|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3808 | NP1796A | Hut0352 | rrnAC0166 | Hmu0730 | VNG0403 | HQ1715A | hla2537 | HVO_0870 | Hbo0668 |
3218 | NP1796A | 3771 | 2949 | 3073 | 3033 | 2691 | 2778 | 2847 | 2952 | 2922 |
3240 | Hut0352 | 2949 | 3787 | 3212 | 3231 | 2612 | 2713 | 2902 | 2877 | 2846 |
3306 | rrnAC0166 | 3073 | 3212 | 3827 | 3410 | 2673 | 2720 | 2976 | 2916 | 2909 |
3402 | Hmu0730 | 3033 | 3231 | 3410 | 3811 | 2747 | 2798 | 2996 | 3000 | 2963 |
3001 | VNG0403 | 2691 | 2612 | 2673 | 2747 | 3671 | 2557 | 2692 | 2725 | 2785 |
3037 | HQ1715A | 2778 | 2713 | 2720 | 2798 | 2557 | 3951 | 2926 | 2962 | 3057 |
3198 | hla2537 | 2847 | 2902 | 2976 | 2996 | 2692 | 2926 | 3844 | 3035 | 3099 |
3304 | HVO_0870 | 2952 | 2877 | 2916 | 3000 | 2725 | 2962 | 3035 | 3800 | 3368 |
3272 | Hbo0668 | 2922 | 2846 | 2909 | 2963 | 2785 | 3057 | 3099 | 3368 | 3785 |
527 symbols consensus -MSDEQELGITESKEHNTGEWYAEVVQKAGLADYAPMG--GFIVTRPRGYALWERIQNHL #oth 1234212111121142321111112111121121211.11........1.12..32143. NP1796A :-MTD::::::::::::P:::::::::::::::::::::::::::::::::::::L:D:: Hut0352 :::G::::::::::::A:::::::L::::::::::::::::::::::::::I:::LK::: rrnAC0166 :::G::::::::::::SP:::::::::::::::::::::::::::::::::I::::::N: Hmu0730 :::E::::::::::::SP:::::::::::::::::::::::::::::::::I::Q::T:: VNG0403 :-----------------------------------::::::::::::::::::A::DN: HQ1715A :::ED:D::::Q::I::::::::::::::E::N:G:E:MS::::::::A:G::::V:SY: hla2537 MSD:D:::::::::S:::::::::::::::::::G:E:MS::::::::A::V:::L:GF: HVO_0870 ::::::::::::::QY::::::::::::::::N:G:E:MS::::::::::::::S:::Y: Hbo0668 :::::::::::::::Y::::::::::::::::N:G:E:MS::::::::A::::::V:GF: consensus DGWFKDTGVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTHGGHDELEERLAVRPTSES #oth .23..3...1.1...1....2...1..11.1.........131.331.111......... NP1796A :::::E:::::T:::M::::::::::::::D::::::::::::::::::::::::::::: Hut0352 :::::Q:::::::::M::::::::K::::::::::::::::K::Y:::::Q::::::::: rrnAC0166 ::::::::::::::::::::::::K:::V::::::::::::::::N:::::::::::::: Hmu0730 :::::::::::::::M::::::::::::::::::::::::::::NE:::::::::::::: VNG0403 :::::::::E:::::M::::D::::::::::::::::::::Q::::D:DQ:::::::::: HQ1715A :TR::Q::::::::::::::G::::::E::::::::::::EQA:RN:::::::::::::: hla2537 :AK::::::::::::::::::::::::::::::::::::::EA:NK:::::::::::::: HVO_0870 ::E::K:::::::::::::::::::::::::::::::::::::::E:::::::::::::: Hbo0668 :AR::::::::::::::::::::::::::::::::::::::QA::::::::::::::::: consensus IIAPYLAQWVRSHRDLPLRVNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHATEEDAWE #oth ..1.1211.2..1....2.2...3............................31423.12 NP1796A ::T:FI:E::::Y:::::::::::::::::::::::::::::::::::::::::::S::D Hut0352 ::T:F::::T:::::::I::::::::::::::::::::::::::::::::::HD::::V: rrnAC0166 ::::FM:::T:::::::M:L:::::::::::::::::::::::::::::::::D:DG::: Hmu0730 ::::F::::T:::::::::I::::::::::::::::::::::::::::::::RD:D:::: VNG0403 ::::::S::::::::::::::::N::::::::::::::::::::::::::::::D:A::A HQ1715A ::::::S::I::Y::::::::::T::::::::::::::::::::::::::::::RA:::A hla2537 ::T::IS:::::::::::::::::::::::::::::::::::::::::::::::H:G::: HVO_0870 :::::M:::::::::::::::::A::::::::::::::::::::::::::::E:RDG::D Hbo0668 :::::MS::::::::::::::::A::::::::::::::::::::::::::::::A:A::D consensus ETMTRLDQYERLYEDVLAIPVLRGRKPEHDKFPGADTTTTVEALMPDGKSVQAGTSHYLG #oth .121..4..422..11111.214.2..2.......3..111.1......1..11...2.. NP1796A ::::::E:::::::E:M:::GMT:::::::::::::::::I::::::::::::::::::: Hut0352 :ME:::G::K::::::::M:::S::::D:::::::H::::::::::::::::G::::::: rrnAC0166 :::::::::A::::E:M:M:P:K::::P:::::::H::::I:T::::::T:::A:::::: Hmu0730 ::::::::::K:::::::M:P:K::::::::::::H::::::T::::::::::A:::::: VNG0403 ::TL:::::H:::::::G:::::::::D::::::::::MS::::::::::::G::::H:: HQ1715A :::L::N:::ST:::L::::::Q:A:::::::::::::::::::::::::::GA:::::: hla2537 :::::::::ASV:::L::M:::K:Q::D:::::::E:::::::::::::::::::::H:: HVO_0870 ::::::S::QS:::::::::::::A::::::::::::::::::::::::::::::::::: Hbo0668 ::::::::::SV:::L::::::::A::::::::::N::::::::::::::::GA:::D:: consensus TSFAEAFDITYTDEDEEERTAHTTSWGLSWRALGALIMTHSDDQGLVLPPTLAPEQVVIV #oth 11.11.1.211312..3343.1.........12...2.1...2....1.122.13...1. NP1796A :::::::::E::::::TKQ::::::::::::::::::::::::::::I::A:::T:::V: Hut0352 ::::::Y:V::V:::::VK:::::::::::::::::F::::::::::::::::ET::::: rrnAC0166 :::G:::::::A:A::::N:::::::::::::M:::::::::::::::::A:::D:::V: Hmu0730 :::::::::::V::::::E:::::::::::::M:::::::::::::::::::::K:::V: VNG0403 Q:::D:::::FA::::A::::Y::::::::::I:::V:S::::::::::::V::K::::: HQ1715A :E::D::::::::T::TS:V::::::::::::::::::::::N::::::::V:::::::: hla2537 Q:::::::::FS:::::::I::::::::::::::::::::::E:::::::GV::::::V: HVO_0870 ::::::::L:::T:::D:EP:::::::::::S:::::::::::::::::::I:::::::: Hbo0668 ::::::::L::::::::SQV:::::::::::::::::::::::::::::H:V:::::::: consensus PIWQEDTKDEVLEYAADVAAELDDAGVRVELDDRDERNPGFKFNEWELKGVPLRIEIGPN #oth ...1212214.33.1232232.12122..11.1.131.....1.11..3...1.3...13 NP1796A ::::A::EEA:K:::::L:::::EQ-F::::::::::::::::::H::Q::::::::::: Hut0352 :::D::S::D::A::E::E:D:E::::::::::::H::::::Y::H::N:::::::::SY rrnAC0166 ::::::N::::ID::::L:::::E:D::::::::EH::::::Y::H::H:::::V::::H Hmu0730 :::::::::::::::::::::::E:::::HF::::H::::::Y:D:::::::::V::::: VNG0403 :::::::::D:EQ:G:EI::::EAQ::::HF::::G::::::::::::N:::V:F::::: HQ1715A ::::TE::ER:::::E:::NN:::::I::::::::DQ:::::::::::::::::A::::D hla2537 :::::::::::::::EG::DD:::::I::::::::G:::::::::H::N::::::::::H HVO_0870 ::::A::QEK::D::K:I:ED:E:::::::::A:::::::::::::::::::V:F::::: Hbo0668 ::::A::QEK:::::ESISE::E:::I:::::::::::::::::::::::::V:F::::: consensus EVEDDEVTLVHRPDGESITEDREGIAETVQDHLDEVYAKLYAAAEETLEENIREADSRAE #oth .131232.22.....125233.352332.523112121...12.122.3221.2.45.41 NP1796A ::::EAA::::::::::DVAE::S:TDA:DEA:ET:::::::S::A:::::::K:HG:G: Hut0352 ::A:::L:::::::::E::VE:DNV::::E::::TIF:::::S::::::GE::::E::E: rrnAC0166 ::::G:A:::::::::TE:V::D:::D::T::::T:H:::::S::::::GE::::E::E: Hmu0730 ::::E:L::S::::::::::S:D:LET::R::::::F:::::S::::::GE::::T::E: VNG0403 ::::::::V::::::::TV:::AA::DR:H:::::::D:::D::ADR:A::V::::N::D HQ1715A :ATEGT:::I:::::::::AE:SE:V::::EQF:A:::::::::::::NS:::I:ET:S: hla2537 ::::G:L::::::::::VV:::::VVA:::::F:::::::::T:::::DGAV::::D::D HVO_0870 ::D::V::A::::::D:VEL:::N:::A::AQF:::::::::::::N::::V:::SE:N: Hbo0668 ::D::V::V:::::::TKEVA::D:::::REEF:::::::::::::N::::V:::::::D consensus ILGTIGQHGGYVKAPWCGDEACEEEIKDAIAAEIVMVPLDRDE--------------EPI #oth 1...1.......121....12..32..131......1.3431222111111111111324 NP1796A ::::L::::::::TG::::::::A::::E:::::::L:::E::::::::::::::::P:V Hut0352 :::::::::::::CG:::::::::P:::::::::::::K::::::::::::::::::::: rrnAC0166 :::::::::::::CG:::::D:::P::::::::::::::::::::::::::::::::::: Hmu0730 :::::::::::::CG:::::D:::P::E:::::::::::::::::::::::::::::::: VNG0403 :::::::::::::::::::QD::A::::Q::::::::::GE:SAARAASELEGERVP::D HQ1715A L::::::::::::T::::::G::TA:::E:::::::::ISS::::::::::::::::DDE hla2537 ::::L:::::::T:::::::::::P::EPM::::::::FED:DPL::::::::::::AEA HVO_0870 :::::::::::::::::::::::D:::EQ::::::::::NDED::::::::::::::AE: Hbo0668 ::::::::::::::::::::D::T::::Q::::::::::NDE:::::::::::::::AEV consensus HDGED------------------------CAICGDDAEETAYFAKSY #oth 32223111111111111111111111111.21.123.32......1. NP1796A Y:--T:::::::::::::::::::::::::GV:::E:T::::::::: Hut0352 ::--E::::::::::::::::::::::::::::::E:::::::::T: rrnAC0166 :E--::::::::::::::::::::::::::::::E:::::::::::: Hmu0730 :E--E:::::::::::::::::::::::::::::EN::::::::::: VNG0403 :::::::::::::::::::::::::::::::::::E:TR:::::::: HQ1715A Q:TT:ENMGVNNDTTVESNEKSLDLTDST:VV:DNP:FK:::::::: hla2537 DH::T::::::::::::::::::::::::::::D::::R:::::::: HVO_0870 ::::N::::::::::::::::::::::::::V::::::::::::::: Hbo0668 :::::::::::::::::::::::::::::::::::::D:::::::::