|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2286 | HQ1879A | VNG6309 | hla1963 | HVO_1454 | Hbo0098 | Hmu1563 | Hut1214 | rrnAC1225 | NP3518A |
1818 | HQ1879A | 2294 | 1703 | 1727 | 1804 | 1849 | 1657 | 1627 | 1669 | 1785 |
1952 | VNG6309 | 1703 | 2568 | 1692 | 1846 | 1792 | 1786 | 1744 | 1834 | 1813 |
1919 | hla1963 | 1727 | 1692 | 2357 | 1889 | 1839 | 1789 | 1693 | 1712 | 1776 |
2056 | HVO_1454 | 1804 | 1846 | 1889 | 2294 | 2039 | 1840 | 1850 | 1865 | 1839 |
2025 | Hbo0098 | 1849 | 1792 | 1839 | 2039 | 2293 | 1809 | 1813 | 1857 | 1839 |
1995 | Hmu1563 | 1657 | 1786 | 1789 | 1840 | 1809 | 2278 | 1884 | 1927 | 1826 |
1939 | Hut1214 | 1627 | 1744 | 1693 | 1850 | 1813 | 1884 | 2288 | 1931 | 1839 |
2035 | rrnAC1225 | 1669 | 1834 | 1712 | 1865 | 1857 | 1927 | 1931 | 2292 | 1920 |
1992 | NP3518A | 1785 | 1813 | 1776 | 1839 | 1839 | 1826 | 1839 | 1920 | 2245 |
345 symbols consensus --------------------------MRQ-----DHLISAKQLSRDDIEAVLDRAAEIAA #oth 1111111111111111111111111111111111..111221...5.1.31..1.12123 HQ1879A :::::::::::::::::::::::::::H:::::::::L:TT::::E:::TI:::::A:EM VNG6309 MLSTDAVETFDQLVVHDRKEDSSHLDR:HRVMDL::I:TS:::::A:::T::::::::D: hla1963 ::::::::::::::::::::::::::::::::::::::T:T::::::::::::::R:V:D HVO_1454 ::::::::::::::::::::::::::::::::::::::::SH:::E::::::::::D:D: Hbo0098 ::::::::::::::::::::::::::::::::::::::::T::::::V::::::::D:D: Hmu1563 ::::::::::::::::::::::::::::::::::::I::::::::R:::::::::::::: Hut1214 ::::::::::::::::::::::::::::H:::::::I::::::::S:::E:::::::::R rrnAC1225 ::::::::::::::::::::::::::::H:::::::I::::::::G:::T:::H::D::: NP3518A ::::::::::::::::::::::::::::H::::::::L:::::::G:::G:::::::::: consensus DPAAFADRHAGTVLGLLFFEPSTRTKMSFDTAMKRLGGDTVDMGSVESSSVKKGESLADT #oth 1.41323213231.1.1........1...2212....13111..3.12..11...1.1.. HQ1879A N:DGWEAQYS::::::C::::::::R::::A:::::::R:I:::::DN::IS:::T:::: VNG6309 ::S:::::YEN::::::::::::::::::::::::::::I::::::D::::::::T:::: hla1963 ::::Y::::::S::A:C::::::::R::::S:A::::MN:IG::D:D::::S:::::S:: HVO_1454 :::::RQ::::K::::C::::::::R::::S:::::::Q:::::P::::::::::T:::: Hbo0098 ::::WRQ:::::::::C::::::::R::::::::::::R:::::P::::::::::::::: Hmu1563 ::S:Y::::E:SL::::::::::::::::SA::::::::I::::T::::::::::::::: Hut1214 ::T::RQ::P:AL::::::::::::::::SASI::::::I::::P::Y:::::::::::: rrnAC1225 ::G::::::SD:L::::::::::::::::T:::::::::I:::::::::::::::::::: NP3518A ::D:V:EK:SDKL:::::::::::::::::::::::::::::::::D::::::::::::: consensus VRVVEGYADALVLRHPSEGAAKMASEFVDVPLINAGDGAGQHPTQTLLDLYTIRENAGLD #oth ...11..2..1.....31.1121.1.1.12.12.1.....1..1.....11.1...2.11 HQ1879A :::IA:::::I:::::::::::L:A::::I:V::::::::::::::::::::M:::V::: VNG6309 :::I::::::::::::NQ:::Q::::::::::L:::::::H::::::::::::::::::E hla1963 :::I:::::::::::::::::TL:A:R:S::VV::::::::::S::::::H:::::H::: HVO_1454 :::::::::::::::::::::T::A:::::::V::::::::::S:::::::::::::::: Hbo0098 :::::::G::I:::::L::::::::::::::V:::::::::::::::::::::::::::: Hmu1563 :::::::::::::::::::::Q:::::::A::::::::::::::::::::::::::::F: Hut1214 ::::::::::::::::M::S::::::::::::::G::::::::::::::::::::::::: rrnAC1225 :::::::T::::::::M::S::::::::::::V:::::::::::::::::::::::::F: NP3518A :::I:::T::I::::::::SP:L::::::::V:::::::::::::::::M:::::::::: consensus DLTIGIMGDLKYGRTVHSLAHALTNFDASQHFISPESLQLPRNVRYDL-HESGAQVREHT #oth 1111..1............13..131.13...1.....1...2111..1133.241...1 HQ1879A EI:V::A:::::::::::::A::S:::VR::::::::::::::I::::::D::S:::::: VNG6309 :::::::::::::::::::SR::::::VD:::::::::::::D:V:::EQ:::TR::::D hla1963 :::V::::::::::::::::A:::E:::N:::::::::R:::S::F:::::T:::::::: HVO_1454 ::::::::::::::::::::E:::::::::::::::::R:::::::::::A::::::::: Hbo0098 ::::::::::::::::::::E:::::::R:::::::::R:::::::::::G::::::::: Hmu1563 ::S:::::::::::::::::::::V:::R:::V:::::::::S:::::::::::E::::: Hut1214 ::S:::::::::::::::::::::::::::::::::::R::::::::::::E::TI:::: rrnAC1225 ::::::::::::::::::::::::TV::::::::::::::::S::::::::A::GI:::: NP3518A :::::::::::::::::::::::::::V::::::::::::::S::::::::::::::::: consensus DLDDVLPELDVLYVTRIQRERFPDENEYRKVAGEYQIDADTLEAAKDDLTVMHPLPRVDE #oth 32241.42..1.......3....1.1..23...1.1213341442522..11......1. HQ1879A :IESI:::::::::::::::::::::::QR:::Q:RV:T:I:SH:DNN:::::::::::: VNG6309 SFE:::::::I:::::::::::::::::Q:::::::LT:TH:::::::::I::::::::: hla1963 ::EG::G:::::::::::K:::::::::HR:::::::::E:::D:P:::::::::::::: HVO_1454 E::E:::::::::::::::::::::::::::::Q::::SE::D::A::::I::::::::: Hbo0098 E:SE:::::::::::::::::::::::::::::Q::::::D:SD:::S:::::::::::: Hmu1563 ::::::S:::::::::::K::::::S::HE:::::::::A:IREHNE::::::::::::: Hut1214 A::T::DS::::::::::E::::E:S:::::::::R:::E:::STR:::::L:::::::: rrnAC1225 E:::I:::::::::::::A::::::S:::E:::Q::::G:::A::::::::::::::::: NP3518A :IES::ET:::::::::::::::::::::Q:::::R::::L::S::::::::::::::S: consensus IAPDVDETDHAQYFEQAHNGVPVRMALLDLLLEGDR--------- #oth .2211.3141.3..2....11........4213756222221111 HQ1879A :::E::T:E::A:::::::::::::::::A:IGRAK::::::::: VNG6309 :::EI:D::::A::::::::::::::::::V:SA:GGVDDE:::: hla1963 :::::::::::T::::::::I::::::::I:::NAEGDEGMEVDR HVO_1454 :S::I:D::::T::::::::I::::::::I::SQ::::::::::: Hbo0098 :::E::::A::K:::::::A:::::::::M:::DN-::::::::: Hmu1563 :DH::::L:G::::Q::::::::::::::MV::ES:::::::::: Hut1214 :DH:::A:S:::::Q:::::::::::::::V:G:ESA:::::::: rrnAC1225 ::H:::::T:::::Q:::::::::::::::M:G::Q::::::::: NP3518A ::A:::::E::T::K::::::::::::::EM:----:::::::::