|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1629 | hla0159 | Hut2130 | VNG2147 | HQ3251A | HVO_0309 | Hbo1172 | rrnAC3151 | Hmu2599 | NP5034A |
1292 | hla0159 | 1628 | 1071 | 1148 | 1109 | 1179 | 1167 | 1160 | 1142 | 1161 |
1241 | Hut2130 | 1071 | 1609 | 1178 | 1071 | 1127 | 1084 | 1122 | 1144 | 1098 |
1259 | VNG2147 | 1148 | 1178 | 1703 | 1108 | 1216 | 1101 | 1177 | 1192 | 1130 |
1312 | HQ3251A | 1109 | 1071 | 1108 | 1801 | 1279 | 1376 | 1147 | 1197 | 1168 |
1379 | HVO_0309 | 1179 | 1127 | 1216 | 1279 | 1615 | 1364 | 1199 | 1223 | 1207 |
1349 | Hbo1172 | 1167 | 1084 | 1101 | 1376 | 1364 | 1716 | 1200 | 1236 | 1171 |
1378 | rrnAC3151 | 1160 | 1122 | 1177 | 1147 | 1199 | 1200 | 1616 | 1321 | 1276 |
1393 | Hmu2599 | 1142 | 1144 | 1192 | 1197 | 1223 | 1236 | 1321 | 1618 | 1269 |
1326 | NP5034A | 1161 | 1098 | 1130 | 1168 | 1207 | 1171 | 1276 | 1269 | 1637 |
238 symbols consensus ---------MGVLENKARARLFYKYLSKVYDRVNPFIWNEEMRDEALAMLDIDPDDRVLD #oth 111111111..1..1.21..1......11..21.211.211..21.15412243312... hla0159 :::::::::::I::::SN:::::::::::::Q::R:T:T::::T:::SW:EFGD:PK::: Hut2130 :::::::::::I::D:S::::::::::R::::::::::::R::T:::DL::::A:::::: VNG2147 MRVQANSRS:::::D:::::T:::::::::::::T:::T::::A:::S:::::AE::::: HQ3251A :::::::::::I::D:EN::::::::::::::I::::::A:::::::KE:::::T::::: HVO_0309 :::::::::::::::::::::::::::::::::::::::::::::::E::::QQG::::: Hbo1172 ::::::::::::::::S::::::::::::::QI::Y::::::::D::EL:G:Q::::::: rrnAC3151 ::::::::::::::::::::T::::::::::QI:::::D:R:::::I::::LS:::K::: Hmu2599 ::::::::::::::::S:::T:::::::::::::::::::::::::I:K:::E:::H::: NP5034A ::::::::::::::D:::::::::::::A::TI::::::::::::::TWF:::DG::::: consensus VGCGTGFATEGLLEHTDDVHGLDQSIHQLEKAFEKFGKHDPVRFHRGDAERLPFADDSFD #oth .......1...1.22322121....3..14..34.1.2514.4122........4211.. hla0159 :::::::G:::I:::A:::::::::V::M:::::::::::R:N:Y:::::::::R::T:: Hut2130 :::::::G:::I:::::::Y:::::P::::::TT:L:D-:::Q:CF:::::::::::::: VNG2147 :::::::G:::::K::EH:Y:::::P:::T::W:::::::::A::F::::::::KP:::: HQ3251A :::::::::::::RYSQ:I:::::::::M::::S:::RT:D:K:Y:::::::::::N::: HVO_0309 :::::::G:::::RY:::::::::::::MQ::W:::::::E:::Y::::::::::E:::: Hbo1172 :::::::::::::RYS::::A:::::::MQ:::G::::N:E:::Y:::::::::::N::: rrnAC3151 :::::::::::::::V:T:Y:::::P:::S::::::::FGD::Y:L::::::::K::::: Hmu2599 ::::::::::::::A:EH:Y:::::A::::::YA::::RG::A:::::::::::Q::T:: NP5034A :::::::::::::::::::W:::::A:::A::YA::::RGT:N:::::::::::D:N::: consensus VVWSSGSIEYWPNPVDALRECRRVAKPGGRVLVVGPDYPNSTVFQKLADAIMLFYDEDEA #oth 22..........1.141.3.3..221..33..1...11.72421122.........131. hla0159 I:::::::::::::IEG:::L::::::::Q:::::::::HNP:L:RV::::::::::::: Hut2130 :::::::::::::::S:::::::::R:::Q::::::N::R:SI:::::::::::::AED: VNG2147 ::::::::::::H::QG:::L:::::::SQ:::::::::A::::R::::::::::::::: HQ3251A :I::::::::::::::::C:F:::V:::N::::::::::D:WI::Q:::::::::::T:: HVO_0309 :I:::::::::::::T::E:F:::V:::SK:::::::D:K:G:::::::::::::::E:: Hbo1172 :I::::::::::::::::E:F:::V:::R::::::::::E:GL::RV::::::::::H:: rrnAC3151 A:::::::::::::::::A::::LT::::K::I:::::::::::::M::::::::::E:: Hmu2599 ::::::::::::::::::E::::IT:::::::I::::::SQS:::::::::::::::::: NP5034A AY::::::::::::::::A:A:::T::::T::::::::::::L::::::::::::::::: consensus DRMFEAAGFEDIEHHIQQARPGSPRAITTIARVPEE---------------------- #oth 11..34..13331.32225612214..1.1.111332122122222222111111111 hla0159 ::::::::Y:AY:::::R:S:Q:::::::V:::S:::::::::::::::::::::::: Hut2130 ::::AE:::D:V::VTMGPGYNPEI::::V::::A-:::::::::::::::::::::: VNG2147 ::::RE::Y:E:Q:RVLRKE:N::P::V:V::A:AADD:::::::::::::::::::: HQ3251A QE:::T:::V:::::V:::Y::T:Q:::::::A:TADDTVDTPSQQQVSDPAAAPTTD HVO_0309 :::::::::V::::::L:RQ:::::::V::::A::::::::::::::::::::::::: Hbo1172 Q::::E:::V:::::::::Y::::K:::::::A::RDDADDEAAIEADT::::::::: rrnAC3151 ::::TK::Y:EF::::::S::::::::::::E:::-:::::::::::::::::::::: Hmu2599 :::::D:::T:F::F:::N:::::K::::::::::-:::::::::::::::::::::: NP5034A ::::A:::::TF::R:::RA::T::::::::E::D:K:::::::::::::::::::::