| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5210 | NP0646A | NP4372A | rrnAC1651 | Hut0386 | HQ3634A | VNG1240 | Hmu3116 | hla0609 | HQ1950A |
| 2849 | NP0646A | 5794 | 2132 | 2308 | 2284 | 2229 | 2397 | 2283 | 1466 | 1543 |
| 2977 | NP4372A | 2132 | 5569 | 2384 | 2288 | 2326 | 2564 | 2460 | 1588 | 1610 |
| 3466 | rrnAC1651 | 2308 | 2384 | 5352 | 2963 | 2740 | 2880 | 2806 | 1747 | 1784 |
| 3377 | Hut0386 | 2284 | 2288 | 2963 | 5305 | 2676 | 2964 | 2804 | 1698 | 1852 |
| 3711 | HQ3634A | 2229 | 2326 | 2740 | 2676 | 5288 | 3483 | 3429 | 1703 | 1813 |
| 4119 | VNG1240 | 2397 | 2564 | 2880 | 2964 | 3483 | 5354 | 3611 | 1670 | 1879 |
| 3941 | Hmu3116 | 2283 | 2460 | 2806 | 2804 | 3429 | 3611 | 5264 | 1659 | 1900 |
| 1947 | hla0609 | 1466 | 1588 | 1747 | 1698 | 1703 | 1670 | 1659 | 3356 | 2069 |
| 2104 | HQ1950A | 1543 | 1610 | 1784 | 1852 | 1813 | 1879 | 1900 | 2069 | 3259 |
813 symbols consensus -MMKDLERDLGLPSVVAISIGAMIGSGIFILPALA-LKKAGPAVILAYLLAGLLVVPAAL #oth 12534.2.....63231113...1.1.1.1..12113261.12112.131.12211.1.. NP0646A ::PT::K::::::ETT::A::::V::::::::GI:Y:EAG::S:VA:F:V:AV:I::::: NP4372A ::T:::::::::V::::::T:::::::::V::GI::MNE:::S::::FA::AV::::::: rrnAC1651 ::A:::::::::L::::::::::V::::::::::::V:D::AGI:A::::::V::L:::: Hut0386 ::P:E:::::::F::L:::::::V:::::::::::::EM:::::::::V::A:I:L:::: HQ3634A :-::K:::::::S::L:::V:::::::V:::::::::EI::::::V::A:::V::::::: VNG1240 :-::T:::::::GA:F:::V::::::::::::::::::M::::::V:::::::::::::: Hmu3116 :-::Q::::::::T:L:::V::::::::::::::::::T:::S:V:::::::I::::::: hla0609 MSDGE:S:::::Y:A:TL:M:::::G:::V:::VG:Y::::::I:V:::::::I:L:N:: HQ1950A ::KN::::::::YAT:T::M:::::::::V::::G:::::::::::::I::::V:L:::: consensus SKAEMATAMPEAGGTYIYIERGMGPLLGTIAGIGTWFSLSFKGALALVGGVPYLLLL--- #oth .21.11....12..2.2111.21..12..11.2.3.12.3..121....122..242111 NP0646A :AS::::::::D::S:V:V:::::::::::::L:N::M::::::::::::::::VYVAPA NP4372A :I::LG::::D:::D:VF::::I::AA:::::L:::LM:M::::::::::MF::DV:::: rrnAC1651 ::::::::::::::::V::::S:::::::VS:L:::::::::::::::::::::V::::: Hut0386 ::::::::::::::::L::::::::::::::::::::A:::::::::::::::::WY::: HQ3634A ::S:::::::::::::::::::::::::::::V::::::::::::::::::::::::::: VNG1240 ::S::::::::::::::::::::::::::V::V:::::::::S:::::::::::V::::: Hmu3116 ::S:::::::::::::L:::::::::F::V::V::::::A:::G:::::::::::I:::: hla0609 :::::::::::D:::::::D:A::::F:::::::V::::V::S:F::::LGA:::::::: HQ1950A :::::::::::S::::L::D:A::::A:::::::A::::V::SSF::::LGA:::::::: consensus -----FDLP---VKPVALGLAAVLILVNLLGAKQTGRLQIVIVVVMLAALGWFVAGSGGS #oth 1111124124323432.2311233112.1312221.22.542.44224223211432367 NP0646A IADATVPIVGDP:IAL::AI:TGF:VL::VSTSS:::::FF::G::VVVM:A::LLG:RH NP4372A :::::VQ::S::HAAA:VVIGT::::I::F:V::::Q::SIM:::LIVI:SV::IATITR rrnAC1651 ::::::::::::IR:::IT:::::::::I:::E:::::::G::A:::V:I::::::G:PA Hut0386 ::::::E:::::I:::::V::::::::::::::::::::VG::AI::::MI:::G::A:: HQ3634A ::::::::::::L:::::::::::::I:IA::::::::::::::I::::::::A:::ASG VNG1240 :::::::::::::Q::::::::L::V:::::::::::::T:::SL::G:::::::::A:Q Hmu3116 :::::::::::::::::::::::::::::::::::::::VA:::::::::S:::V::::: hla0609 :::::VSI:ATL::V:::V:GVIV::L:IV:TEKS:QV:G:L:TFVVLV::AY:V:GVVP HQ1950A :::::IPISDGLI:I:::::::LIVVL:IV:TE:S:KA:SI::TAVVF::AAY:LN::FI consensus VDSANFQGFLADGAGGILAATGLVFVSYAGVTKIASVAEEVENPDRNIPLGILGSLAFTT #oth 244242522536.631242.122.11.1..1211.11...122.1.11.21222.23212 NP0646A ::P:QTD:LT:V:E:NF::::A:::I:::::I:::A:::::KD:G:V::QAM::::LV:: NP4372A ::G:QYEP:FD::YS:LI:::TT:L::::::::::A::::I:::G::L:::LF:::IL:A rrnAC1651 :NT:TYG:MWEY:VE::F:::::::::F::::::::I:::::D:::V::::M:::::::: Hut0386 IQ::S:D::::S::::::E:::F:::::::::::::::::I:D:::V::R:MIW::G::: HQ3634A :T:::YAS:F:::I::L::::::::::::::::V::::::::K:G::::::::::::::: VNG1240 :QQ:::::::TG:WE:L::::::::::::::::V:::::::::::::L:::::::::::: Hmu3116 :QQ::::P:Y:::LS:L::::::::::::::::V:::::::::::::::::::::::::: hla0609 S::VQYTP:VTR:I:::AT::AF:::::::IGEV::::::ITD:G::::RAM:I:IGVMM HQ1950A IEPTR::::T:K::D::VT:AAF:::::::::::::::::I::::::L:::::I:MGVMM consensus LLYVLVVAVIVGVTDADAL-------A-GSATPMADAADATLGTAGVA------------ #oth 21.231.5141.241445323312322131521213312334134..5111111111111 NP0646A :::::::Y:AI:IV:V::AIGQGLLA:D:EGAI::I:::QAI::V::I:::::::::::: NP4372A F::I:I:F:L:::V:PAQ::::::::::D:NI::V::V::V-:W:::WVLDSAQLLFIAV rrnAC1651 :::::::::V:::IPL:Q::::::::::::T::I::::E::::::::::::::::::::: Hut0386 :::::::I:::::DPSGIV:::::::-:::N::V::V:E::MS:P::::::::::::::: HQ3634A V:::VI:T:LI::::LTSI:::::::::::V::V:V::ES:::EF::I:::::::::::: VNG1240 ::::GI:::M:::::SG:V::::::::::::::V:V:::::::::::Y:::::::::::: Hmu3116 :::::I::I:::::::GVV::::::::::::::V:E::A::::EW::W:::::::::::: hla0609 VI:TA::G::::IVP::T:IHGGPDGG:T:L:::::S:EMVF:GV::T:::::::::::: HQ1950A :::T:::::V::LN:PNV:TTSGPNGG:P:L:::::G::QL::GF::V:::::::::::: consensus -AVVLAAILALISTANAGILSSSRYPFAMSRDDLAPDQLATVSDRFGTPVTAILLTGGVL #oth 121332.3...3.1....2.32..111..1..4.2.34224124..3..331132..322 NP0646A :::TV::L:::A::::::L::A::F::::A::::::SAF::::E::::::L:VAT::A:M NP4372A A:I::::::::V::::::V:TA::::L:::::::L:::F:H:HS::R::T::::V:::AM rrnAC1651 :::::::::::V::::::::::::::::::::G::::L:S:::::::::::::T:::::M Hut0386 ::::I::M::::::::::L:::::::::::::::::PTF:A::::::::::::A:::L:M HQ3634A :I:I::::::::::::::::::::::::::::K:::PS:S:::E::::::FS:T:::A:: VNG1240 :::IA::V:::V::::::::::::::::::::Q:::PTF:EIH::::::T:::T:::A:V Hmu3116 :::::::::::::::::::::::::::::A::G:V:TS::E::E:::::SLS:S:::I:: hla0609 :V:AIT:V:::T:M::::V:GT::FLL:::::S:L:::VGRINH::L:::N:V:V::::: HQ1950A ::IA:I:::::T:M::::V:A:::F:L:::::S:::T::::::K::S::RNS::::::L: consensus LALIAFVPILDIAKLASAFQILVFVLINLALIAFREGDLD-YDPSFESPLYPWMQIFGVL #oth .32.221.1442..111..2...1412121212..135535.4.2152.1..22142.44 NP0646A :VM::YL::DQV:::G::::::::I:V::::VG::::A:EE:N:E:V::::::::L::MA NP4372A :FI:VAL:VE::::T:G::::::YA:VCAS::::::RP:EW:::D:HA:G:::V::::IV rrnAC1651 :L::L:::::E::::::::K::::A:::V:::G:::S:APD::::::V:::::TP:::T: Hut0386 :::::::::MS:::::::::::::::::V:::::::S:IA:::::YK::::::::G:::: HQ3634A :V::::::::::::::::::::::G:::::VV:::::STE::K:E:T:::::::::::TI VNG1240 ::::::::::::::::::::::::::V::::V:::T:TT:::::D::::::::::G:::: Hmu3116 ::::::::V:E:::::::::::::::::V:IV:::::EG:::E::::::::::::VA::: hla0609 ::::::::VVNL:::::::L::::S:E::SV:V:::A:V:F:N:D:R::G::AV::L::V HQ1950A ::::::::VVEL::::::::::::SFV:V:::V::TSEV:S:Q:::K::G::YV:FA:FF consensus SGLALLTQMGLIPIVGAVGITVGSVGWYLAYARPRVDREGAATDAVRRRIGRRALDETE- #oth 2.34212.11432241.2213331231.45.213214.2.12534323552345352123 NP0646A ::FVV:::I::F:FAA::AV:GV::VY:Y::::H::::::::RTG::KEV:D::IER::E NP4372A :::YIIS::D:L:Q::::::::FGLA:::W:::SK:::::V:V::A::QA::QFVS:::S rrnAC1651 T:F:::::::::A:::::::VIA::V:::G:V::::T::::IKES:::S::D::::R::E Hut0386 G::V:::::::::F:::IV:IL::::::F:::HRN:S::::L:::I::GMD:::V:::RS HQ3634A T::L::::::SVA:G:::V:I:::I::::L:V:S::S::::::::::::V:EDI:I:::: VNG1240 ::::::::::WV::A::AV::L:::V::RV::::::R:::::::V::::L::DV:T:::A Hmu3116 ::TV::::::PVA:::::V::::::L::VL::::N:E:Q:::A:::GQG::DALI::::: hla0609 G:VI:II:::::S:I:::::S::::A:::::::::T::R:VL-----------------: HQ1950A G:::::::::MF::L::A::I::GI::::I:G:S:T:::::L-----------------: consensus ----S-ADAAEYEVLVALTREASRDREAALLRVAADLARPRDGRVVAVRFDEVPDQTPLD #oth 221157534546331212354434652552253223432563353421412321126325 NP0646A ::::LF::DRT:DA:::I:D:T:EPGARDM:::::::S:LGSTH:S::::S:T:QHVFGG NP4372A RL::DE:TTDGD:I:I::RQD:::LE:NR::Q:::PV:QT:GSQIRV:::::::::Y::: rrnAC1651 ::::TLDET::TS:::::PEG:::QS::T::E:G:A:S-:T:SSLSV:Q:::::::Q::: Hut0386 ::::VCH::D:SD::::::EDTTAAA:ER::D::IPI::A:::T:TV:Q::Q:::::::S HQ3634A :::::MI:DSPR:::::::KNLDS:::QS:ISI::::V::D:::::::::E::::::::T VNG1240 LVDATG:E:GGP:::::::::::A:::R:::SL:::R::NE::Q::V:::::::::A::: Hmu3116 :::::AMEN:P::::::I:::MD:E:::::::I::::V::H:::::::W:E:::::MD:E hla0609 ::::-:----------------------------------------:TY::R:::----- HQ1950A ::::-:----------------------------------------G:ILEKQQ:----- consensus HASDVQSPAD---IEFEERTD-------------------------------DLAAAADV #oth 526533343111146223234111111111111111111111111111111151345442 NP0646A ::P::AQAD:PDWLP:D::PEWLAAATRAGGGPEQSSITAGSLPQTDTATEAT:E:::GT NP4372A Q:TG-:T:S::::::::::::::::::::::::::::::::::::::::::::::DQY:: rrnAC1651 Y::G::::D::::L:::C::::::::::::::::::::::::::::::::::T::::L:T Hut0386 Y:ESTL:T:::::KA:::::A:::::::::::::::::::::::::::::::A::RD:S: HQ3634A ENIAM::SS:::::SY:S:IN:::::::::::::::::::::::::::::::S:S:KF:: VNG1240 ::A::::::::::VR:::::E:::::::::::::::::::::::::::::::G:STEF:: Hmu3116 T::ET::::::::VQ:::Q::::::::::::::::::::::::::::::::::::DDLN: hla0609 ----------:::--------:::::::::::::::::::::::::::::::-------- HQ1950A ----------:::--------:::::::::::::::::::::::::::::::-------- consensus DVEYGEIVSHDTKRAVVNFAD-RGVDLIVAEHERLRLRSRLLG-DPIDWVVRHAPCDVLL #oth 323331332334431242424732215334344464354423213343335553322234 NP0646A A:D:R:VTAENVRQ:::D::TFE:Y::LLL:RR:EDFHR::F:VGDTE:FL:N:::G::: NP4372A :I:V:::::::::H::::Y:ER::::::ITRSDPVSRLRT:F::RDS::IME::::::VF rrnAC1651 P:::::L:::HPE:::A:AV:E::::VLLV:R-GASFEDS:::::S::RIRKQ:D::TIA Hut0386 P::::::::::ID:::E:V::LH:Y::V:VDESGPTFSEN:SD:---VIFGPTRSF:::G HQ3634A :I:AD::::::::H:::::::N::::S::T:::P::::::V:D:::::::::YS:::::: VNG1240 :IA:::V::::::::IL:V:EQ:S::TV:::::::::::::::::::::::::::::::: Hmu3116 A:DA:::::::::H:I::::RH::::A::::::HR:::::::::::V::::D:::::::: hla0609 ---------------------:---------------------:---------------- HQ1950A ----::VA:S:----------:---------------------:---------------- consensus VDNRGYDAPERIALVDDGGPY-DPLKVAVADAIATANGARITLLFPLDEDATDERREAI- #oth 134543254453334442222131533533333143334436245345455454544645 NP0646A :ED::F:GADE::V:ASR:A::::::LL::::::EET:::::::QAVP:A:PEQ:::::E NP4372A :QPGAF:SLSEL:I:T:RS:FN::::IEL:::::GVA::NLRFV:AAGD:PSEQYL:T:Q rrnAC1651 ::AQPL::L:T:T:ITTR:::::::::R:GN:V:::T:TDLQF:Y::::RQSA:E:QQLE Hut0386 :EAESL:DID::::::::::F:::E::RI:NLL::::D:T:E:VHGIEP:::P:::DSVD HQ3634A :::L::NR::QVV:SGG:::::P:PA:N::E::::::KSD:S:WY:A:PNE::KY:Q::N VNG1240 :E:::::::QNVV:EG::::::::AT::::::V:G:A:GTV::Q:::SA:HP:K:Q:TVH Hmu3116 :::::::R:::::VE:::::F:H:NT::IT:TL:AE::G:VVF----SAGEGS:NGPGV: hla0609 ---------------------:--------------------::E::::AP:SSKQ:ED: HQ1950A ---------------------:-------------------------------------: consensus DYHDELADLLSVPVE---V-ADDGDALA-----PDMVVRRGA--R-L---LRNRRGD--- #oth 413441554252233555444224645554324325443544652234453444454345 NP0646A :::AA:ISI:T::AQSRVIE:::RV:GLARFAE:ADLLVT:TEA:GFGGE:LG:PD:RLV NP4372A ::::::DNRCYA:::GVV:KS::T:::VESLAGA:::MLSTVTH:R:PDL:FAQ:S:RVA rrnAC1651 A:::D:L::CD::T:RTF:DR::LS:AMDA:ADN:RTLLIH:SNGG:SARTS:DN:TTQS Hut0386 R::A:::::C:A:T:SAI:EG::TA::VRATDDA:V::VADT::-:VGAV::DGP::::A HQ3634A ::RIA:SEM:P:S:QVESPR::G:RPSN:::::::V:::::NVE:::RSV:S:DTLI::F VNG1240 A:Q::::G:::A::RTADLR::G::QT::::::::L:::T::HR::-:::V:GG::SHTQ Hmu3116 T:REQ:::::::::-:::-:SEG:TET:QT::R:::RI::::DH:::RGS:FD::P:::: hla0609 ---------------:::-:--------:::::---------::-:-:::-------::: HQ1950A ---------------:::-:--------:::::---------::-:-:::-------::: consensus AAADCTAITVHPHESRQPG-LLRRLLERLVF-- #oth 656343545344555334323434353135211 NP0646A DSV::::VM:Q:ESE:RV:F:K:AV:D::F-:: NP4372A :RL:QPV:L::SQK::RTT:F:EPIID:VL:RS rrnAC1651 :IQ:SNHASMEVDTK:H::GVVG::::::A::: Hut0386 V:KRGN:LVL::GSDG:::::IG::VQ:V:Y:: HQ3634A PRPG::T:::Y::NAG:SR::I:W:F:::T::: VNG1240 T:::::EL::Y::::::::::::::A::::::: Hmu3116 GP::S:E::::A:::E:::::::::F::I:::: hla0609 -------------------:-----------:: HQ1950A -------------------:-----------::