S:TN:S:::::V::::::Y::Q:::E::P::::::A:L:A:SQS::::::EG::: Hut0432 :::::N::D:::::::::::S::::IH::E::::::::R:D::R:::::::S:A:::RE: rrnAC0540 :::::E:K::R:Q::::::::::::::::::::P:::EE::::RRI:::::G:::::DP: Hmu1495 :::::TSKD:::Q:::::::R::::::::::::P::::E::::::::::::::::EGQR: HQ3359A ::A::NQ:::::Q:::::I:I::YE:R::E::::::IE:AD::VD::CE::S:::EEE:A hla0817 ::R:::E::C::::::::A:E::YE::::::::P::::::D::::::::::G::::GDR: HVO_1302 ::::::S:::M:::::::::V::::I::::T:::::::::::::::::::::A:::ETT: Hbo0240 ::E:::S:::M::::::::::::Y::::::Q::::::::::::RE::::::S:::E:::T consensus RKVGVRVSNLSFAAADQASLD--GWDGANADEE--------------------------- #oth ..2..1..2.2.3231.13.2112143354354342422222222423244222222223 NP2918A ::L:::::::::DDRE::T:G::Q:ADGT::Q:::::::::::::::::::::::::::: VNG1014 ::::::::::V:SERE::T:A:::FS:DETG--::::::::::::::::::::::::::: Hut0432 :::::F::G:::S:G:::::G::E::D:GG:T:::::::::::::::::::::::::::: rrnAC0540 ::::::::::D:S:GE::N:::::FG:D:GS::ASGSSRTSSTPAAADELDDDGQVGLGT Hmu1495 ::::::::::::T:GE::::G:::FES::D:TATTGP::::::::GADEVNDDG::::AS HQ3359A ::I:::::::::::::::Q::ACE::SDRS---::::::::::::::::::::::::::: hla0817 ::L:::::K:D::ES:::T:G:::F:ASGGGRGTAGGDSGADRDRESEAQSVATDGEGGK HVO_1302 ::L:::::K::::D:::S:::::::ES:E:G:-::::::::::::::::::::::::::: Hbo0240 ::::::::::::TD:::S:::::::E::S:SATEDAT::::::::TAGAMED:::::::: consensus -PVADGDERAAGAAGNAGDDA-----P-RDGQTSLGDFD---- #oth 4446434456543676546753444545841.42142172111 NP2918A :::RLSHV:RS:E--------:::::-:T:T:LE:SQ:E:::: VNG1014 :---::GGHEG::C:G::RGS:::::-:CG:::T:DE:T:::: Hut0432 :T::HD::T:TSFRSPS:NQR:::::-:LS:::T:A::R:::: rrnAC0540 FVAN:::TE:VEDTAGE:T::SETHISLPP:::T:AE:-:::: Hmu1495 E:AP::QVTLT:::WAE::ASDDAAT:AV::::TID::CK::: HQ3359A :C:PTAPVDD:PDDN:TK:INEYPHQ:YSS::V:::E:GTEHD hla0817 LTDWV:G:PN::D::E:DETGDRPTSETG:::A::::WS:::: HVO_1302 :TGG:::::VSDEPP:T:GE:::::::S:G::S::VE:::::: Hbo0240 A::::SPAEDIP::EQPTE::EDSGWAAEN::V::::::::::