|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2072 | Hut0837 | rrnAC2090 | Hmu0376 | VNG0084 | HQ1425A | hla1980 | NP0052A | hla0124 | HVO_0558 | Hbo0973 |
1304 | Hut0837 | 2015 | 1192 | 1203 | 1216 | 1099 | 1162 | 1196 | 1121 | 1073 | 1195 |
1656 | rrnAC2090 | 1192 | 2082 | 1685 | 1432 | 1357 | 1456 | 1495 | 1357 | 1337 | 1457 |
1640 | Hmu0376 | 1203 | 1685 | 2096 | 1381 | 1338 | 1438 | 1458 | 1352 | 1336 | 1455 |
1613 | VNG0084 | 1216 | 1432 | 1381 | 2103 | 1331 | 1575 | 1517 | 1345 | 1332 | 1402 |
1571 | HQ1425A | 1099 | 1357 | 1338 | 1331 | 2271 | 1309 | 1381 | 1451 | 1453 | 1555 |
1607 | hla1980 | 1162 | 1456 | 1438 | 1575 | 1309 | 2206 | 1566 | 1356 | 1293 | 1368 |
1721 | NP0052A | 1196 | 1495 | 1458 | 1517 | 1381 | 1566 | 2079 | 1526 | 1509 | 1575 |
1617 | hla0124 | 1121 | 1357 | 1352 | 1345 | 1451 | 1356 | 1526 | 2083 | 1603 | 1613 |
1619 | HVO_0558 | 1073 | 1337 | 1336 | 1332 | 1453 | 1293 | 1509 | 1603 | 2070 | 1675 |
1725 | Hbo0973 | 1195 | 1457 | 1455 | 1402 | 1555 | 1368 | 1575 | 1613 | 1675 | 2078 |
312 symbols consensus --------------------------MSLSLDATQLDRYSRHIIMDDVGPEGQAALLDAS #oth 111111111111111111111111124523.233.....1.111.111.14..23.1335 Hut0837 :::::::::::::::::::::::::MS:PN:EQG:::::A:Q:V::::::A::::::EG: rrnAC2090 :::::::::::::::::::::::::::RPD::PE:::::::::::N::::::::T:::TD Hmu0376 ::::::::::::::::::::::::::-MVD::PE::::::::V:::::::S::::::::: VNG0084 :::::::::::::::::::::::::MSG:E:::::::::::::::::::AT:::::RE:A HQ1425A MSPPPAPRPNDGSESTSNSDESTRVPGG::::S:::::::::::::EL::::::Q::N:D hla1980 :::::::::::::::::::::::::MSD:D::P::::::::::::::::::::K:::::E NP0052A :::::::::::::::::::::::::MTD:::S:D:::::::::::::::::::KR::::N hla0124 :::::::::::::::::::::::::::::::::D::::::::V:::E::::::KR:::GR HVO_0558 :::::::::::::::::::::::::::T::::::::::::::::::E::::::GR::SSR Hbo0973 ::::::::::::::::::::::::::::::::::::::::::::::E:::P::KR::::: consensus VLVVGAGGLGSPVIQYLAAAGVGTLGIVDDDVVERSNLQRQVIHGDDDVGRPKVDSAAAF #oth 1122.1....1.21.....1.1.31121.1.3..1......12.422...44.11..231 Hut0837 :::::V::::::::::::::::::::L:::::::::::::::V::T:::::A:::::E:: rrnAC2090 :::I::::::A::L:::::::I:R::::::::::::::::::::K::::::S::::::E: Hmu0376 :::::::::::::L:::::::I:R::::::::::::::::::L:T::::::::::::SE: VNG0084 ::::::::::::::::::::::::I::A:::A::L::::::T:::T::::EQ:::::::: HQ1425A ::I:::::::::::::::::::::I::::::I::::::::::::R:E:::DS::::::R: hla1980 :::L::::::A:I:::::::::::I::A:::E::L::::::::::N:::::K::::::D: NP0052A ::CI::::::::I::::::::::::::A::::::::::::::::::::::Q:::E::::: hla0124 A:::::::::A:::::::::::::I::::G::::::::::::::::A:::E:::E:::RY HVO_0558 :V::::::::A:A::::::V:::E:VV:::::::::::::::V:C:::::T::AE::::: Hbo0973 :::::::::::::::::::::::H::::::::::::::::::V:R:::::T:::E::::: consensus