|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1450 | Hbo1325 | hla1479 | rrnAC2773 | VNG1618 | Hmu2720 | rrnAC0982 | Hut0588 | Hmu1666 | Hbo2660 | hla1970 |
742 | Hbo1325 | 1400 | 868 | 466 | 467 | 613 | 550 | 588 | 580 | 571 | 536 |
704 | hla1479 | 868 | 1345 | 487 | 520 | 616 | 527 | 554 | 570 | 549 | 527 |
821 | rrnAC2773 | 466 | 487 | 1466 | 603 | 661 | 613 | 673 | 689 | 594 | 658 |
841 | VNG1618 | 467 | 520 | 603 | 1472 | 634 | 697 | 727 | 708 | 684 | 689 |
854 | Hmu2720 | 613 | 616 | 661 | 634 | 1361 | 676 | 691 | 678 | 632 | 642 |
1020 | rrnAC0982 | 550 | 527 | 613 | 697 | 676 | 1453 | 971 | 998 | 933 | 996 |
1150 | Hut0588 | 588 | 554 | 673 | 727 | 691 | 971 | 1438 | 1098 | 892 | 922 |
1119 | Hmu1666 | 580 | 570 | 689 | 708 | 678 | 998 | 1098 | 1475 | 892 | 962 |
1031 | Hbo2660 | 571 | 549 | 594 | 684 | 632 | 933 | 892 | 892 | 1507 | 983 |
1051 | hla1970 | 536 | 527 | 658 | 689 | 642 | 996 | 922 | 962 | 983 | 1470 |
210 symbols consensus MTET-RVVAICGSLRDGSYTRLALEHALDAA---RDAGATTELLDLREWDLPLFDPDAD- #oth .2453311112..1125.3.172244115111114611233432..2342..43121541 Hbo1325 ::--::I::::::R:E:::::KS::IV::::::::::::E:TMV::GDV:::::H::K:: hla1479 ::--::I::VS::RSAD:T::A::SV::::::::A::::E:GMI::GTV::::YH:AE:: rrnAC2773 :PD:PH:IGVS:::::E:G::I:VQ:::::::::AG::::VAHI::::::::::::::SA VNG1618 ::VDTH::::::::S:D:G::T::RTVF:G:TAVT:TEV::D:I::::LS::PR:G:DR: Hmu2720 :S:SPL::::S::::ET:T:C:::::::S:::::ET:::::::V:::::E:::::::DR: rrnAC0982 :S:P::::GVV::::EQ::::VGI:R::A:::::EET:::::::::Q:F:::V::A:HR: Hut0588 :S::::::::::::::N:H::KS:RI::E:::::EN:::S:::::::::E::V::A:RG: Hmu1666 ::R::N::G::::::E:::::QS:QI::T:::::QA::GD:D::::::::::V:::::E: Hbo2660 :::K:H:::V::::::Q::::R::::::VGV::::E::G:G:I::::AY:::SL:A:E:: hla1970 :SDSAH::GVV:::::::::::GVGR:::GV::::R::G:A:::::::Y:::TY:A:H:: consensus -DAGDAEALRARIREADAVILGTPVYHGSYSSPLKNALDYCGFDEFEDTTVGLLAVAGGG #oth 123.12532442123..2332.1.1...2313321121.111411333111.1111...1 Hbo1325 :EQ:ES:R:TRLV:K::G::I:S:::::::::TFR:FH:::SK::Y:::A:::V:T:::: hla1479 :VQ::S:R:TRLV::::G:LA:::::::::::TF::FH:F::S::Y:N:A:::::T:::: rrnAC2773 A:S::GPE:A::V:::::MV::::::::TIA::::T:::::SIEDV:G::::I::::::: VNG1618 ::::::P:::::VAD:::LV::::M::::::A::::::::::R::LGG:::::VC::::: Hmu2720 ::R:::G::::L:AD::::V::::::::MV::A:::::::L:R:::R::::::::T:::: rrnAC0982 :E::::V:FADS:HA::S:L:::::::::::GV::::::::::::::HK::::::::::: Hut0588 ::::::::F:E:V:A::S:::::::::::F:A::::::::::::::::::I::::::::R Hmu1666 ::::::A:F:E::::::SIL:::::::::F:T:M:::::::::::::NK:::::C::::: Hbo2660 :EQ::S:VVVE::H:::::::::::::::::GV:::T:::::::::DGK::::::::::: hla1970 :E::::N:FKT::::::::P::::M:::::::T::T:::::::E::::K::::::::::: consensus FPGTALEHLRSVCRALNAWVIPHQVAIPNASSAF-EDGE---LVDDDIRERVETLGREAV #oth 11431.311.33525132122.2211223255531321511122.333451443.12512 Hbo1325 SY:G::::M::TI:GVHGH:V:E::GVRG:YNVY::GD:::::T:E:V:R:LVS:AESV: hla1479 SY:GT::::::TF:NVH::TV::E:G:QG::RYV::T::EPRIT:::L:R:T:::::VVT rrnAC2773 ::TPT:Q:::ASVLE:KG:PL:QD::::DSWA::::::T:::IA:G::I::::E::ASV: VNG1618 ::RQ::S:::G::D::D::TL::::GV:::ATTI:G::::::IT::::AA:AR:::EQ:: Hmu2720 SY:P::::::TGV:TVHG:TL::E:G:R:::D::DD::A:::F::A::EA::R::::MVA rrnAC0982 ::I::::::::::::::C::::::A:V:::RNHI:A::Q:::I::A::E:::V:::E::: Hut0588 ::I::::Q::T:S:::D:::::::::::R::::Y::::K:::::::EL::MI:V::A::: Hmu1666 ::V:::::::::G:S:DC::::::A:L:R:::::::::Q::::::EAM:D:::::::::: Hbo2660 ::V:::D:::::::::::::L:::::L::V::Q::DGD:::::::GGLEK::HV:::RV: hla1970 ::V:::::::::::::::::::::::V:R:HAQ::D::D::::::E:LDG::L::::R:: consensus AYA-RIEPDPASFESGENVGAD-------- #oth 24.253335357425544333321111111 Hbo1325 :E:R:LH:EA:QTARADD----:::::::: hla1479 EH:E:LRG--------------:::::::: rrnAC2773 :C::G:ADQREEA:QS:LATG::::::::: VNG1618 ::::NV:SF:ELTAA:ASPSQ-:::::::: Hmu2720 :N::AT::KA:V----------:::::::: rrnAC0982 Q:::N::::::C:::A::::::D::::::: Hut0588 Q:::H:::::::::::::::::D::::::: Hmu1666 Q:::N:::::Q:I::C::::::D::::::: Hbo2660 E:::::::::TT::A::::::GENVGAGGK hla1970 Q:::D:::::D:::GEQ::::R::::::::