| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 6240 | VNG2526 | HQ2478A | rrnAC2227 | Hmu0436 | Hbo1666 | HVO_0627 | hla0291 |
| 4671 | VNG2526 | 7223 | 3928 | 4327 | 4148 | 4245 | 4042 | 4024 |
| 4589 | HQ2478A | 3928 | 6508 | 4094 | 3860 | 4327 | 4231 | 4085 |
| 5011 | rrnAC2227 | 4327 | 4094 | 6796 | 4965 | 4495 | 4336 | 4215 |
| 4841 | Hmu0436 | 4148 | 3860 | 4965 | 6922 | 4181 | 4144 | 4051 |
| 5091 | Hbo1666 | 4245 | 4327 | 4495 | 4181 | 6170 | 4539 | 4436 |
| 5139 | HVO_0627 | 4042 | 4231 | 4336 | 4144 | 4539 | 6783 | 5164 |
| 4923 | hla0291 | 4024 | 4085 | 4215 | 4051 | 4436 | 5164 | 6822 |
1092 symbols consensus MRDLLSLSDLRTQFSTDRGQVKAVDGIDLDVREGETVGLVGESGSGKSVTALSAMGLVDD #oth 1331.11.211.1.3.2..2.1...121.3142...1................1.311.1 VNG2526 :S:I::::N:::::D::::A::::::V:::ISD::::::::::::::::::::::Q:::: HQ2478A :SPI::::E:::::::E::::::::DVS:::HA::::::::::::::::::::::::I:: rrnAC2227 :::::T::::::::E::::T:::::::::T:::::::::::::::::::::::::DI::E Hmu0436 :::::T::N:Q:H:E:E::T:H:::::::S::A:::L::::::::::::::::::RI::E Hbo1666 -MT:::I:::::::A:::::::::::V::EID:::::::::::::::::::::T:::::: HVO_0627 ::N:::::::::::::G:::::::::L::T:G:::::::::::::::::::::::::::: hla0291 :PP::::::V::::::E::::::::::::EI::::::::::::::::::::::T:::::: consensus PGEIVGGEVTLTSARLADRLRRQYP----------------------------------- #oth ..4221.51323244313323331532221111111111111122331333311233222 VNG2526 ::DV:::G::I:DPDI:A:VLAAHADAAATYPFAVVSACRELAADLCGDDAVDAAPRELR HQ2478A ::QVI:::::IQ::S::EMF:D::T::::::::::::::::::::::::::::::::::: rrnAC2227 ::H:A::QIRFGALGTVT::S::::KAVRT::::::::::::ADEGSGFITIDAATVDRS Hmu0436 ::FLA::D:HFGAVETV:::A::::RGVAT:::::::::::::ADHDGYLHLDAVDLDRS Hbo1666 ::H::::::::::PE::TQ::EE:G::::::::::::::::::::::::::::::::::: HVO_0627 :::::S:S:E:E:G:::EEF:EE:N::::::::::::::::::::::::::::::::::: hla0291 :::::::T:E::D::V::E::DR:D::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 222232233322111113221322332313322333122222222222222222222222 VNG2526 GIAADLEADPGGIGPRLHEFADRIDASGPDDDTRAIGDELDAAVLDALDGFVFFTAATVD HQ2478A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2227 RLPASLETTADD:::::RTLAKQFIQEAPKKALPETGD:::::::::::::::::::::: Hmu0436 RLPDGVDRSLDD:::::DELARRFVRSEPATALGPVGSTGEHETDRGTTPSGTGSDSAQL Hbo1666 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0627 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0291 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --APSF---------------------VDGDYVDLTAAPEEALRDVRGGEMGMIFQDPMT #oth 2222421111111111111111111112212512.22...111.32..2121........ VNG2526 TDD:DVDASADPLDVLRDRPDGAAHVRLTDAR::::::::R:M::L:::::::::::::: HQ2478A ::DL:::::::::::::::::::::::::::QIL::E:::::::S:::A::S:::::::: rrnAC2227 ::::VT:::::::::::::::::::::ITDG:::::::::RVM::I:::D:::::::::: Hmu0436 RT::VT:::::::::::::::::::::IRDG::::R::::RV:::::::D:::::::::: Hbo1666 :::::::::::::::::::::::::::::::EI:::::::::::S::::::S:::::::: HVO_0627 ::N:A::::::::::::::::::::::::::V:N:VD:::::::A:::R:L::::::::: hla0291 :::AE::::::::::::::::::::::::::TI:::::::::::F:::R:IS:::::::: consensus SLNPALTVGEQVAESLRLHQYGGRRKDSWFNAVREILPRI--GRDVDEEVVERTIEVLEE #oth ....12.1.1.11...2..11.4223.1.3.12.14224221243513311222221.23 VNG2526 ::::S::::::::::::::R::EQPT:::L:GL:AAIS--::RG:T::Q::ADVVD::DA HQ2478A :::::::I::::::::K:::F:N:K::T:I::I::M:T::::RSNP:NA::::::D::SQ rrnAC2227 :::::I:::::::::::::R::SK:N::::::::::T:S:SR:SEM:::IRSDV:SL::: Hmu0436 :::::::::Q:I::::L::R::RQ:S:::V::L:::::VVG::NA:TGR:R:DVL:L:DA Hbo1666 ::::::::::::S:::::::::::K::T:L:::::V::K:G::QEL::Q::::AV:::S: HVO_0627 ::::S::::::::::::::::::::::::::::::L::::::S::I:D:I:::::::::S hla0291 ::::SV::::::::::K:::::::::::::::::::::K:::S::::D::R:E::::::: consensus VGIPEPAARIDEYPHEFSGGMRQRVLIAIALACRPKLLIADEPTTALDVTIQAQILDLID #oth ...1..33.21.1.1..................1.32.1.................11.2 VNG2526 ::::::ET:L:::::::::::::::::::::::::R:::::::::::::::::::::R:S HQ2478A :::S:::S:::::::::::::::::::::::::Q:NI:::::::::::::::::::E::N rrnAC2227 :::::::D:VN:::::::::::::::::::::::::::V::::::::::::::::::::: Hmu0436 ::::::TT::::::Y::::::::::::::::::::::::::::::::::::::::::::: Hbo1666 ::::::TS:V:::::::::::::::::::::::::::::::::::::::::::::::::N HVO_0627 ::::::G::V::F::::::::::::::::::::Q:RV:V::::::::::::::::::::: hla0291 ::::::G::::::::::::::::::::::::::Q:G::V::::::::::::::::::::: consensus DLQADLGMSVLFITHDLGVVAETCDRVAVMYAGEIVEEGPVEEIFHNPSHPYTYTLLESI #oth 1..211..2..1.....................1.......1...4........1.1..1 VNG2526 :::DEF::::::::::::::::::::::::::::::::::::::::::::::::A::::: HQ2478A E:::::::G::::::::::::::::::::::::K:::::::::::T::::::::A::::: rrnAC2227 :::::::::::::::::::::::::::::::::::::::::::::Q:::::::::::::: Hmu0436 ::::E:::A::::::::::::::::::::::::::::::::G:::::::::::::::::: Hbo1666 E::D:::::::M:::::::::::::::::::::::::::::::::A::::::::A::::: HVO_0627 :::E:::::::M::::::::::::::::::::::::::::::::::::::::::::I::L hla0291 :::::::::::M:::::::::::::::::::::::::::::::::G:::::::::::::L consensus PREDKERLTPIEGNVPDLIDMPEGCHFAPRCPWATDECRSGEIPYLQHGPDDVDHRSKCI #oth .32331..1..2.1..1...1.2..1.12.....322.2511.1131..222.3..1..1 VNG2526 ::D:AD::H:::::::::::L:S::::EA:::::S:A:VGDD:::ME::::::S:::::V HQ2478A :TANRD:::::D:::::::::::::N::::::::EPA::H:D:ASR::::A:::::A::: rrnAC2227 :G:GT:::::::::::S:::::S:::::D:::::EP:::E::::S::::::::T:::::: Hmu0436 ::A:T::::::G:S::S:::::::::::::::::::D::R::::::::::EG:::::::: Hbo1666 :T::::::::::::::::::::T::N::A::::::::::Q:D:::::::::G:E::A::: HVO_0627 :S::::::::::::::::::::::::::::::::QP::T::::::K:::D:E:::::::V hla0291 :S:E::::::::::::::::::S::::::::::::E::T::::::::::AE::::::::: consensus LESFDTDEYGGDADGVAATDTSRGD-PLLEVDGLKKHFSRADGLLDRYLGADDESVKAVD #oth 412.1322..4115323444444323312232.13.112121241.342132333.1... VNG2526 E::::::A::V:DGA:T:ASA:FDGE:::SSR::E::::::::W::SM::G:Q:P::::: HQ2478A :DE:NE::::T:::LT:E:TMQTS:::I::::::Q:::LQSESP::E::EL:T:R::::: rrnAC2227 H:::::S:::TGDT:::::E:T:T:RQ:M:::::::::::::D:::K:I:REP::::::: Hmu0436 F::::A:A::::::::::SE:T:T:RT:V:I::::::::::ED:F:K:::RVPDA:R::: Hbo1666 