|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2669 | VNG1259 | hla0219 | HQ1652A | HVO_1123 | Hbo0437 | NP2680A | Hut2790 | rrnAC1129 | Hmu1447 |
2025 | VNG1259 | 2718 | 1768 | 1854 | 1819 | 1839 | 1842 | 1861 | 1902 | 1130 |
2160 | hla0219 | 1768 | 3590 | 1862 | 1953 | 1955 | 1879 | 1880 | 1973 | 1233 |
2190 | HQ1652A | 1854 | 1862 | 2691 | 2052 | 2146 | 1890 | 1927 | 1968 | 1200 |
2238 | HVO_1123 | 1819 | 1953 | 2052 | 2634 | 2314 | 1853 | 1839 | 1984 | 1177 |
2277 | Hbo0437 | 1839 | 1955 | 2146 | 2314 | 2689 | 1880 | 1884 | 1994 | 1212 |
2105 | NP2680A | 1842 | 1879 | 1890 | 1853 | 1880 | 2665 | 1890 | 2031 | 1234 |
2137 | Hut2790 | 1861 | 1880 | 1927 | 1839 | 1884 | 1890 | 2654 | 2018 | 1209 |
2319 | rrnAC1129 | 1902 | 1973 | 1968 | 1984 | 1994 | 2031 | 2018 | 2652 | 1335 |
1397 | Hmu1447 | 1130 | 1233 | 1200 | 1177 | 1212 | 1234 | 1209 | 1335 | 1660 |
472 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1259 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0219 MRSTRSAPPADTRPWPARRSRSESFKRFRSQSRSKTSSRRSLPGASSRRSTTLPRRRQAR HQ1652A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1123 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0437 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2680A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2790 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1129 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1447 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------------------------------------T--MDDF #oth 111111111111111111111111111111111111111111222222222232345345 VNG1259 ::::::::::::::::::::::::::::::::::::::::::MTEATADRTAL:DGGR:V hla0219 YRSFRESDGGSSPTPSVPLSRPPVLLVSRPPAPLAVPPAAPEGATYILRDGEPVAMT::V HQ1652A ::::::::::::::::::::::::::::::::::::::::::::::::::::M:AQT:ES HVO_1123 ::::::::::::::::::::::::::::::::::::::::::::::::::::M:EDA:S: Hbo0437 ::::::::::::::::::::::::::::::::::::::::::::::::::::M:EDD:A: NP2680A :::::::::::::::::::::::::::::::::::::::::::::::::::::-:::T:D Hut2790 :::::::::::::::::::::::::::::::::::::::::::::::::::::-:::T:E rrnAC1129 :::::::::::::::::::::::::::::::::::::::::::::::::::::-:::TES Hmu1447 :::::::::::::::::::::::::::::::::::::::::::::::::::::-::---- consensus VEHRRLIIAGSGIAGLSAAIYAARSNNDPLVLEGDEPGGQLTLTTEVENYPGFPEGISGP #oth 321131222121322122131121211211231121111111112213121111212413 VNG1259 ::::Q:V:V:::::A::::T::::::::::LF::::::::::::S::::::::::::A:A hla0219 ::::::::::T:::::T:::::::::::::LV:::::::::::::D:::::::::::::: HQ1652A ::::::V:::::::::::::::G:A::::::::::::::::::::::::::::::::::: HVO_1123 ::::K::::::::S:::S:::::::::E:::::::::::::::::::D:::::::::::: Hbo0437 ::::K::::::::S::::::::G::::E:::F:::::::::::::::::::::::::::: NP2680A AD::::::::::::::T:::::::::::::::::P::::::::::D:A::::::D::G:: Hut2790 I:::::::::::T:::T::V::G:A::::::::::::::::::::D:A:F:::::::N:T rrnAC1129 :::::::V::T:A:::T:::::::::::::::::::::::::::S::::F::::::L::: Hmu1447 ------------------------------------------------------------ consensus ELINNMKEQAERFGAEIRHGIVEDVD-DSERPFRVELSNGDVYTADALIAASGASARTLG #oth 212231141133112343313244231334323333352132113114121111111111 VNG1259 :::QE::T::T:::::VE:::::S:::::G::::LT:T:::::::::V:V:::::::::: hla0219 :::::::A::TK::::A:N::IV::SKEPAGH::::::D::::::::F:::::::::::: HQ1652A :::Q:::S:::::::D::::V::T:N::D:Q:VILNI::::T::T::::V:::::::::: HVO_1123 ::::::::::::::T::::::I:::::A:::::T:T:K:::::::::::::::::::::: Hbo0437 :::Q:::::::::::::D:::::S:S:AD::::T:TMK:::::::::I:::::::::::: NP2680A D:V::::::::Q:::T:D::VIDA:::-PGQ:H:I::RD:T::::::::::::::::::: Hut2790 ::::R:::::K::::DVET:F::SI::::S:::::::AD:A:::C::F:::::::::::: rrnAC1129 D:::::::::::::::LE::::A:I:::::::::::::::::::C::F:::::::::::: Hmu1447 --------------------------:--------------------------------- consensus IPGEDELMGYGVSTCATCDGAFFRGEDMLVVGGGDAAMEEASFLTKFADTVYIAHRREEF #oth 2111331..1.1............1.212.1......3...4......11..11...111 VNG1259 :::::::::Q::::::::::::::::::I::::::::A::::::::::::::LV:::D:L hla0219 V::::::::::L::::::::::::D::::::::::::::::N:::::::::::::::::: HQ1652A :::::::::::L::::::::::::::EIM:::::::::::::::::::S::::V:::::: HVO_1123 ::::EN:::::L::::::::::::D:KIM:I::::::V:::N::::::S:::LV:::::: Hbo0437 :::::::::::L::::::::::::::KI::I:::::::::::::::::SK:::::::::: NP2680A V::::::::::::::::::::::::::::::::::::C:::A::::::::::L::::::: Hut2790 ::::GD::::::::::::::::::D:::::I:::::::::::::::::::::::::::A: rrnAC1129 V::::::::::::::::::::::::::::::::::::::::H:::::::::::::::::: Hmu1447 -------:::::::::::::::::D::::::::::::::::T::::::::::L::::::: consensus RAEDYWVDRIMEKVDDGDIEIMRNTELTEIHGSPEDGVDHVTLVRHPEGHPSEKLDDP-- #oth ....1.21.3213123111.213...23.3..12.1.12221123111.1.221..2212 VNG1259 ::::::A:::R:H:A:::::VLW:::AV:V:::::E::TGAS:::::::::TA:::AD:: hla0219 ::::V:IE:T::::E::E::LLL:::::::::T::::I::::::E::D:::T::::::AT HQ1652A ::::::::::::H::N::V::::::::I:L::TR:::::YT::::::::Y:::::::::: HVO_1123 :::::::::L:::::E:E::L:L:::A::L:::::E:::::::::N::::::D::::::: Hbo0437 :::::::::V::::E:DE::L:::::V::L::T:::::::::M::::::::TD::::::: NP2680A ::::::::::R:LEA:::V:VLT::::V::::T::::::::::AHN:D:Y:::::::D:: Hut2790 ::::::::::::H::A::V:::::::A::::::R:::IEG:S:I:::D:::K::::SE:Q rrnAC1129 ::::::I::VQQ:::E:E:::::::::L:M:::::::::::::AQND:::::::::AD:: Hmu1447 ::::::I::VQ:Q:E::::::::::::L:::::A:::::::::A:ND::Y:::A:::::: consensus --ETEEFDFDVGAVFYAIGHTPNTDYLEDTGVELDDTGYIQTEGGTGGGQTATDVPGIFG #oth 122113313.2..1.4.......131.42.2.34.24..26151.7.121.1.214.2.1 VNG1259 :::::QLEL:I::F:I::::::::SF:A::::VC::A::V::V::A:::::K:::T:V:: hla0219 AD:VD:Y::::::::F::::::::EF::G:E::T::E::LL::::R::N::::G:E:L:: HQ1652A :::::T:E::::::::::::::::E::HN:::S:::R::LDAA::D:::::K::A::::A HVO_1123 :::::::::::::::::::::::A:::DG:::QR::D:::VAK::S:::::::::::::A Hbo0437 :::::::::::::::::::::::A::::G::::R::D::VKAK::::::::::::::::A NP2680A ::A::TTER:L::::M::::::::E:::G::::M:A::::H:Q::E:::::K:::S:::: Hut2790 AE:V:H:EH::::::L::::::::G:::::D::::E::::R:V::H:::::K:::::::: rrnAC1129 ::G::T:::::::::I:::::::::::G::::::::::::::H:::::D::::::D:::: Hmu1447 :::::Q:::::::::L::::::::G:::::::::::A::L:::S:V:D:E:::A:E:L:: consensus AGDVVDYHYQQAVTAAGMGCKAALDADEYLEELER-EAEAEAEAAAAAEADD #oth ......2.....2..1.1.21..1.1.1..1442213535545563135211 VNG1259 :::::::::::::::::::S:::I:::::::SV--:ADGVTG:T:D:TP::: hla0219 ::::::F:::::::::::::Q:::::::::T:R:::AG:LYEPT:D::T::: HQ1652A ::::::::::::A::G:::V:::::V:::::D::QNQ:TTVDTDV::V:S:: HVO_1123 ::::::::::::A::G:::V:::::::D::::::::-----E:KQ:::G:AE Hbo0437 ::::::::::::A::G:D:V:::::::D:::N::::::::TEVEP::::S:: NP2680A ::::::H:::::I::G:::::::I:::::::A:::::EG:V:D:D:::AS:: Hut2790 :::::::::::::::::::SQ::::::D::::---:Q:::::TETSV::T:: rrnAC1129 :::::::::::::::::::::::I:::::::AQA-:::T::::SE::::::: Hmu1447 ::::::H::::::::::::::::::::::::S:--:-P:SSQA:ET:PQ:::