|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1474 | NP2144A | hla1909 | VNG1030 | HQ3362A | HVO_1297 | Hbo0245 | Hut1056 | rrnAC0532 | Hmu1489 |
1080 | NP2144A | 1530 | 880 | 919 | 928 | 978 | 969 | 912 | 982 | 984 |
1093 | hla1909 | 880 | 1460 | 952 | 997 | 1006 | 1003 | 872 | 912 | 936 |
1104 | VNG1030 | 919 | 952 | 1451 | 935 | 930 | 963 | 902 | 948 | 966 |
1146 | HQ3362A | 928 | 997 | 935 | 1520 | 1077 | 1082 | 868 | 927 | 990 |
1156 | HVO_1297 | 978 | 1006 | 930 | 1077 | 1489 | 1141 | 933 | 963 | 991 |
1175 | Hbo0245 | 969 | 1003 | 963 | 1082 | 1141 | 1495 | 930 | 917 | 1001 |
1054 | Hut1056 | 912 | 872 | 902 | 868 | 933 | 930 | 1575 | 993 | 1066 |
1103 | rrnAC0532 | 982 | 912 | 948 | 927 | 963 | 917 | 993 | 1468 | 1135 |
1213 | Hmu1489 | 984 | 936 | 966 | 990 | 991 | 1001 | 1066 | 1135 | 1469 |
226 symbols consensus MTLDQYRPLADRLLGPFVAAADRLGLSPNGVSVIAFGFAVAAGGAFYLAG---------P #oth ....12.321212.4.1.512343.21.131.13.122.32.121143143111111132 NP2144A ::::KL::V:E:V:N::::::::V::T:D:::::::::::::AA:YTA::TAVVGVGPD: hla1909 :::::::SV:::::::W:R::AKI::::DQ:::L:::V::::A:::AVGE:::::::::: VNG1030 :::::F::::N:::D:W:R::KTV:AT::T:::A:::L::V:AA:::VGT:::::::::: HQ3362A :::::::AV:::::D:::DVV::::V::::::L:::::::G:::::GI:T:::::::::A HVO_1297 :::::::DT::K::A:::SV::AV:::::::::V:::::::::V::G::D:::::::::: Hbo0245 :::::::SV:N:::E:::G:::::::::D::::V:::::L:::V::::G::::::::::T Hut1056 :::::L:::S::::A:::::SV::::T::FI::L:LLV:GG:A:::::G:S:::::::E: rrnAC0532 ::::KF::::::A:::::S::KVA::::::::::::LL:LG:::VYAV:AR:::::::E: Hmu1489 :::::F::::::A:::::TV:K:::V:::::::V::AL:A::::::F:::T:::::::R: consensus ALYALGAVCVFLNGWLDLVDGALARELGVASEGGDLLDHVLDRYADIVVLVGLAAGIDAY #oth 54.321122.15...1..1..11..33322.31.......1.....23323.211.3332 NP2144A :::L:::LF:LG:::M::L::::::RQ:TD:KA::::::::::::::::VA:::::AES: hla1909 VF:LV::L::L::::::::::::::H:E:S:D:::::::::::::::A:IA:FTV::ES: VNG1030 :A::V::::::F::::::L:::::::V:T:::A:::::::::::::V::VT:A:::V::F HQ3362A TT:V:::::::W::::::::::::::R::S:::::::::::::::::AM:I:::::S::: HVO_1297 LW:G::::F::C::::::::::::::Q::S:KA:::::::::::::::::::::::::SF Hbo0245 MW::::GLF::::::::::::::::AQ:I::::::::::::::::::AM::::::::::: Hut1056 VW:VGA:GL::A::::::L::GI:::::TD:SA:::::::F:::::LLL:::::::::RW rrnAC0532 L::LG:::L::::::::::::::::::N:::S:::::::::::::::GII::::::VSQW Hmu1489 R:::V:::L::A:::::::::::::::S:::S::::::::::::::::M::::::::GR: consensus ALGLAAVTGVLMTSYLGTQAQAVGLDRVYGGLLGRADRLALIGIVGAVAAVY-----PRP #oth 4..32.1....1...1...1...111.2....1.......12.342431.4411111253 NP2144A L:::L:::::::::::::::::::::::::::V:::::::V::::T:I::G:::::::E: hla1909 :::F:::::::::::M:::I::::IG:E:::::::::::::M::::V::::::::::SA: VNG1030 G::::::::::L:::::::::::::::::::::::::::::V:VTAG:::IT::::::T- HQ3362A :::FV::::::::::::::I:::::G:E::::V:::::::::::T:VL:::TTLPTV::Y HVO_1297 :::::::::::::::::::I:::::G:A::::V::::::::M:L::LAS:::::::::DA Hbo0245 G::::::::::::::::::I:::::G:A::::V::::::::::LFAF:::AA:::::::: Hut1056 D::V::I::::::::::::::::::::::::::::::::::M:FGALL:::V:::::TD: rrnAC0532 E::I:::::::::::::::::::::::::::::::::::::V:V:TG:::FV::::::NA Hmu1489 D::::::::::::::::::::::D:::::::::::::::::::VA::::::L:::::T:: consensus -VAGLSVVGWLLVVFAVVGHLTALQRFYGAWRDLA----------- #oth 1262122222..221.21..2..3...341122.411111111111 NP2144A :LWT::L:E::::FL:::::::::::::HSM:A:S::::::::::: hla1909 I::::N:::L::AL::A::::::V:::L:::S::-::::::::::: VNG1030 ::::Y:P:VA:::::::::::::I:::VS:::Q::::::::::::: HQ3362A :YLD::::::::LF::I::::::I::::R::S::-::::::::::: HVO_1297 ::G::TLA:::::F:::::::::V:::W:::G::T::::::::::: Hbo0245 ::F:::P:::::AL:::I::F::::::W:::S::S::::::::::: Hut1056 ::S::::I::::::::::::::::::::Y:MG:::GNGSDPGEEST rrnAC0532 :L:::TL:::::::::::::V::A::::H:M:A:D::::::::::: Hmu1489 ::Q::T::::::::::::::::::::::Y:M:A:D:::::::::::