|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2639 | VNG2281 | HVO_0670 | Hbo0863 | HQ1275A | hla2664 | NP5048A | Hmu0007 | rrnAC2356 | Hut0199 |
1878 | VNG2281 | 2643 | 1611 | 1650 | 1582 | 1495 | 1574 | 1758 | 1695 | 1728 |
1943 | HVO_0670 | 1611 | 2589 | 2032 | 1925 | 1527 | 1460 | 1717 | 1722 | 1697 |
1971 | Hbo0863 | 1650 | 2032 | 2636 | 2092 | 1528 | 1554 | 1762 | 1783 | 1765 |
1977 | HQ1275A | 1582 | 1925 | 2092 | 2653 | 1499 | 1541 | 1725 | 1773 | 1689 |
1951 | hla2664 | 1495 | 1527 | 1528 | 1499 | 2743 | 1730 | 1792 | 1859 | 1822 |
1997 | NP5048A | 1574 | 1460 | 1554 | 1541 | 1730 | 2539 | 1915 | 1900 | 1954 |
2251 | Hmu0007 | 1758 | 1717 | 1762 | 1725 | 1792 | 1915 | 2660 | 2233 | 2258 |
2293 | rrnAC2356 | 1695 | 1722 | 1783 | 1773 | 1859 | 1900 | 2233 | 3327 | 2257 |
2289 | Hut0199 | 1728 | 1697 | 1765 | 1689 | 1822 | 1954 | 2258 | 2257 | 2623 |
437 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2281 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0670 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0863 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1275A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2664 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP5048A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0007 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2356 MSRYIEAGLSDIGTLGEYVAERPNKGFEPARRRAGVSHTTVSGPKLAVAVMAVSAVCCPC Hut0199 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------MNMLVDGEWRTDA-YETTNEDGEFERQTTSFRDRI- #oth 111111111111111111111111133231.1.1.131233222..2.3.22.2..2211 VNG2281 :::::::::::::::::::::::::GRMI::D:::E:DMNEHSD::A:::D:::::HWV: HVO_0670 ::::::::::::::::::::::::::::YE::::::K:FVAN:::::::::::D::NWV: Hbo0863 ::::::::::::::::::::::::--::::::::::::::S:::::::N::E::::NW:: HQ1275A :::::::::::::::::::::::::::::::::::::::Q:::D::::D::E:::::E:: hla2664 ::::::::::::::::::::::::::Q:::::::::T:::A:DG::S:Q:GE:T::NW:A NP5048A :::::::::::::::::::::::::HQFL::::V:E-:::A::::::::::::T::::V: Hmu0007 :::::::::::::::::::::::::::::::::::::::Q::::::::::G::::::::: rrnAC2356 GCQCVLVTPLSPRSFTLCAHIIDT::T:::::::::::::::::::A:D::D:T::::V: Hut0199 ::::::::::::::::::::::::--:::::::::::::Q::::::A:::G::::::::: consensus --------EDDPDARFQPEAGRYHLYVSRACPWAHRTLLTRALLGLEDAISVSVVDPYRG #oth 11111111541223222221....1.212.......2132.3.2....2.2112.1.3.3 VNG2281 ::::::::G::----VP:A:::::::::Y::::::::::V:::::::::::::::::V:Y HVO_0670 ::::::::GE:--E::PV::::::::IC:::::::::AM::::K:::::::L:L:E:V:I Hbo0863 ::::::::R::A::E:PA:S::::::I::::::::::AM::R:K:::::::L:::E:V:I HQ1275A ::::::::VS:A::E:PA:S::::V:I:::::::::VAM::R:C::::D::L:::E:E:Y hla2664 GSDVPDHIDAE::D::::::::::::::Y::::::::::A:S::::::::D::::::::: NP5048A ::::::::--::E---EAT:::::::::Y:::::::::IA:R::::::V:::D::::::A Hmu0007 :::::::::::::::::::::::::::CL::::::::::V:S:K::::::::DY:::F:: rrnAC2356 ::::::::::::::::::::::::::AC::::::::I:VA:K::::::::T:DY:::F:: Hut0199 :::::::::::::::::::::::::::C::::::::::V::::K::::::T:DY:::::: consensus EDGWQFSPEK-GCTPDPVNGSDYLREVYTEADPEFTGRVTVPVLWDKQEETIVNNESREI #oth 32..2.231141121.4131422..13.42..233.1.......1.2432.1.....2.. VNG2281 DQ::T:D:::P:::::H:F:GTH::D::::::::Y:::::::::Y:TDAD:::::::E:: HVO_0670 