|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2569 | hla0664 | HVO_0104 | HQ3429A | Hbo1389 | Hut1974 | Hmu2684 | rrnAC2910 | VNG2473 | NP0878A |
2279 | hla0664 | 2567 | 2179 | 2204 | 2195 | 2027 | 2027 | 2026 | 2040 | 2029 |
2230 | HVO_0104 | 2179 | 2570 | 2174 | 2260 | 1983 | 1984 | 1952 | 2062 | 2040 |
2243 | HQ3429A | 2204 | 2174 | 2571 | 2271 | 1997 | 2005 | 1943 | 2042 | 1993 |
2320 | Hbo1389 | 2195 | 2260 | 2271 | 2576 | 2047 | 2048 | 2041 | 2072 | 2062 |
2202 | Hut1974 | 2027 | 1983 | 1997 | 2047 | 2590 | 2300 | 2323 | 1937 | 2008 |
2227 | Hmu2684 | 2027 | 1984 | 2005 | 2048 | 2300 | 2584 | 2341 | 2010 | 2033 |
2209 | rrnAC2910 | 2026 | 1952 | 1943 | 2041 | 2323 | 2341 | 2585 | 1974 | 2006 |
2204 | VNG2473 | 2040 | 2062 | 2042 | 2072 | 1937 | 2010 | 1974 | 2896 | 2153 |
2142 | NP0878A | 2029 | 2040 | 1993 | 2062 | 2008 | 2033 | 2006 | 2153 | 2591 |
391 symbols consensus -------------------------------------------MPEDDLEELPGVGPATA #oth 111111111111111111111111111111111111111123322231..2........1 hla0664 :::::::::::::::::::::::::::::::::::::::::::::::E::D::::::::: HVO_0104 ::::::::::::::::::::::::::::::::::::::::::::A:::::S::::::::: HQ3429A :::::::::::::::::::::::::::::::::::::::::::::::E::D::::::::S Hbo1389 ::::::::::::::::::::::::::::::::::::::::::::::::::S::::::::: Hut1974 ::::::::::::::::::::::::::::::::::::::::::MAATE:::D::::::::: Hmu2684 ::::::::::::::::::::::::::::::::::::::::::MSTSE::::::::::::: rrnAC2910 ::::::::::::::::::::::::::::::::::::::::MSMSASE::::::::::::: VNG2473 MGRDSARRLLSTPSRRRPSAATSFTFSVLYTRLYAWGGTTRRY:::S::::::::::::: NP0878A :::::::::::::::::::::::::::::::::::::::::MAATTA::::::::::::: consensus DKLVDNGFDSYQSIAVASPGELSNTADIGESSAADIIQAAREAADIGGFETGATVLERRE #oth 1..412.1121.21...112.1..1..1.1.212.1.1...1...1....1.14..2..1 hla0664 ::::E:::E::::::::::::M:::::::::::S:::N:::D:::V:::::::::::::: HVO_0104 ::::ES:Y::::::::::::::::K::::S:T:S:::N:::D:::V::::::SM:::::Q HQ3429A :::::A::E:::A::::::A:M:::::V:::T:S:::N:::D:::V:::::::A::Q::: Hbo1389 :::T:A::E:::A::::::S:::::::V:::TSS:::N::::::::::::::SA:::::: Hut1974 E::TE::Y::::G::::::::::::::V::::::::::::::::::::::S::E:::::: Hmu2684 E::K:::::G::G::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2910 E::E:::Y::::G:::::::::::::::::::::::::::::::::::::::S::::::: VNG2473 E::R:::::AF::L:::NSA:::::::::::T:::V:::::::::V:::::::::::::: NP0878A :::RE::Y:::::::::::A:::::::::::N:N:::::::::::::::::::D::D::: consensus QIGKLSWGIDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSA #oth 1....2.513.1.11....2............11....1...21.1....3.3...3.32 hla0664 E::::::Q:::::::::::I::::::::::::AS::::::::M:::::::::::::D:GC HVO_0104 :::::::Q:::::E:::::L::::::::::::::::::I:::::::::::P:Q:::G:GC HQ3429A E::::::K:P:::E:::::I::::::::::::::::::::::M:::::::P:::::G:A: Hbo1389 :::::::::S:::::::::L::::::::::::::::::::::M:::::::P:::::G::C Hut1974 :::::T::VE:::E:::::::::::::::::::::::::::::::::::::::::::::S Hmu2684 :::::T:SVS:::::::::I::::::::::::::::::::::IS:T:::::::::::::: rrnAC2910 ::::::::V::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2473 :::::T:N:P::::::::::::::::::::::::::::::::::::::::T:Y:::H:R: NP0878A :::::E:L:P:I:EM:::::::::::::::::::::::::::::::::::E:A:::H:RC consensus IFVDSEDTFRPERIDDMVRGLDDEVLADTMELREI-----EGDPDDEETMEELVDSFLDK #oth 1.1...........12.12..411313131241122112211334.123332.2422.12 hla0664 :::::::::::::::::::::::DI:::E::R::::::::::T:N:::A::::IAA:::Q HVO_0104 ::I::::::::::::::::::E::A:EA:LDD::M:::::::SI:::::IKA:::D:::: HQ3429A :::::::::::::::::L::::::IIT:LL:R::::::::::T:G:D:::KA:L:::::H Hbo1389 ::::::::::::::::::::::::IIQA::DE::::::::::S::::AA::::LND:::: Hut1974 ::I:::::::::::EQ::E::E:D:I::::V:HGVAEE:G:A::A:DDHFDD:IE:I::: Hmu2684 :::::::::::::::Q:::::::D::E:::V:HG:VEEAGDA:AG:::LL:A::E:V::: rrnAC2910 ::::::::::::::EQ::K::A::::::::V:HG:VEEEADA::T::ALLDD::A:V:E: VNG2473 V:I::::::::::::::::::S::T:QAA::AH:::::::::ST:::D:LT::::A:::: NP0878A V::::::::::::::E:::::PED:IEAAL:E::::::::D:N:::::::::::Q::::: consensus IHVAKAFNSNHQILLAEKAKELASEHEDDEFPVRLLCVDSLTAHFRAEYVGRGELADRQQ #oth .....1......1......1.1.31411422.1.212................2..1... hla0664 :::::::::::::::::::::::G:L:ES:W:I:IV:::::::::::::::::::::::: HVO_0104 :::::::::::::::::::::::G::::T:W:::::::::::::::::::::::::E::: HQ3429A :::::::::::::::::::::::RDNQ:SG:::::::::::::::::::::::S::E::: Hbo1389 :::::::::::::::::::::::RD::E:::::::::::::::::::::::::Q::E::: Hut1974 :::::::::::::::::::Q:::::GQ:E::::::::::::::::::::::::::::::: Hmu2684 :::::::::::::::::::Q:I:::SQ::D:::::::::::::::::::::::::::::: rrnAC2910 :::::::::::::::::::Q:I:::SQEE:::::::A::::::::::::::::::::::: VNG2473 :::::G::::::M::::::::I::::::GDW:::M:T::::::::::::::::::::::: NP0878A :::::::::::::::::::Q:I:A:::EGDY::::::::::::::::::::::::::::: consensus KLNKHLHDLMRVGDLYNTAVLVTNQVASNPDSFFGDPTQPIGGNILGHTSTFRMYLRKSK #oth ........1211.1.2.1121.....21...11.....11........2....2..1... hla0664 :::::::::::I:::F:::I::::::::::::Y::::::A::::::::A::::::::::: HVO_0104 :::::::::::I:::F::GI::::::S:::::Y::::::::::::::::::::I:::::: HQ3429A :::::::::::I::::::::::::::::::::Y::::::::::::::::::::::::::: Hbo1389 :::::::::::I::::::::::::::::::::Y::::::::::::::::::::I:::::: Hut1974 :::::::::::::::N::::V::::::A:::::::::::::::::::::::::L:::::: Hmu2684 :::::::::::::::N::::V::::::A:::::::::::::::::::::::::I:::::: rrnAC2910 :::::::::::::::N::::V::::::::::::::::::::::::::::::::::::::: VNG2473 :::::::::EK::N:::A::::::::Q::::A::::::K:::::::::K::::::::::: NP0878A ::::::::ID:::N:::A:TV:::::Q::::A::::::K:::::::::K:::::::K::: consensus GDKRIVRLVDAPNLADGEAVMRVQDGGLKPE #oth 11....1.......1...11...233..23. hla0664 :N::::::::::::::::::::::GE::::: HVO_0104 :::::::::::::::::::I:::::A::::: HQ3429A N::::::::::::::::::::::K:A::::: Hbo1389 ::::::::::::::::::GI::::::::::: Hut1974 ::::::::::::::P:::G::::EG:::MA: Hmu2684 :N::::K:::::::P::::::::EE:::MD: rrnAC2910 :N::::K:::::::P:::G::::EED::LN: VNG2473 N:::::K::::::::::::::::::E::::: NP0878A ::::::K:::::::P::::::::END:::::