|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3496 | VNG2459 | NP0096A | hla0043 | HQ3418A | HVO_0123 | Hbo1373 | Hut1962 | rrnAC3124 | Hmu2646 |
2999 | VNG2459 | 3457 | 2797 | 2799 | 2807 | 2864 | 2838 | 2770 | 2778 | 2708 |
3097 | NP0096A | 2797 | 3491 | 2869 | 2888 | 2882 | 2924 | 2831 | 2815 | 2796 |
3115 | hla0043 | 2799 | 2869 | 3617 | 2926 | 2961 | 2917 | 2773 | 2760 | 2725 |
3092 | HQ3418A | 2807 | 2888 | 2926 | 3484 | 2995 | 3076 | 2757 | 2774 | 2711 |
3132 | HVO_0123 | 2864 | 2882 | 2961 | 2995 | 3489 | 3077 | 2789 | 2767 | 2733 |
3152 | Hbo1373 | 2838 | 2924 | 2917 | 3076 | 3077 | 3476 | 2775 | 2768 | 2730 |
3012 | Hut1962 | 2770 | 2831 | 2773 | 2757 | 2789 | 2775 | 3528 | 2893 | 2868 |
3009 | rrnAC3124 | 2778 | 2815 | 2760 | 2774 | 2767 | 2768 | 2893 | 3539 | 3183 |
2954 | Hmu2646 | 2708 | 2796 | 2725 | 2711 | 2733 | 2730 | 2868 | 3183 | 3527 |
495 symbols consensus --------------------MVLDDLGSSLRGSLDKLRGKSRLSEDDVEEIVKEIQRSLL #oth 11111111111111111111....1..1...12..3.1..1111.2.1231.1....... VNG2459 ::::::::::::::::::::::::::::::::T::T::::::I::E::DKV::::::::: NP0096A ::::::::::::::::::::::::::::::::T::::Q::TT:::::::::::::::::: hla0043 MYSATADEQSFTASAAYFRQ:::::::T:::S:::::Q:::::::S:::::::::::::: HQ3418A ::::::::::::::::::::::::N::::::::::::Q:::::D:::::::::::::::: HVO_0123 ::::::::::::::::::::::::N::::::::::::::::::D::::Q::::::::::: Hbo1373 ::::::::::::::::::::::::N::::::::::::Q:::::D::::::::R::::::: Hut1962 ::::::::::::::::::::::::::::::::A::G::::::I::E::QAV::::::::: rrnAC3124 ::::::::::::::::::::::::::::::::T::D:::::::::E:I:D:::::::::: Hmu2646 ::::::::::::::::::::::::::::::::T::D::::::I::E:I:D:::::::::: consensus SADVDVDLVMDLSDSIKTRALEEEPPAGTSARDHVLRIVYEELVDLVGESTELPLEEQTI #oth 1...1.3..11..31.33.113....1..111.1..1.....1.2.1.1..31..13... VNG2459 Q::::::::::::E::TE:S::::::G:::::::::::::::::G:::D::PI::::::: NP0096A ::::::::::::::::RE:::D:::::::T::::::K:::::M:E::::::A:::::::: hla0043 ::::::S:::E:::::::::::::::G::T:K::::K:::::M:E:::D:::::::N::: HQ3418A ::::E:S:::E::S::ED::TG::::::::::::::::::::::::::D::D:::KS::: HVO_0123 ::::::S:::::::::::::::::::G:::::::::K:::::::::I:::::I:::S::: Hbo1373 ::::::N::::::S:::E:::N::::G:::::::::K:::::::G:I::::DI:::P::: Hut1962 Q:::::::::::::::E::::::::::::::::W::::::::::::::::::::::P::: rrnAC3124 Q:::::G::Q:::N::E::::D:::::::TP::W:::::::::::::::::::::::::: Hmu2646 Q:::::G::Q::::G::S:::D:::::::TP::W::::::::::::::::::I:::N::: consensus MLAGLQGSGKTTTAAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPD #oth 2....1......11..1.....1....1.11....2.....1.121.111...2...21. VNG2459 :::::::::::::::::::::::::::::IV::::::::::E::AE:AD::::::::E:: NP0096A V::::::::::::::::::::::::::::::::::::::::::::E:::::::::::N:: hla0043 L:::::::::::S::::::::::::::::::::::::::::::::::::::::::::::: HQ3418A L:::::::::::S:::::::::T:::::::::::::::::::::E::::::::S:::::: HVO_0123 :::::::::::::S:::::::::::::::::::::::::::::::::::::::::::::: Hbo1373 L:::::::::::::::::::::T::::A:::::::::::::::::::::::::E:::::: Hut1962 V:::::::::::S:::I::::::::::::::::::W:::::E::EE:A:::::::::::: rrnAC3124 :::::Y::::::::::::::::T::::::I:::::D:::::::S:E:A:::::::::::: Hmu2646 :::::Y:::::::::::::::::::::::::::::D:::::::S:::ADN:::E::::E: consensus EDDPVKIARDGLEATADADVHIVDTAGRHALEDDLIDEIEEIESAVDPDRNLLVLDAAIG #oth 32.1.3..12.111.21..12.......11.123..211.3.24314..22...1...1. VNG2459 S::::Q::::::A:::::::::::::::::::::::A::::::GV:E:::S::::::::: NP0096A S::::E::ER:::E::::::::::::::::::EA::::L:A::::::::::::::::::: hla0043 N::::A:::E::::::::::::::::::::::::::A::::::R::::::S::::::::: HQ3418A C::::::::E:I:::::::I::::::::::::A:::::::A:D:T:A:::S::::::::: HVO_0123 