VAGLNPDVTVETHETRLDADNVEELIAGYDVVVDASDNFATRYLVNDACTLAGIPFSHGA #oth 1551...12.45224.3334327322331.4.1.22.11411122..2133423.32..1 Hut0837 ::Q:::::::RCY:::F:E:E:P--LGE::::I::T:SIEAL:QL::::VT:EL:LV::: rrnAC2090 :T::::::::DR::L::ARE:ATD:V:D::I:::::::::::F::::::::S:T:::::: Hmu0376 ::DR::::::DAY::::TR::A::V::D::L::::::::G:::::::::::::T:V:::: VNG0084 :DT:::::D:QR:DQ:VT::T:TD:::A:::::::::::R::::I::::::::V:::::: HQ1425A ITD::::I::V::R::I:KQSIS:V:P:::M::::::::P::::L::F:Q:QK::IA::: hla1980 ::Q::::ID:RK::M:VT:::I::::S:::F:::GT:::::::::::::::::V:::::S NP0052A :EA::::::::P::::VT:::IDG:L:E::::::G::::::::::::::::::V::A::: hla0124 :DR::::ID:::Y:::::EG::RD:L::::L:::CA:::R:::V::::ARIE:L:VV::: HVO_0558 :R::::::S::PV:A:V:KS::H:VV::S::::::::::P::::L::V:RFE:::LV::: Hbo0973 :H::::::::::Y::::EKE::-GVL:D:::::::::::P:::::::F:RINE::VA::: consensus IYKFEGQVTTF--GPDGPCYRCLFPEAPEPGTVPDCATAGVLGVLPGTVGCIQATEAVKL #oth 133....3.11325322........1..12.21.1.211..1.11.111.13....22.3 Hut0837 VSA::::::S:::DGGA:::::::::::PA::I:::E::::I:AV:SVI:S::::::I:H rrnAC2090 :FQ::::::::::SG:S:::::::::::PE::::::::::::::::::I::M::::V::: Hmu0376 ::R::::::::::SGE:::::::::S::PE:A::::::::::::::::I::F::::V::W VNG0084 :FQ::::::::TG:D:::::::::::::PA::::::::::::::::::I:S:::::T::H HQ1425A :::::::L::L::I::::::::::::::::::I::::AT::::A:::::::L:::::M:V hla1980 :F:::::::::AG:E:S:::::::::::PA:M::N:S::::::::::::::L::::T::H NP0052A :LR::::I:::EAT:E:::::::::::::::::::::::::::::::::::::::::::: hla0124 :::::::A::L::V::::::::::::::::::::::::T::::::::::::::::::I:: HVO_0558 :::::::A::L::V::::::::::::::::::::::::T::::::::::::::::::M:: Hbo0973 ::::::::::L::T::::::::::::::::::::::::T::::::::::::::::::::: consensus ILDEGETLDGRLLFYDAADMSFEEVPYAPRPDCPVCGDDP-IDSVADVEYTGSCAVSED- #oth 4226.33.3.22231..421212413445332.12..23123522443314541425533 Hut0837 L::I:T::T::::R:::RS:::T:I:FES:E::QT::ES::AGGP:AT:R:RGSTLE--: rrnAC2090 AM:Y::::E:::VA::::E:::::::I::K::::::::::A:A::::AS:E:R:SLA::: Hmu0376 F:::::S::::::V:::SE::VD:::I::N:::::::S::ALS::TEA::D:R:SL::SV VNG0084 ::GV:DS::::::::::::::::T:AL:Q::E::I:::S:VV:::QE:A::E::::TG:A HQ1425A ::NA:NP:T:K:I::::LEAT::QIS:Q:D:T::::::T:::Q:IES:::::::E:::-: hla1980 :IG:::::::SM::F::L::E:DK:EIPK:D:::::::::A:E::H::::SA:::IDIGD NP0052A V:GH:::::::M::::::::::::I:VEK:::::::::GG:VE::H::D:EST::I---: hla0124 L::T:::::::V:::::M::T::S:::RRN:::::::::G::ETIEGID:S:G:R:DA:: HVO_0558 L:::::A::::::::::M::T::T:::RTN:::::::EGG:V::IE:ID:VE:::I:L:: Hbo0973 V::::DP:V::::::::M::T::T:::RRNS::::::::::::::::::::DA::::L:: consensus ------------ #oth 321111111111 Hut0837 :::::::::::: rrnAC2090 :::::::::::: Hmu0376 SD:::::::::: VNG0084 TTE::::::::: HQ1425A :::::::::::: hla1980 DDESEPEIEASD NP0052A :::::::::::: hla0124 :::::::::::: HVO_0558 :::::::::::: Hbo0973 ::::::::::::