D:::E::ED-:--L:::LY:EEF::DI:LR::D:::::::::::::::R::::::::::: Hbo0863 N:::E::A:-:--Y:::LY:E::::DI::R::D::::::::::::::ER::::::::::: HQ1275A ::::E::TD-:--Y:::LYDAE:::DI::R::::::::::::::::E:T::::::::::: hla2664 :G::::T:::E:::::KLH:::::::L:I::::DA:C:::::::::TE:G:V:::::::: NP5048A A:::::::::D:::::T:::F:::::A:VA:::NY:::::::::::TV:D:::::::::: Hmu0007 D:::::T:::A:::E:S:::::::::::QA::SGM::::::::::::RA::::::::E:: rrnAC2356 ::::::T:::A:::::T:::::::::::V::::DA:C::::::::::::::::::::E:: Hut0199 ::::::T:::D:::::T:::::::::::V::::DM::::::::::::::::::::::A:: consensus MRMLDTAFDDLAENDVDLYP----EGYREEVDRIIDEIYEPINNGVYRAGFADSQAAYDE #oth 1.2.322.233262112.4.11111123211.24224..1.1.....12...11.4..23 VNG2281 :::::V::::H:AR::::::::::::::D::::L:ED::D:::::::::::::::R:::N HVO_0670 :::::E:::P:::R::::N:::::D::E:::::LV::::::V::::::::::TT:E::E: Hbo0863 ::::::E::AH:KH::::W:::::::::::::ES::S::::::::::::::::::D:::: HQ1275A ::::N:::E--GS:::E:W::::::::::::::V:::::D:::::::::::::T:E::NA hla2664 L:I:S::::::G-::AS:L:TPDD:ATVAD::EV:T:::::V::::::::::T::::::: NP5048A L:N:T:V:A::G-:G:::S:::::::L:DDI:DAL:R:::::::::::T::::::::::D Hmu0007 L:::::E::AV:TR::::::::::::::::I:::::::::::::::::T::::::::::D rrnAC2356 L:::::E:::VSD::::::::::::::QD:::::::D:::::::::::S::::::S:::: Hut0199 ::::::E:::V::H:::::::::::::Q:DI:E::EA::::::::::K:::::::::::: consensus AVEELFDALDHWDDVLEDQRYLAGDRLTEADIAMFTTLVRFDEVYHTHFMCNRKLIHEYD #oth .1311.2..121241.21..111..31....21112..2...2......1..213142.2 VNG2281 ::DD::E::A:Y::::AE:::::::V:::::V::::::Y::::::::::K::::R:SD:: HVO_0670 :::::::::::::E::D:::F::::VV::::::::A::I:::H::::::K::K:A::::: Hbo0863 :IT:::::::::ES::::::FVV::V:::::::::V::I:::H::::::K:::RA::::P HQ1275A ::::V:::::::E:::D:::F::::K:::::L:::V::I:::H::::::K:::RA::::P hla2664 :ID:::G:::R:N:H:A:::::V::S::::::C:::::::::Q:::::::::K:FV:Q:E NP5048A ::A:::::::Y:NS::::::::V:::::::::::Y::::::::::::::::::R::R::: Hmu0007 ::D::::::::::A::A:::::::::::::::C::::::::::::::::::::R::EQ:: rrnAC2356 :::::::::::::T::::::F:::::::::::CL::::::::::::::::::H:::R::: Hut0199 :::::::::::::S::::::::::::::::::::::::::::::::::::::H:::A::: consensus NLWPYLRDLYQLPGVAETVNMDHIKEHYYTTHPDVNPKRIVPAGPDPDFEAPHDRDRLPG #oth 2..1.11112113.233.3322.132..131.2122.111225..3211424.1..2.22 VNG2281 :::::::E:C::::::D:LY:E:V:Q:::RS:GHL::::L::T::N:A:F::::::Q::: HVO_0670 :::N:TKE::::::::K:::::::VR::FVS:G:I:::::YGV:::L::D:E:::::::A Hbo0863 :::N:TKE:A::::::::I:I:::TR:::MS:G::::::L::V:::I::YDD:::::::A HQ1275A :::N:TKE::::::IKS:::I:::MR:::VS:D::::::L::T:::I::ST::N:::::A hla2664 H::::::::::TE::::::::A:::::::::::::T:TG:IAR:::L:W::A::::::DD NP5048A T:::::::::TTL:FG::TR:::::::::::::::S::::I::::A::::::::::E:A: Hmu0007 :::::::::::T:::S::::V::::::::::::::S:::::::::E:::D::::::E::: rrnAC2356 ::::::::::::::::::::::::T::::::::::S::::::M::::::::V::::E::: Hut0199 ::::::::V:TTD::::::DI::::::::::::::S::::::K::A::::::::::E::: consensus DLPAALAAD-------- #oth 22.46286333212211 VNG2281 GP::::NQ-:::::::: HVO_0670 ::::::T::D::::::: Hbo0863 ::::V:RG:AAPANE:: HQ1275A :::DT:QSETTAAVADD hla2664 EA:TPN::::::::::: NP5048A EP:V-----:::::::: Hmu0007 EP:ES:LETAD:::::: rrnAC2356 :::ET:FPTA::::::: Hut0199 GP::D:V--::::::::