|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2310 | VNG0179 | hla0007 | HQ1420A | HVO_0569 | Hbo0961 | NP0248A | Hmu0459 | rrnAC2036 | Hut0058 |
1767 | VNG0179 | 2300 | 1609 | 1475 | 1633 | 1539 | 1581 | 1611 | 1658 | 1575 |
1913 | hla0007 | 1609 | 2346 | 1666 | 1719 | 1690 | 1664 | 1595 | 1669 | 1681 |
1810 | HQ1420A | 1475 | 1666 | 2319 | 1695 | 1752 | 1607 | 1545 | 1586 | 1589 |
1927 | HVO_0569 | 1633 | 1719 | 1695 | 2300 | 1840 | 1653 | 1609 | 1660 | 1653 |
1919 | Hbo0961 | 1539 | 1690 | 1752 | 1840 | 2308 | 1648 | 1547 | 1623 | 1662 |
1860 | NP0248A | 1581 | 1664 | 1607 | 1653 | 1648 | 2297 | 1618 | 1689 | 1609 |
1823 | Hmu0459 | 1611 | 1595 | 1545 | 1609 | 1547 | 1618 | 2313 | 1787 | 1726 |
1881 | rrnAC2036 | 1658 | 1669 | 1586 | 1660 | 1623 | 1689 | 1787 | 2285 | 1798 |
1890 | Hut0058 | 1575 | 1681 | 1589 | 1653 | 1662 | 1609 | 1726 | 1798 | 2300 |
308 symbols consensus MVRNVAGVMAELEPEDFHLLSGVEQGMRFSEWVNREKLPEFSRLTPEEVDYRLDRCMDRE #oth ..2...53112.121..1....1.1....111.412.1133121251213..11.132.2 VNG0179 ::::::DEI:A:D:::::::::::H::::::::S::::::::::::Q::::::::ML::: hla0007 :::::::D::::D::::Y:::::::::::::::R:D:I::YAN::R::::::I:::L::: HQ1420A :::::::::T:::::::Y:::::::::::::::::G:::QL:G:S::::G::::::AT:: HVO_0569 :::::::::::::::::Y:::::::::::::::::::::KN:G::A::::::I::::T:: Hbo0961 :::::::::::::S:::Y:::::::::::G:::::G:::DL:G::::N:E:::N:::R:D NP0248A ::Q:::TQ:::::EP:::::::I:H:::::R::AEG:::K::::DE::LT:::::::::: Hmu0459 ::Q:::RE::D::::::::::::::::::::Y:D:::::Q:::::A:D::::::::E::G rrnAC2036 ::Q:::S::::::::::::::::::::::::Y:A::::T::::::T:D::::::::A::G Hut0058 ::S:::P:I:::::::::::::I::::::::::S:::I:::A:M:V:D::::::::E::G consensus LIERKTIQYEGYKLTFEGYDALALRTFAERDTIDGVGAPLGVGKESDVYEVQSYKPLALK #oth 12....1..3.24.221...2...11122.2112.1.11..1...1..2.13.11.2... VNG0179 FL:::::::::VQ:::A:::V:::H::::::SVE:F:::::::::::::::::FR:M::: hla0007 ::::::::::::Q::::::::::::::S::E::::::S:::F:::G::::A::F:::::: HQ1420A ::::::::::::T:KA:::::::::::SK:E:V:::::::::::::::L::K:::::::: HVO_0569 :V:::::::V:::::V::::::::::::Q::::Q:F::::::::::::F::::F:::::: Hbo0961 :V::::::::::::AV:::::::::::SK::::Q::::::::::::::F::::::::::: NP0248A :::::::::T::R::::::::::::::S::ES:::::S::::::::::::AR:FR::::: Hmu0459 FL::::M::::F::::::::::::HALV::G::E:F::::::::::::F::S::::M::: rrnAC2036 :V:::::::::F::::::::T:::H::::::::E:::S::::::::::::A:::::V::: Hut0058 :::::::::Q:FS:::::::::::H:::::ES:Q:::SS::::::::::::::::::::: consensus