|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1733 | NP2272A | hla0889 | VNG2015 | HQ1098A | HVO_1866 | Hbo1740 | Hmu2579 | Hut2682 | rrnAC3174 |
1200 | NP2272A | 1640 | 995 | 1098 | 977 | 1064 | 1004 | 1045 | 1044 | 1065 |
1244 | hla0889 | 995 | 1757 | 1141 | 1097 | 1180 | 1185 | 1082 | 1042 | 1045 |
1440 | VNG2015 | 1098 | 1141 | 1782 | 1151 | 1297 | 1202 | 1160 | 1160 | 1158 |
1309 | HQ1098A | 977 | 1097 | 1151 | 1777 | 1339 | 1362 | 1043 | 1025 | 1053 |
1452 | HVO_1866 | 1064 | 1180 | 1297 | 1339 | 1755 | 1460 | 1110 | 1078 | 1102 |
1387 | Hbo1740 | 1004 | 1185 | 1202 | 1362 | 1460 | 1766 | 1070 | 1014 | 1089 |
1278 | Hmu2579 | 1045 | 1082 | 1160 | 1043 | 1110 | 1070 | 1743 | 1209 | 1268 |
1271 | Hut2682 | 1044 | 1042 | 1160 | 1025 | 1078 | 1014 | 1209 | 1672 | 1224 |
1311 | rrnAC3174 | 1065 | 1045 | 1158 | 1053 | 1102 | 1089 | 1268 | 1224 | 1669 |
242 symbols consensus MRVVVSIGGSVLAPDLDADRVEAHADVIETLAAAGHEIGAVVGGGGVARDYIGTARDLGA #oth .1111.1.......2.11211331.51244.333.32213.1...31..2..32..2.1. NP2272A ::II::::::::::::E:G:::::::A:DS:V:D:::VA::::::D:::Q::DS:::::: hla0889 :::::::::::::::::P:::A:Y:EA::R:::D:C:V:V:::::::::E::E:::E::: VNG2015 ::::::::::::::G::::Q:D::::A:NE:TD::C:V::::::::::::::::::E::: HQ1098A ::::::::::::::N:::R:::D::A:V::::E::YD:A::::::::::::::::::::: HVO_1866 ::::I:::::::::::::R:::G::S:V::::RD:C:::::::::::::::::A:::::: Hbo1740 ::::::::::::::::::R:::D::::::H::RE:V:L::::::::::::::TA:::::: Hmu2579 :K::::V:::::::N:EP::IGEY:R:::::DE::::::I:::::PT::E::T::::::: Hut2682 :KI::::::::::::::::::AGY:G:LGE:D::::D::V:T:::S:::E::E:::A:D: rrnAC3174 :K:::::::::::::::::::ADY::A:QS:D:Q::TL:T:::::PT::::::S:::::: consensus NEVELDQIGIDVTRLNARLLIAALGSRAAPKPAEDYEDARAAIRRGDISVMGGVVPGQTT #oth 1.32..31.121..1.2...11..3461314114311212213...11211..22111.. NP2272A T:YD::AL::::::::::::VT::N:S:I:E:::SH:::::SM:::EVA::::T:::H:: hla0889 :::::::L::GT::::::::::::AGG:NLS::TG:DE:A::L:::EV::::::T::::: VNG2015 ::I:::D::V:::::::::::::::GD:::S::::::::GE:M:::::A::::::A:::: HQ1098A :::Q::::::::::I::::::::::::VD::V:R:::::GD:V::::::I:::IM::::: HVO_1866 :::Q::::::::::I:::::::::::QVD::V:H:::::GD:::::::::::::M::::: Hbo1740 :::Q::::::::::I::::::::::PKVD::V:H:::G:GD:::::::::::::M::::: Hmu2579 ::I::::L::A:::::S::::::::EA:::A:V:S:DEG:::L::::VP::::T:A:::: Hut2682 ::M:::H:::A::::::::::::::E::::E::AT::EG:E:L:::::P:L::T:A:::: rrnAC3174 ::I::::L::A:::::G:::::::DD::::T:::S:DEG:E:::::::P:L::I:AA::: consensus DAVAAALAEYVDADLLVYATSVPGVFDADPNEDDDATRFEELTAGELVDVIADIEMNAGS #oth ...1.11..313....2....12..12...22122.2313425241...21331122..1 NP2272A :::::M:::M:E::::I:::::::::S::::::PS:E::DR:E:SK:::::SS::TT::: hla0889 ::::::F::S:::::::::::AN::Y:::::V:::::Q:GSMSPA::::IVLPMSR:::A VNG2015 :::S::::::T:::::L:::::::::S::::::A::EH:TRM:::::::I:::::::::: HQ1098A ::::::::::::::::::::::D::Y::::SSQ:E:QKYTQ:LPT:::::V:PMSRD::A HVO_1866 ::::::::::::::::::::::D:::S::::S:P:::K:::M::A::::::G:::::::: Hbo1740 ::::::::::::::::I::::AD::::::::V::::::Y:::S:SK::::::PMSRD::A Hmu2579 :::S:::::H:G::::::::::::::S:::::::::E:Y::IA::::::L::G::::::: Hut2682 :::S::F::::N::::::::::::::::::AV:P::::::T::V:::::::::::::::: rrnAC3174 ::::::F::::G:::::::::::::YN::::::::::::D::G:D:::::::::::D::: consensus SAPVDLLAAKLIERSGIRTIVLDGTDPERIVDAVLDGEHDGTDIIPEG-DDEPTYWA--- #oth 1.........2.2.123.21....22.44164.1341224.1112.44454434314643 NP2272A N:::::::::V:::::L:A::::::A::::A:::-::DPV::EVL:NE:--------::: hla0889 ::::::::::::D:A:::S::::::N::VV:::::R:D:T:::V::T::SE::I::TGSS VNG2015 ::::::::::::::::V::::::::::R::::::RF:::::::V::D:T:NQM::::DNQ HQ1098A ::::::::::::Q:A:M:::::::A::QH:ES:::::::N::::::PDGK:DLAT:VHAE HVO_1866 ::::::::::::::AKM::::::::::D::TP:::R:::T:::::::::G:::::::P:: Hbo1740 :::::::::::::::RM:::::::::::S:KQ:A:H:::S::::::::T::::S:::QR: Hmu2579 N:::::::::I:::A:L:S::::::::TAVRR::ET:::::::VV::NLGAA::A:DRA: Hut2682 N:::::::::::::::::A:::::S::Q:VL:::E:DA::::E:V:NDVE-------::: rrnAC3174 ::::::::::I:Q::::::M:::::::::V:R::E:::F::SE:L::A:--------::: consensus -- #oth 31 NP2272A :: hla0889 DA VNG2015 E: HQ1098A Q: HVO_1866 :: Hbo1740 :: Hmu2579 :: Hut2682 :: rrnAC3174 ::