| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3180 | Hbo3442 | VNG2471 | hla1022 | HQ3427A | HVO_0109 | Hbo1387 | Hmu2630 | Hut1929 | rrnAC3104 | NP0936A |
| 2390 | Hbo3442 | 4142 | 2117 | 2119 | 2147 | 2284 | 2234 | 2137 | 2276 | 2175 | 2178 |
| 2542 | VNG2471 | 2117 | 3186 | 2325 | 2312 | 2370 | 2301 | 2210 | 2340 | 2365 | 2380 |
| 2674 | hla1022 | 2119 | 2325 | 3689 | 2470 | 2592 | 2537 | 2281 | 2270 | 2295 | 2340 |
| 2643 | HQ3427A | 2147 | 2312 | 2470 | 3271 | 2640 | 2621 | 2277 | 2307 | 2337 | 2252 |
| 2804 | HVO_0109 | 2284 | 2370 | 2592 | 2640 | 3256 | 2771 | 2427 | 2434 | 2415 | 2414 |
| 2743 | Hbo1387 | 2234 | 2301 | 2537 | 2621 | 2771 | 3247 | 2377 | 2428 | 2391 | 2343 |
| 2617 | Hmu2630 | 2137 | 2210 | 2281 | 2277 | 2427 | 2377 | 3164 | 2435 | 2486 | 2455 |
| 2617 | Hut1929 | 2276 | 2340 | 2270 | 2307 | 2434 | 2428 | 2435 | 3148 | 2511 | 2404 |
| 2666 | rrnAC3104 | 2175 | 2365 | 2295 | 2337 | 2415 | 2391 | 2486 | 2511 | 3152 | 2569 |
| 2666 | NP0936A | 2178 | 2380 | 2340 | 2252 | 2414 | 2343 | 2455 | 2404 | 2569 | 3148 |
621 symbols consensus ----------------------------------------------------------MG #oth 111111111111111111111111111111111111111111111111111111111115 Hbo3442 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::-- VNG2471 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::E hla1022 MAGKIHRVTSGRKYYNRPTRLSNRLTVRTTIYIRIRLPDTGNTYRTEGVLVLGTQIRV:: HQ3427A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0109 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::-- Hbo1387 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2630 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::S Hut1929 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::T rrnAC3104 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0936A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::-M consensus VQEQ--YPLDVEAIREDFPILDREVGG------------TPLVYLDNAATSQTPEQVVDA #oth 55141134411432.31....3.31213333112322133211...1...11..43.213 Hbo3442 MH:-::---:IA:::D:::::S:S::D::::::::::::EQ:::::::::T::::::Y:V VNG2471 AT::::G:I::::V:A:::::E:::A:G:::::::::::ED::::::::::H:::P:::: hla1022 ::::::::F::::V:A:::::::L:::DPESPGEGPGDD:::::::S:::::::DP:::T HQ3427A T:::KA::I:IPSV:G:::::::K:::NIETPGPSPDDTD::I:::::::::::TD:::: HVO_0109 :::S::::V::D:::A:::::E:K:::DISTPGEHDDDT::::::::::::H:::::::: Hbo1387 :::S::::I::AT::::::::::K:::DFTVPGEGDGDSL::::::::::T:::K::::: Hmu2630 HS:T::EA::::S::DE:::::::FD::::::::::::::::::::::::::::D::I:S Hut1929 AR:T::GD:::S:::::::::E::FD::::::::::::::::::::::::T:::QR:I:: rrnAC3104 HA:S::EV::::RL:::::::Q::F::::::::::::::EQV::::::::T::::P::ET NP0936A S:QA::E::N:::::::::::Q::FDD:::::::::::::Q:::::::::T::::P::ET consensus IADYYRGYNANVHRGIHQLSQEASVAYEEAHDRVAEFIGASGGREEIVFTKNTTESMNLV #oth 2421.441.1.....1.3..1...1...3...22.2.1.1212.1.31..1....13.1. Hbo3442 FEEF:A:::::::::::T::H::::::::::::L::::::::::::LI::::::::I::: VNG2471 ::::::R::S:::::L:E::::::::::D:::KL:A:V:GE-D:::M::::::::AE::: hla1022 :V::::::::::::::::::::::::::::::T::D:::::-:::::::::::::A:::: HQ3427A LTE::YQ::S:::::::H::::::::::V:::::::::::D-:::::I:::::::::::: HVO_0109 :V:::H:::S:::::::H::::::::::D:::::::::::::::::V::::::::::::: Hbo1387 :VE::Y:::S:::::::H::::::::::N::::::::::::-:::::::::::::A:::: Hmu2630 :SH:::H::::::::L::::::::I:::::::::::::::::::K:V:::::::::::T: Hut1929 :SE::ET::::::::L:H:::::::::::::::M::::::::::::LI::G:::::E::: rrnAC3104 ::::::TT:::::::L::::::::::::D:::::::::::::E:::::::::::::E::: NP0936A ::::::R:::::::::::::::::I:::::::::::::::::::::VI::::::::V::: consensus AYAWGLNELGPGDEVVLTEMEHHASLVTWQQIAKRTGAEVRYIRVDDDGRLDMDHAAELI #oth .111..3..1.1.41.211.....2......1112...4121121111.4..111.312. Hbo3442 ::GV:::::::::N::T::::::::::::::V::::::D::F:::::::K::LE:::::: VNG2471 :F::::::::::::::::Q::::::::::::V:DE:::::K::PIT:::H::::A::DM: hla1022 ::::::E::::::N:::SQ:::::::::::::G:::::D::F:E:T:E:::::E:::::: HQ3427A ::::::A::E:::T:::S::::::::::::::::::::N:E:::::E::Y:::E::R::: HVO_0109 ::::::D::::::S::M:::::::::::::::::K::::::::::::::::::E::K::: Hbo1387 ::::::E::E:::K::::::::::::::::::::K:::S:E:::::E::::::::::D:: Hmu2630 ::::::A:::::::::::::::::A:::::::::K:::T:KFVE::E:::::::::R::: Hut1929 ::::::::::::::::::::::::::::::::::::::T:::::::E::H::::::T::: rrnAC3104 :::::::::::E::::::::::::::::::::::K:::TC::::::E::T::::::R:I: NP0936A ::::::E:::::::I:::::::::N::::::::::::::CK::PIT:E::::::A:R::: consensus DDDTAMVSVVHVSNTLGTVNPVSELADIAHDHDAYIFVDGAQSVPTRPVDVEAIDADFFA #oth 232131122..1..1...11.13..1221.231222.2.1..11.213...32212..2. Hbo3442 :N::QLM:I:::::V:::::::E::TEL::EQ::LV:I::::A::N:R::::E:::::Y: VNG2471 T::::L:NA::I::::::::::G:::::::::G:::::::::AA:::A:::QE:::::Y: hla1022 ::::Q:::::::::::::I::I:::::L:::::::V:A:::::::::::::DDLGV::L: HQ3427A ::SI:::::::I:::::::T::E:::ELT:::GG:::I:::::A:::::::D:M:T:::: HVO_0109 ::S:K::::::::::::::::::::::M::EVGS::::::::::::::::::D::::::: Hbo1387 :E::K::::::I:::::::::::::::M::EVGS:::::::::::::::::TD::::::: Hmu2630 T:::E::::::::::::::::::::::::::::SL::::::::::HM::::::::::::: Hut1929 GP::::::::::::::::I:::A::::L::AE::F:::::::A::N::::::::::::Y: rrnAC3104 T::::::::::::::::::::::::::::::::S:::::::::::N::::::::::::L: NP0936A T:E:E::AA:::::::::::::::::A::::::::M:::A:::::N:S::::::::::L: consensus FSGHKMCGPTGIGVLYGKQHILEEMEPYLYGGEMIRRVTYEDSTWNDLPWKFEAGTPVIA #oth ......2....1.2...1431.2313.11...2..43.112.12.221...1.....3.2 Hbo3442 ::::::A::::V:C::::H:L::S:::F::::::::H:::::::::RP:::::::::P:: VNG2471 ::::::L::::::C::::R:L:A::::F::::D::E::S:::A::::P:::::::::::: hla1022 :::::::::::::A:::REE::D:VQ::::::D:::::SFT::::E:::::::::::S:: HQ3427A ::::::L::::::::::::E:::S:::::::::::::::::::::E:::::::::::::: HVO_0109 :::::::::::::A::::RD::D::G::::::::::S::::::::E:::::::::::P:: Hbo1387 ::::::L:::::::::::EE:::::T::::::::::::::D::::E:::::::::::::E Hmu2630 :::::::::::V::::::E:L:DA:Q::::::M::EK::F:::::HE::::::::::::S Hut1929 ::::::A::::::A:::::A:::H:::FN:::D::TK:::::A:::E::::::::::K:: rrnAC3104 ::::::A:::::::::::K::::::::::::::::KK::F::AS:::::::::::::::: NP0936A :::::::::::::::::::::::S:::::::::::LK::F:::K::E::::Y:::::::S consensus QGIALAAACDYLDDIGMERVQAHEEELAEYAYDRLTEFDDVEIYGPP-GDDRGGLVAFNL #oth 1111111.31..231.1241421144.12.1222.435111121..23.42.211.1.12 Hbo3442 E:::::::A:::::V::DF:EER:N:::Q::LE::::R::::V::::L:EA:S::::::: VNG2471 ::::::E:V:::Q::::DAIR::::A:T:::::Q::MT:::DV::::::::::AV:S::V hla1022 ::::F:::IE::EE:::QN:::::DL:::::::E::DLGG:::::::::N:::::::::V HQ3427A :A:G:H::I:::E:::::T::::::L::::::NQ:SA:::::T::::::G:::::::::: HVO_0109 ::VGF:::V:::::::::N::::::L::::::::::::::I:::::::::::::::S::: Hbo1387 :::::H::I::::E::::N::::::R::A::::::A::::I:::::::::E::::::::: Hmu2630 E:::::E::::::S::::::HR:GT:::A::::::Q::::I::L::G:::E:AA::S:DM Hut1929 ::::::E:A::::E::LDAIAR::N:::Q::I:::S::::I:::::SA:EE:::::S::: rrnAC3104 ::::::E::::::N:::::I:R:::Q::Q:TLEQ:R:EG:::T:::SV:TE:::::S::: NP0936A ::::::E::::::::::D:IER::AR:::::::::::H::::V::::::::::::::::V consensus DGVHAHDLSSILNDYGVAIRAGDHCTQPLHDKLGVAASARASFYIYNTREEVDKLVDAVD #oth 121.1..1.21.12511.1............421231.2.....2..142.1.4.24.21 Hbo3442 ::::G::::AL:DER:I:V::::::::::::R:DIPG:V:::::V:::TD:I:Q:L::L: VNG2471 ::I::::::::::::::::::::::::::::T:::P::::::::L::::D:::A::A::: hla1022 E::::::::::::::::::::::::::::::E::::::::::::L:::V::I:A::E::G HQ3427A E::::::::::::E::::::::::::::::::I::P::T::::::::::::I:E::T::: HVO_0109 :S:::::::::::EQ:::::::::::::::::::::::T::::::::A::::::::::I: Hbo1387 ::::::::::::::HA::V::::::::::::::DI:::T:::::V:::YD:::::IE::: Hmu2630 :N:::::V:E:::AN:::V::::::::::::::::S::T::::::::::::::A::::L: Hut1929 ES:::::::::::::A::::::::::::::::::::::::::::L::::D:I:V:I::I: rrnAC3104 :S::::::::::::SA::::::::::::::::M::P::::::::::::::::::::S:I: NP0936A :S::::::::::::SA:::::::::::::::V::AT::::::::::::KT::::::E::: consensus DARQLFA----------------------------------------------------- #oth 4..321321111111111111111111111111111111111111111111111111111 Hbo3442 V::DELDSHLASEQYHDLVYEHYRNPQNTGGLSNPTFTKHSEETSCGDDGEFHVDVAEDG VNG2471 E:::I::P:::::::::::::::::::::::::::::::::::::::::::::::::::: hla1022 E::D:::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3427A A::E:::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0109 A::E:::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1387 :::T:::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2630 Q::E:::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1929 ::::::G::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3104 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0936A ::::::S::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hbo3442 TIENIAFESESCAVSSAVASMLSERLEGMSLEEVAELDGFVDEVLDGTYPDIRRDCVVGP VNG2471 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1022 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3427A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0109 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1387 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2630 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1929 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3104 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0936A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------------- #oth 111111111111111111111 Hbo3442 EEVICEAAREQMDGSNGRAVL VNG2471 ::::::::::::::::::::: hla1022 ::::::::::::::::::::: HQ3427A ::::::::::::::::::::: HVO_0109 ::::::::::::::::::::: Hbo1387 ::::::::::::::::::::: Hmu2630 ::::::::::::::::::::: Hut1929 ::::::::::::::::::::: rrnAC3104 ::::::::::::::::::::: NP0936A :::::::::::::::::::::