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[L] (RecA) COG0468 RecA/RadA recombinase
9 genomes BUD0248 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2473

rrnAC2910

HVO_0104

Hbo1389

Hmu2684

Hut1974

hla0664

NP0878A

HQ3429A

Pairwise sequence scores
Consensus score2569 hla0664 HVO_0104 HQ3429A Hbo1389 Hut1974 Hmu2684 rrnAC2910 VNG2473 NP0878A
2279hla0664 2567 2179 2204 2195 2027 2027 2026 2040 2029
2230HVO_0104 2179 2570 2174 2260 1983 1984 1952 2062 2040
2243HQ3429A 2204 2174 2571 2271 1997 2005 1943 2042 1993
2320Hbo1389 2195 2260 2271 2576 2047 2048 2041 2072 2062
2202Hut1974 2027 1983 1997 2047 2590 2300 2323 1937 2008
2227Hmu2684 2027 1984 2005 2048 2300 2584 2341 2010 2033
2209rrnAC2910 2026 1952 1943 2041 2323 2341 2585 1974 2006
2204VNG2473 2040 2062 2042 2072 1937 2010 1974 2896 2153
2142NP0878A 2029 2040 1993 2062 2008 2033 2006 2153 2591

391 symbols
consensus       -------------------------------------------MPEDDLEELPGVGPATA
#oth            111111111111111111111111111111111111111123322231..2........1
hla0664         :::::::::::::::::::::::::::::::::::::::::::::::E::D:::::::::
HVO_0104        ::::::::::::::::::::::::::::::::::::::::::::A:::::S:::::::::
HQ3429A         :::::::::::::::::::::::::::::::::::::::::::::::E::D::::::::S
Hbo1389         ::::::::::::::::::::::::::::::::::::::::::::::::::S:::::::::
Hut1974         ::::::::::::::::::::::::::::::::::::::::::MAATE:::D:::::::::
Hmu2684         ::::::::::::::::::::::::::::::::::::::::::MSTSE:::::::::::::
rrnAC2910       ::::::::::::::::::::::::::::::::::::::::MSMSASE:::::::::::::
VNG2473         MGRDSARRLLSTPSRRRPSAATSFTFSVLYTRLYAWGGTTRRY:::S:::::::::::::
NP0878A         :::::::::::::::::::::::::::::::::::::::::MAATTA:::::::::::::

consensus       DKLVDNGFDSYQSIAVASPGELSNTADIGESSAADIIQAAREAADIGGFETGATVLERRE
#oth            1..412.1121.21...112.1..1..1.1.212.1.1...1...1....1.14..2..1
hla0664         ::::E:::E::::::::::::M:::::::::::S:::N:::D:::V::::::::::::::
HVO_0104        ::::ES:Y::::::::::::::::K::::S:T:S:::N:::D:::V::::::SM:::::Q
HQ3429A         :::::A::E:::A::::::A:M:::::V:::T:S:::N:::D:::V:::::::A::Q:::
Hbo1389         :::T:A::E:::A::::::S:::::::V:::TSS:::N::::::::::::::SA::::::
Hut1974         E::TE::Y::::G::::::::::::::V::::::::::::::::::::::S::E::::::
Hmu2684         E::K:::::G::G:::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2910       E::E:::Y::::G:::::::::::::::::::::::::::::::::::::::S:::::::
VNG2473         E::R:::::AF::L:::NSA:::::::::::T:::V:::::::::V::::::::::::::
NP0878A         :::RE::Y:::::::::::A:::::::::::N:N:::::::::::::::::::D::D:::

consensus       QIGKLSWGIDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSA
#oth            1....2.513.1.11....2............11....1...21.1....3.3...3.32
hla0664         E::::::Q:::::::::::I::::::::::::AS::::::::M:::::::::::::D:GC
HVO_0104        :::::::Q:::::E:::::L::::::::::::::::::I:::::::::::P:Q:::G:GC
HQ3429A         E::::::K:P:::E:::::I::::::::::::::::::::::M:::::::P:::::G:A:
Hbo1389         :::::::::S:::::::::L::::::::::::::::::::::M:::::::P:::::G::C
Hut1974         :::::T::VE:::E:::::::::::::::::::::::::::::::::::::::::::::S
Hmu2684         :::::T:SVS:::::::::I::::::::::::::::::::::IS:T::::::::::::::
rrnAC2910       ::::::::V:::::::::::::::::::::::::::::::::::::::::::::::::::
VNG2473         :::::T:N:P::::::::::::::::::::::::::::::::::::::::T:Y:::H:R:
NP0878A         :::::E:L:P:I:EM:::::::::::::::::::::::::::::::::::E:A:::H:RC

consensus       IFVDSEDTFRPERIDDMVRGLDDEVLADTMELREI-----EGDPDDEETMEELVDSFLDK
#oth            1.1...........12.12..411313131241122112211334.123332.2422.12
hla0664         :::::::::::::::::::::::DI:::E::R::::::::::T:N:::A::::IAA:::Q
HVO_0104        ::I::::::::::::::::::E::A:EA:LDD::M:::::::SI:::::IKA:::D::::
HQ3429A         :::::::::::::::::L::::::IIT:LL:R::::::::::T:G:D:::KA:L:::::H
Hbo1389         ::::::::::::::::::::::::IIQA::DE::::::::::S::::AA::::LND::::
Hut1974         ::I:::::::::::EQ::E::E:D:I::::V:HGVAEE:G:A::A:DDHFDD:IE:I:::
Hmu2684         :::::::::::::::Q:::::::D::E:::V:HG:VEEAGDA:AG:::LL:A::E:V:::
rrnAC2910       ::::::::::::::EQ::K::A::::::::V:HG:VEEEADA::T::ALLDD::A:V:E:
VNG2473         V:I::::::::::::::::::S::T:QAA::AH:::::::::ST:::D:LT::::A::::
NP0878A         V::::::::::::::E:::::PED:IEAAL:E::::::::D:N:::::::::::Q:::::

consensus       IHVAKAFNSNHQILLAEKAKELASEHEDDEFPVRLLCVDSLTAHFRAEYVGRGELADRQQ
#oth            .....1......1......1.1.31411422.1.212................2..1...
hla0664         :::::::::::::::::::::::G:L:ES:W:I:IV::::::::::::::::::::::::
HVO_0104        :::::::::::::::::::::::G::::T:W:::::::::::::::::::::::::E:::
HQ3429A         :::::::::::::::::::::::RDNQ:SG:::::::::::::::::::::::S::E:::
Hbo1389         :::::::::::::::::::::::RD::E:::::::::::::::::::::::::Q::E:::
Hut1974         :::::::::::::::::::Q:::::GQ:E:::::::::::::::::::::::::::::::
Hmu2684         :::::::::::::::::::Q:I:::SQ::D::::::::::::::::::::::::::::::
rrnAC2910       :::::::::::::::::::Q:I:::SQEE:::::::A:::::::::::::::::::::::
VNG2473         :::::G::::::M::::::::I::::::GDW:::M:T:::::::::::::::::::::::
NP0878A         :::::::::::::::::::Q:I:A:::EGDY:::::::::::::::::::::::::::::

consensus       KLNKHLHDLMRVGDLYNTAVLVTNQVASNPDSFFGDPTQPIGGNILGHTSTFRMYLRKSK
#oth            ........1211.1.2.1121.....21...11.....11........2....2..1...
hla0664         :::::::::::I:::F:::I::::::::::::Y::::::A::::::::A:::::::::::
HVO_0104        :::::::::::I:::F::GI::::::S:::::Y::::::::::::::::::::I::::::
HQ3429A         :::::::::::I::::::::::::::::::::Y:::::::::::::::::::::::::::
Hbo1389         :::::::::::I::::::::::::::::::::Y::::::::::::::::::::I::::::
Hut1974         :::::::::::::::N::::V::::::A:::::::::::::::::::::::::L::::::
Hmu2684         :::::::::::::::N::::V::::::A:::::::::::::::::::::::::I::::::
rrnAC2910       :::::::::::::::N::::V:::::::::::::::::::::::::::::::::::::::
VNG2473         :::::::::EK::N:::A::::::::Q::::A::::::K:::::::::K:::::::::::
NP0878A         ::::::::ID:::N:::A:TV:::::Q::::A::::::K:::::::::K:::::::K:::

consensus       GDKRIVRLVDAPNLADGEAVMRVQDGGLKPE
#oth            11....1.......1...11...233..23.
hla0664         :N::::::::::::::::::::::GE:::::
HVO_0104        :::::::::::::::::::I:::::A:::::
HQ3429A         N::::::::::::::::::::::K:A:::::
Hbo1389         ::::::::::::::::::GI:::::::::::
Hut1974         ::::::::::::::P:::G::::EG:::MA:
Hmu2684         :N::::K:::::::P::::::::EE:::MD:
rrnAC2910       :N::::K:::::::P:::G::::EED::LN:
VNG2473         N:::::K::::::::::::::::::E:::::
NP0878A         ::::::K:::::::P::::::::END:::::