|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1822 | HQ2467A | hla1875 | HVO_2906 | Hbo2685 | VNG1347 | NP3772A | Hmu1086 | rrnAC0018 | Hut0313 |
1278 | HQ2467A | 2477 | 1207 | 1213 | 1275 | 1114 | 964 | 1089 | 973 | 1039 |
1239 | hla1875 | 1207 | 2227 | 1194 | 1319 | 1053 | 966 | 1036 | 995 | 1103 |
1334 | HVO_2906 | 1213 | 1194 | 2083 | 1350 | 1083 | 1025 | 1037 | 1007 | 1085 |
1369 | Hbo2685 | 1275 | 1319 | 1350 | 1908 | 1166 | 1040 | 1112 | 1074 | 1170 |
1374 | VNG1347 | 1114 | 1053 | 1083 | 1166 | 1914 | 1042 | 1188 | 1055 | 1086 |
1321 | NP3772A | 964 | 966 | 1025 | 1040 | 1042 | 2010 | 1211 | 1240 | 1204 |
1408 | Hmu1086 | 1089 | 1036 | 1037 | 1112 | 1188 | 1211 | 1819 | 1269 | 1308 |
1344 | rrnAC0018 | 973 | 995 | 1007 | 1074 | 1055 | 1240 | 1269 | 1827 | 1284 |
1416 | Hut0313 | 1039 | 1103 | 1085 | 1170 | 1086 | 1204 | 1308 | 1284 | 1785 |
363 symbols consensus -----------------------------------MSNPVVAVVDAETPGNVGTIARAMK #oth 1111111122122222222221133322132444455432.11.211.1..1.....1.. HQ2467A :::::::::::::::::::::::::::::::MPEAAH:F::V::EP:::::I:::::::: hla1875 MSGVDEGDETDRTEDPTHAGTDADAGANTDPDPQTRRK:::V::EP:::::::::::::: HVO_2906 ::::::::MSDDPDADVVDVADAADTANTATGDAGDREF::V::EP:::::::::::::: Hbo2685 ::::::::::::::::::::::::::::::::MPRH:K:::V::EP:::::::::::::: VNG1347 :::::::::::::::::::::::MTWTSTPTTRPA::K:A::I:::::A::::::::::: NP3772A ::::::::::::::::::::::::::::::::::::P:IA::::G::::::::::::S:: Hmu1086 :::::::::::::::::::::::::::::::::::::SVA:::::::::::::::::S:: rrnAC0018 :::::::::::::::::::::::::::::::::::--MIS:::::::::::::::::S:: Hut0313 :::::::::::::::::::::::::::::::::::-M:VS::::::Q::::::::::::: consensus NFGLSELLLVDPPELDPDGEAYGFAGHAREDVLPNAREVTFDEIVEEYHTVGTTAITNED #oth ...241.3.11..314321....1..1..1.11.2.3232123214311.112..213.. HQ2467A ::::T::::::::PIPAGS:::::::::::::::::KT:S::AV:NK:::I::::::A:: hla1875 :::::D:K:::::::KE:::::::::::::::::::D::::::::AN::::::::::G:: HVO_2906 :::IYD:R:::::P::::::::::::::::::::::T:T:LE:V:::F:::::::VSH:: Hbo2685 ::::TD:K::N::P:E::::::::::::::::::::D::::::V:::::::A:::::::: VNG1347 :::FE::::::::Y:GR:S::::::::::::I::E:::LS::AL:S:F::::F::::::: NP3772A :::::::Y::::::::::::::::::::::::::::T::E:SYLT:QFY::AC::T:::: Hmu1086 ::::D::::I:::D:PRES::::Y::Q::::I::E:::IS:::L:T::::::C::::::: rrnAC0018 ::::::::::::::::::::::::::Q::D:I:::::T::::D:::N::::AC::T:::: Hut0313 :::::D:K:::::::::::::::Y::Q::D:IM:S:DV:::E:::NN::::A:::::::: consensus ATKHVRYPFKTPAELADSLKGVEADTALVFGRERVGLTNDELARLDEVCSIPASDDYPVL #oth 444.2.1.241.222312.432133212.....22..3.1.1342.3111...233...1 HQ2467A SRH:::F:Y:::::IS:D::T::TE::::::::GT:::::::TS:::::::::NES:::: hla1875 DQS:E:F:::::V::RE:::T:D:P::I:::::GR::N:E::SQ:::::::::D:::::: HVO_2906 S:R:::::::::V:I::::ES::TK::::::::GT::D:E:::M:::::C:::D:R:::: Hbo2685 