|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1694 | hla2215 | HQ2676A | HVO_1536 | Hbo0009 | VNG0718 | NP1738A | Hut1856 | rrnAC1620 | Hmu2056 |
1121 | hla2215 | 1797 | 1011 | 1071 | 1029 | 773 | 816 | 839 | 764 | 804 |
1197 | HQ2676A | 1011 | 1754 | 1156 | 1223 | 782 | 791 | 869 | 793 | 823 |
1253 | HVO_1536 | 1071 | 1156 | 1712 | 1273 | 751 | 888 | 896 | 830 | 844 |
1244 | Hbo0009 | 1029 | 1223 | 1273 | 1700 | 747 | 858 | 879 | 830 | 839 |
1021 | VNG0718 | 773 | 782 | 751 | 747 | 1688 | 925 | 889 | 851 | 904 |
1085 | NP1738A | 816 | 791 | 888 | 858 | 925 | 1712 | 940 | 906 | 947 |
1190 | Hut1856 | 839 | 869 | 896 | 879 | 889 | 940 | 1756 | 986 | 969 |
1069 | rrnAC1620 | 764 | 793 | 830 | 830 | 851 | 906 | 986 | 1709 | 1074 |
1119 | Hmu2056 | 804 | 823 | 844 | 839 | 904 | 947 | 969 | 1074 | 1714 |
245 symbols consensus ------------MDSMVPPLVLDIDGTLTDADGRLDPRVFDVLREWDAPVVLATGKAFPY #oth 111111112233446531..22.1....13334321212543134.122112....22.1 hla2215 MRERKTVARRHLTSD:::::A::::::::T:S::::A:::EL:PD::::::::::::::: HQ2676A ::::::::MYTDA:AT:::::::::::::::P:::::::PVY:QS::::I::::::S::: HVO_1536 ::::::::::::---::::::::::::::::::H::::A:E::PA:::::I::::::::: Hbo0009 :::::::::::::A:D::::::::::::::EP::::::A::::PS:::::::::::S::: VNG0718 ::::::::::::::TAD:::AV::::::SR::RSI:G::L::::G::G:::V:::::L:: NP1738A ::::::::::::---::A::AV:::::::RP:KSI::::::AI:A::DH::I::::S::: Hut1856 ::::::::::MAESGSA::::T:V::::::DEL:::::MGTA:::::G::::::::VL:F rrnAC1620 :::::::::::::::DT:::IV::::::::ESRA:::H:IP:::::P:R::I:::::M:F Hmu2056 ::::::::::::-MQET::::V:V:::::GP:QAVA::AMT::A::P::::V:::::::F consensus PVALCHFLGIERTVIAENGGVVLVD--DELTYTGDREAAQAVADAFVARGGDLGWGAADL #oth 112.1312.3343.1.....1331333212657..51225122331222.222.1164.3 hla2215 ::::A::::RAE::::::::::H::::G:TAIL::A::PR::VE::RE::::P::::R:T HQ2676A :::::::::::Q:::::::::I:A:::ETVS:Q::S:R:::A:SV:EE:::E::::GF:D HVO_1536 ::S:::Y::LPQ:::::::::::A:::G:V:F:::::::::A::E::::::::::D:::T Hbo0009 ::S:::Y::L::N:V::::::::AN::G:V:::::K:R::::::E:::::::::::SF:D VNG0718 A::::Q:A::DER::::::::AY:G:::::LHF::SR:VEQ::A::EDA:H:I:::D::: NP1738A ::G::E:::MPLN:::::::A:Y:EPAG:VV:N::P:G:A:::EEY::A:Y::::::V:M Hut1856 :I::ANY::::::::::::::TF::AT:::GVH::::::::::::Y:DA:Y:::::P::: rrnAC1620 :I:::E:::LD:::V:::::::F:EAT:::RLE::H:::L::GESYRDL:H:::F:QI:: Hmu2056 :::::Q:V:::PC:::::::::F:GES:::VFG::P::VD:FVA:YRE::HS::::NV:: consensus ANRWRETEIAVSLDQPEELLRELAAEHG--LEVIDTGYAYHVKSPGVDKGTGLEAVAETL #oth 3.2.....22231411232.422.33421124.2..11...2133213.16113212341 hla2215 V:::::::V:L:::AD:A::::V::AA:GDV::V::::::::::T::S::R:::R:GDA: HQ2676A V:K::::::::D:SAD::::::V:::FD:::T:::::::::L:T:::E::D::K::C::: HVO_1536 :::::::::IAR:NAD:A:::AV:D:FD::V::::::F:::I:T:::E::V:::R:C::M Hbo0009 T:Y::::::::::AAD:K::::V:T:YE::MD:::::::::::T:::E::I:FKRLC::: VNG0718 T:::::::L:::RE::LDV:SA:::D:::::H:V:::F:::::PESMS::NA:P:::AR: NP1738A V:::::::L::DR:::L:P:VAI:DD::::MD:V:::::::::DA::::A::::T:::L: Hut1856 P:::::::VIAAR:::L:P::D:::::::::::V::Q::::::::SMT::K:::T::DA: rrnAC1620 ::::::::LV::::::L:P:E::::AR::::V:L:::F::::TD:V::::::::::CSE: Hmu2056 ::::::::::::::::R:P:D:::ET:::::T:::::::::::::::::::::R::::E: consensus GYDPDEFVAVGDSENDVSTFEVAGESYAVANADDAAKAAADRVLDASYADGFLEALDRIR #oth 345152.2.1...4..2321421.323..1...33.431.1522343231.113112343 hla2215 :IG::::::I::::::::::A::::::::::::G::RE:::I:VAD::M::TAGV:ADL: HQ2676A EL:::S:::I::::::::::A:::R::::G::::::QR:::EI:EN::F::TASV::::E HVO_1536 D:::ED:::::::V::A:::R:::R:::::::::V::E:::T:::R::M::T:SV::SL: Hbo0009 SM:::::::::::T::T:::G:V:Q::::::::E:::::::E::S:::M::T:SV:ES:Q VNG0718 :VTAGD:::::::A:::EL::AV::::::G::::H::G::ET::SETHG::::A:V:::: NP1738A :VV:SS:I:I::::::AELL:L::TGF::::::AH:RG:::A:T:::F::::::::::A: Hut1856 ::E:T::::::::T:::::::A::TAI:::::::::L::::H:T::EF::::::::::VD rrnAC1620 DL::A::L:::::V::AQM:DL:::AV::::::ET:LER::::T::::G::::::VAPY: Hmu2056 ::A:GD:L:::::I:::A:::L::::V::::::EH:A:::::RT::R::A:::::VEPY: consensus D---- #oth 55442 hla2215 TRTE: HQ2676A SSETS HVO_1536 EEDAA Hbo0009 E:::: VNG0718 S:::: NP1738A :NR:: Hut1856 AGEW: rrnAC1620 ::::: Hmu2056 -::::