M:E:::SV::S:DAL-EKG:SDI:E:E::RAE:::::::::E::::EW::LE:A:::::: HVO_0627 :DD:::S::::::IE-:S:G:EPS:T:::::::MQ:YYEQ:::I:::FF::::R:::::: hla0291 M::::KN:::D::V:-PGR:R:I:E:::V:I:::R:YYEQT:SV:::V:::::R:::::: consensus GVDLDVYEGETLGLVGESGCGKSTTGRSILRLLEPTDGRVVFAGDDLTELDGDELRAKRR #oth .1122112...1............1.221.2.331.2.2.1.2.3.122.3323..35.3 VNG2526 ::::::::::::::::::::::::::::::::V:::::::::::::V:D:ND:::::T:T HQ2478A ::::T::K:::V::::::::::::::Q:::Q:I:::::::::::::::D:SKS:::KR:C rrnAC2227 ::SM:I:::::::::::::::::::::T::::::::::K:::::Q::S:::KSG::EV:: Hmu0436 ::S::::::::::::::::::::::::T::::::::::T:L::::::AG::S:A::G::: Hbo1666 ::::S:::::::::::::::::::::ET::Q::DA:E:::::Q:E:::::G:TD::K::: HVO_0627 :::FT:::::::::::::::::::A:::L:H:TP::G:::::S:T::SG::S:::::M:: hla0291 :I:FTINR::::::::::::::::A::AL:H:TK::::::::::T:::::::SA::EQ:K consensus DLQMIFQDPMSSLDPRMTVGQTIAEPLQIHDLPADDP-------------DRSR------ #oth 11.......1......121212.4...31....243321221121112123433121122 VNG2526 :M:::::::L::::::QSI:D::L::::::::::NPG:::::::::::::AQ:T:::::: HQ2478A :::::::::::::::::R:E:I:::::::::::::T-:::::::::::::NS:N:::::: rrnAC2227 :::::::::::::::::::::::M:::K:::::E:TG::::::::::::::G:::::::: Hmu0436 :M:::::::L:::::::::R:::T:::::::::DA:D:::::::::::::E::K:::::: Hbo1666 :::::::::::::::::::::I::::::::::::EE::::::::::::GE:QN::::::: HVO_0627 :M:::::::::::::::::::A:R:::DV::::ES::NVRGEADVTVTGI:AE:VSVTAS hla0291 N::::::::L::::::Q::::::R:::S:::::ES::SVATEAEVTVSGIA:D:VGVTVD consensus ------------------------------------------------------------ #oth 111112111221111121211111111112121212212211112222122121212211 VNG2526 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2478A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2227 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0436 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1666 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0627 DEIDAIVGSSNGVATAAVTVTVADGEVDVAVEERLRTEVEVER:EGDVVSGVTVRVTPGD hla0291 DEIDAVVGSGSGVATAHVDVTVADGEVDVDVREHLGVEGTVERTDAGDVERVSVTVSAGD consensus --REQRRRRVRELLDAVGLDPGQYDRYPHELSGGQRQRVGIARALAVDPDFIVADEPVSA #oth 22233.23..52.24....113.21.....1.............1....1..11...... VNG2526 :::QA::D::ID:M:::::::S:::::::::::::::::::::::::::::::::::::: HQ2478A ::QTT:KQ::T:::N::::::D:R::::::::::::::::::::I::::E::IC:::::: rrnAC2227 ::::::VE::AD:ME::::::D:::::::::::::::::::::::::::::::C:::::: Hmu0436 :::Q:::E::E::VA:::::VA:L:::::::::::::::::::::::::::::C:::::: Hbo1666 :::::::D::V::MR::::E:::RT:::::M::::::::::::::::::::::::::::: HVO_0627 STS:R::::::Q:::::::E:::::::::::::::::::::::::::::::::::::::: hla0291 TD:LR::::::Q::E::::EV::::::::::::::::::::::::::::E:::::::::: consensus LDVSVQAQILNLLEDLQDEFGLTYLFIAHDLSVVRHICDRIAVMYLGEIVEVAATDDLFA #oth .........1..11...41.1..1.............1..1......11..2.3.34..3 VNG2526 ::::::::::::::::::::D::::::::::::::::::::::::::K:::T:Q:AQ::S HQ2478A :::::::::::::K:::S:::::F:::::::::::::::::::::::::::I:P:ET::T rrnAC2227 :::::::::I:::::::H::::::::::::::::::::::V:::::::V::::D:P:::: Hmu0436 :::::::::I:::::::G:::::::::::::::::::::::::::::::::::D:PA::D Hbo1666 :::::::::::::::::::::::::::::::::::::::::::::::::::T:::::::: HVO_0627 :::::::::::::::::ER::::::::::::::::::S::V:::::::::::::::E::D hla0291 ::::::::::::M:::::R:D::::::::::::::::S::V:::::::::::::::E::: consensus DPKHPYTKALLSAIPEPDPTAETD-RIILEGDVPSPIDPPSGCHFRTRCPSVIPPADIDI #oth 2.2....21.1.1..31..3132.1.11.2.......1.....1.1....2....4.21. VNG2526 T:::::::S:::S::D:::L:T::D::::::::::::::::::R:::::::::::::L:: HQ2478A T:Q::::R:::::::V:::::H::::V::D::::::::::::::::::::E::::D:VE: rrnAC2227 :::::::R::M:::::::::V:A::::L:K::::::::::::::::::::E::::-:::: Hmu0436 ::::::::S::::::VA::D:DS:::V::K:::::::::::::R:H:::::::::E::E: Hbo1666 E::::::Q::::::::::::::::::::::::::::::::::::::::::Q::::T::E: HVO_0627 ::R::::Q:::::::::::A::::D::::::::::::N::::::::::::Q::::::L:: hla0291 ::Q::::::::::::A::::VD::D:V::::::::::::::::::::::::::::::L:: consensus EQATYREVMDLRQRVEREAIDVDAVRE-AAAAGDPDA-AA-VAADGGRAAEA-------- #oth 2.311.21.22.11.3333122212323244234534222134311.3345411222122 VNG2526 ::DAF:A:::F:ES:ADRD:PL:::WAD::::SS::GA::G:PS::::::DR:::::::: HQ2478A D:S:::DI:T::E::SNA::::::IQ::---------:--:---ET:VTD:D:::::::: rrnAC2227 ::E:::::::Y:::::D:::SI::::::--Q:::A:S::T:A:T:::ANLTEQPSGRGQV Hmu0436 ::::F:::::Y:::::N:R::L::AWD:-::::ETS::--:TV:::::PH:R:::::::A Hbo1666 :::A::::::::::::S:N:::A::::EVS:S:GKAE:T::A:T:::VP:N::::::::: HVO_0627 :::A:::::::::::::::L::ETA:DA:LD::::S:E::::S::::T:D--:::::::: hla0291 K:E::::::NY::::D:Q::::ETIL:A:DESPGQ--:--:::::::T:SA:::PSGGDA consensus ---AFVDALRDRLFEHPLSGENRRVVATALEALAAADWDEAADILRDRFESVCERQAPEL #oth 333233422423523441422212..33124422431113.333.421.1.1..243.31 VNG2526 ::A::::::W::E:DTEP::DA:E:::::FD:::R::::A:E:A:AAT:::P:::TE:G: HQ2478A ::::LI:T:SK:YINN::::::::::N:::K:VVNG:FET:TTR:HE::A::::Q:S:AF rrnAC2227 PMS::KQTMF::F::TD:A:::::::E:SI:H::DE:::A::SV:Q::::::::T:H::: Hmu0436 SRS::KS::FED:::::PT:R::E:::ESF:H::TE:::G:ETV:::::::::::SH::: Hbo1666 :::-VAAE:Y:::::E::QD::::::ES::NSI:::E:::::S::::::::::::S::T: HVO_0627 ::::V::E::ESHLS:S::P:L:G::DR:::RVV:D:::::GE:::E::::::::D:::: hla0291 IPPGA:E:V::VQ:DQYPD:RAGE::DRS:RLVI:GE:E::::::EET:A:::::EE:T: consensus G---------------DDAHPAACHLYDD------------------------------- #oth 51111111111111113441121..12144332331111111111111111111111111 VNG2526 S:::::::::::::::G:QQ:V:::::::AGSA::::::::::::::::::::::::::: HQ2478A ETSKESVSSSSGISTAEE:::T:::R:::DMNAEPLEVIDTDIDTDTDTDANANTNTDTN rrnAC2227 Q:::::::::::::::P:S:::::::::QNDSDST::::::::::::::::::::::::: Hmu0436 :::::::::::::::::R::::::::VENGDIDRS::::::::::::::::::::::::: Hbo1666 D:::::::::::::::G:T:ATS:::::-::::::::::::::::::::::::::::::: HVO_0627 ::::::::::::::::EQT:::::::V:E::::::::::::::::::::::::::::::: hla0291 P::::::::::::::::GD:::::::I:-::::::::::::::::::::::::::::::: consensus ------------ #oth 111111111111 VNG2526 :::::::::::: HQ2478A TTYADVRRSNTD rrnAC2227 :::::::::::: Hmu0436 :::::::::::: Hbo1666 :::::::::::: HVO_0627 :::::::::::: hla0291 ::::::::::::