SR::::F:Y:::V:VRE::ET::TK::::::::GR::N:::::::::I:::::::::::: VNG1347 ::S:T:F::R:::::G:::RD:::P:::::::::::::::::::I:::G::::::::::M NP3772A :::::::::IE::A:S:E:A:LD::VCI:::::::::::::::Q::RI:::::DG::::: Hmu1086 GS:::::::V::RD:::D:A:LD::::I:::::::::::::IE:::Q:::::::EE:::: rrnAC0018 PAN:::::AT:::D:::::QD::G:ICV:::::::::S::::::::VI::::::AS:::: Hut0313 :::::::::V::R::GEE:::IDS:VC::::::D:::S:E:::EV:QI:::::::::::: consensus NLGQAATILLYELRSLTVEETQLPDVERERADEPEIEGLHEFFDEFLDAVDHPEEKRAKT #oth ..1.1..221....411231..1.243331.523211321251552.34323121125.2 HQ2467A :::::::V:::::::::LTD:::::::::::::SD:DRFY:::TD::HS:EGR:H::E:: hla1875 :::::::V::::::D:::D::::::TAVT::P::DV:RF::::GD::E:TGQR:HH:D:N HVO_2906 :::::::L:M::::RF:::::::::::::::S:A:::VVYR::::L:::::YR:H::T:: Hbo2685 :::::::::M::::::::D::::::::::::T:S:::RFYDN:EN::EHAE:RDH::P:: VNG1347 ::::S::VA:::::D:AMS:::::::::H::::A:::QFY:HAS:::::::Y:A::Q::: NP3772A ::A:::::V:::::E:::::::H:KQAH:::::H:::::::T:S:Y:HE:G:::::IP:: Hmu1086 ::::::::V::::::::::D:::::PTHD::AQ::::::::Q:AG::::I:::::::::: rrnAC0018 ::::::::V:::::E:::D:::H:EQLHTL:ET:AV:::::E::R::G:IG:::::QH:A Hut0313 ::::::::V:::::A:::::::::EIT-D:::Q:A:::::DQ:GS::EVI:::::::::A consensus ARLFRRLIGRAHPTGREIRTLRGLFRRA-------------------------------- #oth 51141.221.12..3..36113.21.2222222222111111111111111111111111 HQ2467A :LML::::A:::::N:::S::L::::::NILLGEQSYGESNQTDEMDDTTAVESIPEESI hla1875 :L:V:::L::::::E:::HS:L:T::K::::::::::::::::::::::::::::::::: HVO_2906 S:MM:::L::::::E::AA::T:V:::::::::::::::::::::::::::::::::::: Hbo2685 M:MI::::::::::D::VH::T:::::::::::::::::::::::::::::::::::::: VNG1347 M:ML::ML::T:::::::N:VH::L::::::::::::::::::::::::::::::::::: NP3772A E::::::A:::S:::::A:::::VL::GALVASGEI:::::::::::::::::::::::: Hmu1086 R:::Q::::::::::::TT:::::::Q::::::::::::::::::::::::::::::::: rrnAC0018 R:::::VL:::Q:::::TK:::::::Q::::::::::::::::::::::::::::::::: Hut0313 G:::::V::::::::::V:::::::::V:::::::::::::::::::::::::::::::: consensus --------------------------------------------------EQDLER-EDD #oth 111111111111111111111111111111111111123333333324437535345542 HQ2467A NAIIESTSSGYEETEAQTSSDGSLCDQSDSADLMNADEDTEMTAGADVDTDT:V:TNTNN hla1875 ::::::::::::::::::::::::::::::::::::::NVKLEHADHLAAKY:EPVYPRE HVO_2906 :::::::::::::::::::::::::::::::::::::::::::::::AEAVR:PD:FR:: Hbo2685 ::::::::::::::::::::::::::::::::::::::::::::::::::TNRFD:Y::E VNG1347 :::::::::::::::::::::::::::::::::::::::::::::::::::TQ:P-:::: NP3772A :::::::::::::::::::::::::::::::::::::PRPGTSDPGDEPNQK:ESNR:NE Hmu1086 ::::::::::::::::::::::::::::::::::::::::::::::::::S:R:S-:DEE rrnAC0018 ::::::::::::::::::::::::::::::::::::::::::::::::::R:RI::A::: Hut0313 ::::::::::::::::::::::::::::::::::::::::::::::::::::K::-:--: consensus --- #oth 332 HQ2467A DNT hla1875 ::: HVO_2906 ES: Hbo2685 TRD VNG1347 ::: NP3772A ::: Hmu1086 ::: rrnAC0018 ::: Hut0313 :::