|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2684 | VNG1815 | hla0949 | NP4830A | Hut1110 | rrnAC3363 | Hmu2318 | HQ2774A | HVO_2508 | Hbo2173 |
2060 | VNG1815 | 2701 | 1759 | 1931 | 1805 | 1885 | 1887 | 1788 | 1847 | 1842 |
2170 | hla0949 | 1759 | 2669 | 2011 | 1977 | 1968 | 1930 | 1957 | 2069 | 1957 |
2361 | NP4830A | 1931 | 2011 | 2682 | 2131 | 2157 | 2115 | 1894 | 2114 | 2020 |
2263 | Hut1110 | 1805 | 1977 | 2131 | 2648 | 2261 | 2288 | 1919 | 1934 | 1949 |
2336 | rrnAC3363 | 1885 | 1968 | 2157 | 2261 | 2667 | 2338 | 1897 | 2024 | 1979 |
2316 | Hmu2318 | 1887 | 1930 | 2115 | 2288 | 2338 | 2651 | 1893 | 1974 | 1947 |
2100 | HQ2774A | 1788 | 1957 | 1894 | 1919 | 1897 | 1893 | 2796 | 2063 | 2159 |
2228 | HVO_2508 | 1847 | 2069 | 2114 | 1934 | 2024 | 1974 | 2063 | 2728 | 2152 |
2169 | Hbo2173 | 1842 | 1957 | 2020 | 1949 | 1979 | 1947 | 2159 | 2152 | 2708 |
366 symbols consensus MSDAYLALEDGRVVEARARAPGRTRGELVFTTAYTGYEESLTDPSYEEQVLTFSYPLIGN #oth .3...2.11221.2..12.2..31......................11.1...1...... VNG1815 :::::::::T:D::::T:::::MA:::::::::::::::::::::::A:::::A:::::: hla0949 :::::I::A::::L::::::::::::::::::::::::::::::::A::I:::::::::: NP4830A :T:::V:::::::::::::::::::::::::::::::::::::::::::I:::::::::: Hut1110 :T:::V:::GE::::::::S::TA:::::::::::::::::::::::::I:::::::::: rrnAC3363 :A:::V:I:GD::I::::::::TA:::::::::::::::::::::::::::::::::::: Hmu2318 :A:::V:I:GE::::::S::::TA:::::::::::::::::::::::::::::::::::: HQ2774A :L:::::::::::I:::G:::::::::::::::::::::::::::::::::::::::::: HVO_2508 :::::::::::::::::G:V:::::::::::::::::::::::::::::::::::::::: Hbo2173 :::::::::::::I:::G:S::Q::::::::::::::::::::::::::::::::::::: consensus YGVREERFESDRVHPRAAVARELTDDVAEWLEDEGVPAVDHIDTRDLVTEIREEGAMKCG #oth ....3..1..1111.1111.1.2.11111.153.12..1.22...11.141.12...31. VNG1815 ::::P::T:::::::S:V::::::::::D::RT:::::::G:::::::LD::DG:::QV: hla0949 ::::S:::::ES:Q::::I::::::::::::A::D::::::V:::EI::TV::::::A:: NP4830A ::::::::::::::::GV::::::E:::::::::::::::AL:::::::G:::Q:::::: Hut1110 :::::::::::::::::V:::::::::::::QT::R:::::::::E::::::D::::::: rrnAC3363 ::::::::::::::::::::::M:::::::::S::I:::::L::::I:::::D::::::: Hmu2318 ::::::::::::::::::::::M:::::::::S::::::::L::::I:::::D::::::: HQ2774A ::::S:::::E:I:::::I:::F::EIV::FNH:D:::I::::::E:::S:::::::N:: HVO_2508 ::::A:::::::::::::::::F:EE:V:::A:::::::::L:::::::S::::::::V: Hbo2173 ::::::::::::I:::::I:H:F:EE:V:::DS:D:::I::::::::::S:::::::::: consensus IAAGPDATPEDALAELAQCKGMSDHTDIGAQVSVDEHETYNG-GDGATVALVDCGAKGSI #oth .11.3.11132.521144.341.2131..32.1131731233322332...2.....2.. VNG1815 :::::::S:AT:R:Q::D:PRL:AR:E:::H::::TA::HG-:NGDT::::::::::R:: hla0949 ::::::::::::VE:MEA:EP::::V::::::::T:TTV:E::DGV:D:::L:::::::: NP4830A ::::::::::::E::::E:::::E:::::G::::::QL:F:AD:::P::::::::::::: Hut1110 ::::E:::E:::::::R:::H::::A:::N::::S:PVV::EG:::PD:::I:::::::: rrnAC3363 ::::::V:EQ:::D::HE::H:::::::::::::::V:VH:EG::::::::::::::::: Hmu2318 :S:::::SE:A::EQ::::EH:::::::::::::::R::H:EA:::P::::::::::::: HQ2774A ::V:S:V::G::T:::D::IS::::I:::KR:TTV::T::G:ANAEVH:::I:::::M:: HVO_2508 ::V:E:V:::::KE:::::::::E:V::::::TTT:LT:FE::DGDT::::::::::::: Hbo2173 ::V:D:V::A::E:Q::K:::::E::E::::::TV:::::R:::GE:D:::I:::::M:: consensus VDSLVERGATVHVLPYDATPEDVAAVDPDLLFISNGPGDPENFEAAQELVDEYVGDVPLA #oth 321122.114.121.1.212242621...1..1.......3.1421541.2223.32.2. VNG1815 I:AF:A::::::R:::::::A:I:::::::::::::::::A::D::EH:::::I:T::I: hla0949 IS::T::::D:::::::S::::::D::::V::V::::::::::I:::AV::AFA::L:M: NP4830A I::::D:::::EM::::::AD::K:::::V::::::::::K:::::AD:::::A:NL::: Hut1110 QE:::::D:V:::::::T:::A:QDL::::::::::::::::::::A:::::::::L::: rrnAC3363 AE:::::D:E:::F:::::ED:::::::::::::::::::::::Q:G:::ET:::::::: Hmu2318 :S:::::D:::::::::T:::T:DEL:::V::::::::::V:::Q:N:::A:K::::::: HQ2774A ::::::::VA:::::::T:::MLTE:::::::::::::::A::::::T::E::T:EI:I: HVO_2508 :::::D::::::::::::DA:::S:L:::V::::::::::::YT:THD::E:FA:E:::: Hbo2173 ::::N::::D:::::H:T:AAE:EEL::::::::::::::A::GD::A::E:F::EI::: consensus GICLGQQVVANALGGDTEKMEFGHRGVNQPVRDLRTGKVVMTTQNHGYTVADPGD-LDVT #oth .......1112....3....3...1......3.13132.1..........311.22.3.1 VNG1815 :::::::I::R:::::::::D::::::::::L:HDS:R:::::::::::::::::::T:: hla0949 ::::::::ITS::::S::::A::::::::::K::::E:::::::::::::::T:P::E:: NP4830A ::::::::I::::::E:::::::::::::::M::::E:::::::::::::SE::E::::: Hut1110 ::::::::::::::::::::::::::::::::::::DQ::::::::::::::::ET:E:: rrnAC3363 :::::::::::::::E:::::::::::::::::::SNR:::::::::::::::::K:::: Hmu2318 :::::::::::::::::::::::::::::::::::S:Q::::::::::::::::EK:::: HQ2774A ::::::::::R::::T::::N:::::::::::::DS::::::::::::::G:::ET:N:C HVO_2508 :::::::I::S::::T::::A:::H:::::::::Q::::::::::::::::::::K:::: Hbo2173 ::::::::I:R::::T::::D:::::::::::::N::::I::::::::::DE:::::N:: consensus QVNVNDDTPEGLENDDLDVITRQYHPEANPGPHDSLGFFDDVLAMAEE------------ #oth .1....2.2.1.3132.211........1...1.122...1..21246411111222234 VNG1815 ::::::G:::A:DSAP:::L::::::::::::::TR::::::::::DAS::::::::::Y hla0949 ::::::::V:::DSEE::::::::::::::::::::::::E::EL:RSE::::::::::: NP4830A ::::::E::::::S:E::I:::::::::::::::T::::::::G:V:::::::::::::: Hut1110 :I:::::::::::::::NI:::::::::::::N:::A:::::::LV:-:::::::::::: rrnAC3363 :I:::::::::::::::NI::::::::::::::::::::::::G::G::::::::::::: Hmu2318 ::::::::::::::::::I:::::::::::::N:::D:::::::L::::::::::::::: HQ2774A :I::::G:A:::T:R:::::::::::::H::::::F::::E::E:TGQDTATETDSSSDR HVO_2508 ::::::::A:::ASEE:S::::::::::H:::::::::::::::::GTE:::::GNEHKP Hbo2173 ::::::::A:::::AE:N::::::::::H::::::::::::::G:VNGT:::::::::EH consensus -PVA-D #oth 543243 VNG1815 T:ATA: hla0949 P:::A: NP4830A ::A:TQ Hut1110 :---:- rrnAC3363 :---:- Hmu2318 :---:- HQ2774A AVI:DN HVO_2508 RA::S: Hbo2173 KL::D: