|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2320 | VNG1053 | hla2607 | NP3366A | NP4658A | HQ2694A | HVO_1517 | Hbo0036 | Hut1224 | rrnAC0419 | Hmu1371 |
1561 | VNG1053 | 2264 | 1274 | 1365 | 1364 | 1219 | 1358 | 1279 | 1372 | 1388 | 1398 |
1563 | hla2607 | 1274 | 2318 | 1332 | 1351 | 1414 | 1451 | 1381 | 1362 | 1459 | 1346 |
1828 | NP3366A | 1365 | 1332 | 2342 | 2284 | 1359 | 1408 | 1402 | 1470 | 1542 | 1546 |
1838 | NP4658A | 1364 | 1351 | 2284 | 2337 | 1367 | 1410 | 1411 | 1486 | 1543 | 1535 |
1677 | HQ2694A | 1219 | 1414 | 1359 | 1367 | 2985 | 1560 | 1581 | 1404 | 1419 | 1425 |
1738 | HVO_1517 | 1358 | 1451 | 1408 | 1410 | 1560 | 2284 | 1701 | 1468 | 1545 | 1529 |
1742 | Hbo0036 | 1279 | 1381 | 1402 | 1411 | 1581 | 1701 | 2617 | 1483 | 1468 | 1521 |
1720 | Hut1224 | 1372 | 1362 | 1470 | 1486 | 1404 | 1468 | 1483 | 2351 | 1552 | 1626 |
1792 | rrnAC0419 | 1388 | 1459 | 1542 | 1543 | 1419 | 1545 | 1468 | 1552 | 2603 | 1766 |
1822 | Hmu1371 | 1398 | 1346 | 1546 | 1535 | 1425 | 1529 | 1521 | 1626 | 1766 | 2541 |
405 symbols consensus --MADRDDVCVLLPTYNEAETIGDVVDGFREEGFENVLVIDGGSTDGTREIAAEHGARVV #oth 12253322.12.3..41.211124.1432554.2331..1..2.3.2.334.232..2.1 VNG1053 :MSEEYEE::A:V::R:::A::A::I::LF:V:VGH:::V::N:A:D:AAV::::::E:: hla2607 :::SEY:::::::::MD:V::VAR::EA::NA:LDG::::::::::::Q:A:R:A::::: NP3366A MR:P::T::::::::L::S:::::::G::YDH:::H:::V::D::::::A::R::::::I NP4658A MR:P::T::::::::LD::::::::IE::H:::::H:::V::D::::::A::R::::::I HQ2694A ::::SF:::T::V::::::::V:Q:::D:Q:A::DDI:::::D:::::QRV::N:::::: HVO_1517 :::PTP:A::I:T:::::::::A::ISDY:D:::A:::::::::::::::L:EDA::H:: Hbo0036 ::-M:Y::::I:I::::::::::G::SDYHS:::::I:::::::D:E:VD::EDR::::: Hut1224 :::HT:::::::I::::::AA::::I:::QA::L::::::::::R:D:Q::::::::::: rrnAC0419 ::::::::::I::::F::::::ES::S::::Q::D:I:::::::::::QDR:ESA::::: Hmu1371 ::::::::::::V::::::A::::::AS:VGQ:::H::::::::D:::::L:::A::::: consensus EQS----GSGKGQAVREAVE-HIDAPYVLMLDGDGTYRPDDADRMLEPLFAGRAEHVIGD #oth 4..1111.3.....1..124331222..112.1.2.152521341.2..43.513..1.1 VNG1053 Q:::::::D::::::::G:S:L:E:A:::L::::::NP:AQ:S:L:D::V::E::::V:: hla2607 ::::::::R::::::::::RD:::::::V:A:A:A::DAG:V:A::D::LS:E:V::::N NP3366A T::::::::::::::::G:::Q::Q:::::A::::::::E:::K::T::::::::::::: NP4658A T::::::::::::::::G:::Q::Q:::::A::::::::E:::K::T::::::::::::: HQ2694A T:::::::T:::::::::::RY::RT::::::::A::HT:::EG::::::D:S:A::V:: HVO_1517 V:::::::::::::::::::D::Q:::::::::::::EAT::TK::D::TE:Y-D::::: Hbo0036 M:::::::::::::I:::::Y::E::::::::::A::CAK:::T:::::DE:Y-:::::: Hut1224 ::::::::::::::::::F::Y::::::::V::::::::A:::AL::::LS:D:D::::N rrnAC0419 :::::::::::::::::::TR::EQ:::::A:::E:::::E:::L::::LS:Q:D::::N Hmu1371 :::GTGR:::::::::::LNR:VEQ:::::::::A:::::E:::L:::::D::::::V:N consensus RFADMRPGAMTRLNQVGNRIINRAFATIHGRDLRDILSGYRAFTRESFRRMTLTADGFGI #oth .1..124...131.22..211.33.451..4235.1......1.33.25336.113.... VNG1053 :T::::::::ST:::I:::L:::::HR:::E:YG::::::::::A:::D::F:S:E:::: hla2607 :::::::::::Q::RI:::L::LS:RA:::EQY:::::::::::::::::LH:::::::: NP3366A :::::EA:::::::A::::L:::L:::::::::Q::::::::::TQ::E:SK:S:::::: NP4658A :::::EA:::::::A::::L:::L:::::::::Q::::::::::TQ::E:SQ:S:::::: HQ2694A ::::L:E:::::F:::::S::::G:RAV::DQI::V:::::::::A:::E:::::::::: HVO_1517 ::::::::::::::R:::::::::::F:::Q:F:::::::::::::::LD::::S::::: Hbo0036 :::::HD:::::F::L::::V:::::::::H:FE:::::::::::D::G::::::::::: Hut1224 :::::ES:::::::R::::L::::::G::::NFV::::::::M::D:IE:FD::SA:::: rrnAC0419 :::::::::::K::::::::::S::E:::::::T:::::::::::Q::Q:SS:::S:::: Hmu1371 :::::EA:::::::::::G:::T::SV::::::T::::::::::L::V:QFD:::::::: consensus ETEMAVECVKRNISTAVVPITYRARPDGSETNLRPIRDGGRIFLTLYRLAKTNNPLFYFG #oth ...11...21332413...11.33..3212...2.32..13.2.1.124.111..1.... VNG1053 ::::::::SRH::T:R:::T:::::::D:::::H::S::A::I::::S::::S::::::: hla2607 ::::::::::NRQ:V::::::::E::G::A:::H::::::V:::E:::K::::::::::: NP3366A :::L:::::R:GV:::::::R:E:::G::::::H:LK:::::L:::::::RM:::I:::: NP4658A :::L:::::R:GV:::::::R:E:::G::::::H:LK:::::L:::::::RM:::I:::: HQ2694A ::::::::AR:D:P::::::::YP::S::D:::::V::::I:::E:F:Q::::::::::: HVO_1517 ::::::::A::G:K:T:::T::YP:::::D:::D::::::I:::E:::R::::::::::: Hbo0036 ::::S::::::::E:T:::::::P::S::D::::::::::I:::E:::R::::::::::: Hut1224 :::LS:::::H::T:E::::R:ES::EDT::::::F:::AV:L:::::M::::::::::: rrnAC0419 ::::::::::H:::::::::::QP:::E:D:::::F:::AT:I::::QM::::::::::: Hmu1371 ::::::::::QGV::T::::::Q::::D:::::D:FS::AV:I:::::M::::::::::: consensus SVGAASTAVGVALAAYVAYEWLTVGVSHEVIALVAAAGILFGVQLLMFGVLSDLIVSLHR #oth .21542345.433241.3221324321..11.22244332111...2..2.1.2123211 VNG1053 :I::GFGTL:::::G::::D::LH:::::::::::GVSV::::::::::L::::::T::: hla2607 :L::I::SA:ALMTG::L:D:IVN:IP::I::IG:VGAATL:I:::I::F:A:M:L:::: NP3366A ::A:VG::G::::G:F:G:RY::A::::::L::L::FLV:LS:::::::::::I:::I:: NP4658A ::A:VG::G::::G:F:G:RY::A::::::L::L::FLV:LS:::::::::::I:::I:: HQ2694A ::::L::LT:LGV:V::IV::I::R:P::IL:V:::::V::::::::::::A:::Y:::S HVO_1517 :::F::::T:LG::L::::::VVRSI::::::V:SM:::::::::::::::::::L:::: Hbo0036 :::GL:::I:IGI:L:::I::V::NT::::L:V::::A:::::::::::::::::L:::: Hut1224 :::T::LL::AL:GV:::V::F:RNI::::::::::V::I::::::V::::::M::K::: rrnAC0419 :::LG::V::FL:G:::::D:VVNSI::::::V:GSFA::L:I::::::::::ML:AVN: Hmu1371 :::V::AL:::V::I::::::FV:::::::::::::S:L:::I::::::::::M::A:N: consensus EQTRRL---------------------------------------------------DDI #oth 114412111111111111111111111111111111111111111111111111111234 VNG1053 :::::I:::::::::::::::::::::::::::::::::::::::::::::::::::ERL hla2607 ::VA:Y:::::::::::::::::::::::::::::::::::::::::::::::::::ERA NP3366A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4658A ::S::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2694A :TMS:IGSVVEMDRTEQTVGGISRERDIDTDRKPDAHGSTIQPSHTDANDTLGSTTSS:V HVO_1517 ::MK:I:::::::::::::::::::::::::::::::::::::::::::::::::::EEL Hbo0036 DTL:KI::::::::::::::::::::::::::::::::::::::::::::::::::::EE Hut1224 ::MH::::::::::::::::::::::::::::::::::::::::::::::::::::::QV rrnAC0419 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::E:: Hmu1371 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::SE: consensus ADQLADQ-D------------------------------------ #oth 665566555534434433424343234433343343333323213 VNG1053 NK-----:-:::::::::::::::::::::::::::::::::::: hla2607 V:DGS:R:-:::::::::::::::::::::::::::::::::::: NP3366A ::::EE:N:E::::::::::::::::::::::::::::::::::: NP4658A ::::EE:N:E::::::::::::::::::::::::::::::::::: HQ2694A SEED:TNKKATIPTELDKTQHEDSVVTKEDIDTEDGSTQTHGSDS HVO_1517 E------:-:::::::::::::::::::::::::::::::::::: Hbo0036 TGTN:::TPDSGSNSNSGSTRPRGVRQDGGDEAETTDRSASNPDD Hut1224 L:ADRKTE:GSRD:::::::::::::::::::::::::::::::: rrnAC0419 :V::THESHSQPADVFDDQQVSGAEGIEDSDTETEPAVSPHQSDE Hmu1371 :R:VGNESTA::ADAVGDGTEPSAEGESDGERASSTSRP::::::