C::::Q:::E:::::E:::::::::::::::::::::::::::GV:Q::L:::::::::: Hbo1373 :E:::::::::::::E:::I:::::::::::::A::::::D:D:::N:::S::::::::: Hut1962 :::A:::::::::::D::::Q::::::::::::G::::L:D:::VA:::H:::::::::: rrnAC3124 :::::::::::::::EN:::R:::::::DG:NEE::EQ::R::QE:Q:::D:::::::M: Hmu2646 SN:::E:::E::A::E::::R:::::::DG:NEE:::Q::R:GAE:Q:::::::I:::M: consensus QGAKDQARQFEDAIGIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFE #oth .2..3..43.3411..2..21...........1.2..11...1.1...2..1.1.1.... VNG2459 ::::Q:::::DAS:::::::::::::::::::S:::::::::T:::::S::::::::::: NP0096A :::::::ER:H::V::::::::::::::::::::A::DQ::::::::::::E:K:::::: hla0043 ::::E::::::KS:::E::M:::::::::::::::::::::::::::::::::::::::: HQ3418A ::::Q:::E:NN:::::::VV::::::::::::::::::::::::::::::::::V:::: HVO_0123 ::::E::Q::DES:::G::V::::::::::::::::::::::::::::M::::::::::: Hbo1373 ::::::::::D:S:::::::::::::::::::::::::::::::G::::::::::::::: Hut1962 :E::E::SR::::V:::::V::::::::::::::V:::::::T::::::::::K:V:::: rrnAC3124 :S::S::AD::A:::::::V::::::::::::::A:::::::T:::::S::::K:::::: Hmu2646 :S:::::QE:::::::::::::::::::::::::A::DQ:::T::::::::::K:::::: consensus PSGFISRLLGMGDLKQLSERVERAMEETQE-EEEDWDPEDMMKGEFTLKDMRKQMEAMNR #oth .21...........1..1.......2.1121312..2..1213.3...1..22..31.12 VNG2459 :DS::::::::::::::T:::::::::::D:DD:::::::L:::::::H::::::Q::DN NP0096A :::::::::::::::::::::::::::::A:-::::::::L:::::::::::N::N:::K hla0043 :::::::::::::::::::::::::A:A::::D::::::::LQ::::::::KR::D:::: HQ3418A :N:::::::::::::::::::::::A:::::ADD::::::I:E:S:::::::::::::D: HVO_0123 :N:::::::::::::::::::::::S:::A::D::::::E::::N::::::Q::::::DK Hbo1373 :N:::::::::::::::::::::::A:::::::D::::::I:::S::::::Q:::::::: Hut1962 ::::::::::::::Q::T:::::::::::A:::G::G::::LD::::::::::::::::K rrnAC3124 :::::::::::::::::T::::::::::::GD:::::::::LE:Q::::::::::QT::N Hmu2646 :::::::::::::::::T::::::::::G::::G::E:::::E:S::::::::::::::N consensus MGPLDQVMDMIPGLGGGLMDQLPDDAMDVTQERMRDFEVIMDSMTEAELENPRVVGASRT #oth .......1.....2...31.1.......1.12.113.11.....111.112..51.2.12 VNG2459 :::::::::::::M::::::E::::::::::::::G::::::::::::MAD::S::::QI NP0096A :::::::::::::::::IK:::::::::M::::L::::::::::S::::::::AI:Q:QI hla0043 :::::::::::::M:::M:::::::::::::D:::R::R::::::DE:::Q:::::Q::: HQ3418A ::::::::::::::::::K::::::::::::N:::::D::::::::::::D::S:::::V HVO_0123 :::::::L:::::F:::IK:::::::::::KD:::S::::::::::E::::::K:::::V Hbo1373 :::::::L:::::::::FK::::::::::::D:::S:D:::::::::::::::TI::::V Hut1962 :::::::::::::::::M:::::::::::::::::::::::::::::::::::QI:R::: rrnAC3124 ::::::::::::::::::::::::::::::::::Q::D::::::::E:::::::::Q::: Hmu2646 ::::::::::::::::::::::::::::::::::::::::::::::E:::::::::Q::: consensus RRIARGSGKDEETVRELLEQHKMMEQTIKQFQGMGDGDMQRMMKKMQQQGG-----GGGG #oth 2..11...21111111..2..21.31123...1..11..1...211222..11111.31. VNG2459 ::::::::QP:DR:::::D:::::A::MQ::::::::::::::S:::::::::::::::: NP0096A E:::::::T::D::::::::::::SRMM::::::::::::::::Q:::G::::::::::: hla0043 E:::::::T::::::Q:::::S::::::S::::::E::::::::::---::::::::E:: HQ3418A ::::::::T:::::::::Q::::::R:::::::::E::::::::::::::::::::::M: HVO_0123 ::::Q:::Q::::IQ::::::R::::::::::N::::::::::::L:N:::::::::::: Hbo1373 ::::::::::::::Q::::::::::R:::::::::::::::::::L:N:::::::::::: Hut1962 E::::::::PKDRI::::::::::DR:LN:::::::A::E::::Q:E--::DMGDM:DM: rrnAC3124 K::C:::::P::R:::::Q:::Q:::ML:::::::::::E::::Q:::-::::::::::: Hmu2646 E::::::::P::RI::::Q:::Q:D:MLN::::::E:::E:::QQ::::::::::::P:: consensus GMGGM-GGG-GPFG- #oth .3.122111321.11 VNG2459 :F::::---:--:-: NP0096A :G::L:-::M::::D hla0043 :L:D:M:::K:::-: HQ3418A :L::-::::L::::: HVO_0123 ::::L:-::M:::-: Hbo1373 :L::::---:::::D Hut1962 :::::G::::N::-: rrnAC3124 :::::G:::M::::D Hmu2646 :::::G::::::::D