Home |  Text search
[C] (HybA) COG0437 Fe-S-cluster-containing hydrogenase components 1
4 genomes BUD1921 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0830

rrnAC1214

HVO_B0364

-

Hmu3420

- - - -

Pairwise sequence scores
Consensus score2195 rrnAC1214 HVO_B0364 Hmu3420 VNG0830
1951rrnAC1214 2248 1853 1411 1708
1933HVO_B0364 1853 2223 1405 1675
1562Hmu3420 1411 1405 1865 1493
1891VNG0830 1708 1675 1493 2149

276 symbols
consensus       MTNYGLVIDQERCIGCQACAVTCKQENNVPMGQFWNRVLTEGGDHMDTPSGDYPEDGDDG
#oth            1111111111111111221222111111121..2......2...12...2.3...2.22.
rrnAC1214       :::::::::::::::::::::S::::::::::::::::::::::K::::::G:::::GS:
HVO_B0364       ::::::::::::::::H::::::::::::GL::Y::::::::::K::::A:T:::N:E::
Hmu3420         ------------------------------:::A::::::V::::I:::E:S::::::::
VNG0830         :::::::::::::::::S:SL:::::::::::::::::::Q::::V:::::::::G::G:

consensus       TLEMSYQPTACQHCENAPCVKVCPVNATYTRDDGIVEIDYDKCIGCRYCMAACPYNARVF
#oth            1.1.2.........1..............1.1...........1................
rrnAC1214       A:D:Q:::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_B0364       ::::::::::::::D::::::::::::::::E::::::::::::::::::::::::::::
Hmu3420         :::::::::::::::::::::::::::::K:E::::::::::::::::::::::::::::
VNG0830         ::::T::::::::::::::::::::::::::::::::::::::M::::::::::::::::

consensus       NWDEPQHRPEDGTGDVAARPQGVVEKCTFCSHRVEEGLDPACVVNCPADARIFGDLDDDE
#oth            .....212..1.....21................11.....................112
rrnAC1214       :::::D:M::E:::::::::::::::::::::::D:::::::::::::::::::::::EG
HVO_B0364       ::::::TV::::::::P::::::::::::::::::::::::::::::::::::::::NE:
Hmu3420         ::::::::::E:::::EE::::::::::::::::::::::::::::::::::::::::::
VNG0830         :::::E:::::::::::E:::::::::::::::::D:::::::::::::::::::::::D

consensus       STVSKYIAEYDTNRLLDDRGTDPKTYYIRGEMSPGRPQKSDKLESELDDVS-WS---DNA
#oth            ......121.2.31..1111.1.1.1..3........111111.....111211222233
rrnAC1214       :::::::N::E:D:::E::::N:::H::S:::::::::T:::M::::::::P::DGSEDV
HVO_B0364       :::::::RK:Q:T:::E:::::::::::::::::::::T:::M::::::::V::EPK::G
Hmu3420         ::::::V::::::::::EKD::::::::Q::::::::W:GKE::::::E--:--:::QPT
VNG0830         ::::::::::::HQ:::EK::::S::::N::::::::W::K::::::::--:--::::E:

consensus       PAEARESDGSGEGGSH-S---DAAPHVPADAAGGDD
#oth            1311322211232121212221231111.3331...
rrnAC1214       ::::G:::S::S::::H:IEG::::::::VGS::::
HVO_B0364       :V:--::G:::G::::G:LSN::L:::::FE-::::
Hmu3420         :E::DDP:SE------:-:::ESMRRAT:::VW:::
VNG0830         AKA::RRS::V:N:Y-:-::::VT:::::ET:::::