FHREGYTNFREVMREREYTADREHVSWLYTARKAAEREYDALETLYPDVSVPRPVDHNRH #oth 1......1....411.1..1123.2..2...........211.3.1.4.2..1.1.2... VNG0179 :::::::Q::::H:G:D::SEK::T::Q:::::::::::::::A:::T:N:::::::::: hla0007 Y:::::::::::N:::::::::D::::::::::::::::E:M:A:::::::::::::::: HQ1420A ::::::::::::::::D::::N:::::::::::::::::EV::A::::::::Q:I:Q::: HVO_0569 ::::::::::::R:::D::SENH::::::::::::::::E:::::F:E:::::::::::: Hbo0961 :::::::::::::::::::S:NQ::::::::::::::::EV::D::::::::::I:Q::: NP0248A ::::::::::::QK:::::::N::R::F:::::::::::::::::::E::::::::Q::: Hmu0459 :::::::Q::::NK::::::::D::::Q:::::::::::::::::::::R::Q:I:T::: rrnAC2036 Y::::::::::::K::::::::D::::::::::::::::::::::::N::::Q:I:T::: Hut0058 Y::::::::::::::::::::::::::::::::::::::T:::E:::G:::::::::::: consensus AIVMEKFDGVELSRAKLEDQQVVGVLDLILREMATAYDAGYVHADMSEYNVFVGEDGVTI #oth ..1.214311..3211.353.151111.1.5.234..44.11...1..1.11.444.122 VNG0179 ::::::VS:T:::N:::NPE:AS:::::::::V:A::RE::::::V:::::::DS:::VL hla0007 ::::D:::::::A::::DPE:AI:::::V:::LL::::L:WI::::::H::A:A:S:::: HQ1420A ::::D::ES:::N::Q:PQ::A::::E::::::QC::EN::::::::::::A:S:::::V HVO_0569 ::I:A:::::::AK::::SE::T:::::::S:::D::A:::::::::::::A:::R:::V Hbo0961 ::::::LG::::D::::::D::::::::V:N:V:A::::::::::::::::A:::Q::I: NP0248A ::::::V::::::::::DAD:::::AE:::E::::::N:::::::::::::::AA::::: Hmu0459 ::::::I:::::::T::D::::RP::E:::T::G::::D:::::::::::::::T::I:: rrnAC2036 ::::::I:::::::T:::TA::LPI:::V:E::Q:::RE::::::::::::::TNE::VV Hut0058 :::::RM:::::::T:::::::RP::::::D:VQN::E::::::::::::I::::S:::V consensus FDWPQAVPTDHENARELLARDVENILGYFRRKYPHEIP-DVDEDA----VADAIAAGEFD #oth .....11121.2.12.2.4..23.2141.41...643324216431111234222424.4 VNG0179 ::::::T::::::::::::::::::VQ:::Q:::SDV::A::H:::::::VG:V:DDA:A hla0007 ::::::::V:::::::F:E:::::L:R::G::::::V:R:A:IEG::::I::::VD:S:T HQ1420A :::::::S::::::H:R:C::IS:L:T::E::::NSTD:RI:AESDAVRI:NS::::Q:E HVO_0569 :::::::::::D:::::::::AK::V::::::::G:M:DE::I::::::LS::::GN::E Hbo0961 :::::::S:::D::::::E:::K:V:::::::::AS::D:I::PS::::LC::V:EN::Q NP0248A :::::S:::E:::SD:::V:::::L::H:E::::S:T::A:::R:::::L:::L::D::: Hmu0459 ::::::::A::A::D::::::::::::::Q::::RFVD::IEV::::::::::LL::::E rrnAC2036 ::::::::::::::::::T::::::VS::E::::Q::S:N::R::::::::ERL:TDA:: Hut0058 :::::::::E::::::::E:::T::::::T:::::A:E:::EDTT::::::A:::E:R:: consensus SVRAFA-- #oth 12333651 VNG0179 ::TEH-:: hla0007 TI:::GEE HQ1420A ::D:IP:: HVO_0569 ::DE::V: Hbo0961 T:::::N: NP0248A :L:::EQ: Hmu0459 :LSDHD:: rrnAC2036 :ITE:TE: Hut0058 :IDSDET: