| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4443 | HVO_A0269 | Hut2172 | hla2211 | HVO_1538 | Hbo0007 | VNG1969 | HQ1734A | rrnAC0554 | Hmu1344 |
| 3003 | HVO_A0269 | 4355 | 2625 | 2813 | 2845 | 2844 | 2670 | 2758 | 2754 | 2718 |
| 3541 | Hut2172 | 2625 | 4474 | 3155 | 3226 | 3122 | 3141 | 3172 | 3279 | 3188 |
| 3672 | hla2211 | 2813 | 3155 | 4755 | 3389 | 3419 | 3235 | 3277 | 3347 | 3263 |
| 3758 | HVO_1538 | 2845 | 3226 | 3389 | 4511 | 3719 | 3193 | 3295 | 3474 | 3336 |
| 3661 | Hbo0007 | 2844 | 3122 | 3419 | 3719 | 4589 | 3098 | 3284 | 3442 | 3259 |
| 3580 | VNG1969 | 2670 | 3141 | 3235 | 3193 | 3098 | 4389 | 3392 | 3488 | 3336 |
| 3747 | HQ1734A | 2758 | 3172 | 3277 | 3295 | 3284 | 3392 | 4458 | 3593 | 3418 |
| 3892 | rrnAC0554 | 2754 | 3279 | 3347 | 3474 | 3442 | 3488 | 3593 | 4455 | 3665 |
| 3731 | Hmu1344 | 2718 | 3188 | 3263 | 3336 | 3259 | 3336 | 3418 | 3665 | 4404 |
627 symbols consensus ----------------------------MAQTPHVVVIGGGSTGAGIARDLAMRGLDVTL #oth 111111111111111111111111111116653412.1...1..3.21..1.1..3211. HVO_A0269 ::::::::::::::::::::::::::::--MSYS:::::::A::T:T::::::::F:::: Hut2172 ::::::::::::::::::::::::::::------:L::::::::V:::::A::::F:::: hla2211 LYYLNIPDCYEWHPPGGKVKWAESDQID:D:QVD:::V::::::C:VV::::R::V:AV: HVO_1538 :::::::::::::::::::::::::::::KKS:S:L::::::::T::::::::::::::: Hbo0007 :::::::::::::::::::::::::::::TE::S:L::::::::C::V:::::::::::: VNG1969 :::::::::::::::::::::::::::::::E:::::V::::::::V:::::::::G::: HQ1734A :::::::::::::::::::::::::::::VSK::I:::::::::T::V:::::::VE::: rrnAC0554 :::::::::::::::::::::::::::::GP:::IA:::::::::::::::::::::::: Hmu1344 ::::::::::::::::::::::::::::::S::RI::V::::::::V::::::::A:::: consensus VEQGNLTHGTTGRMHGLLHSGGRYAVSDQASARECIEENRVLRDIAGHCVEMTGGLFVKR #oth 1.2....1.....1..1....1....1.13..31.14..11.22..2..112...1..11 HVO_A0269 ::R::::E:::::T::H::::A::::::KE::VD:MR:::::HR:::::I:D::::::QL Hut2172 ::K:::::::::::::::::::::::::::::::::D::MI:::::T::::D:::::::: hla2211 ::K::::::::::::::::::::::::::K:::::::::::::::::::::E:::::::: HVO_1538 ::K::::::::::::::::::::::::::P::K::::::::::R::::::::::::::Q: Hbo0007 ::K::::::::::::::::::::::::::P::T::::::::::R::S:::::::::::Q: VNG1969 ::::::::::::::::::::::::::::::::::::I::::::E::T:::DE:::::::: HQ1734A L:::::::::::::::::::::::::A:::::K::ML:::::Q:::T::::::::::::: rrnAC0554 ::::::::::::::::::::::::::::::::T:::::::::::::S::::::::::::: Hmu1344 :::::::::::::::::::::::::::::K::::::::::::::::S::::::::M:::: consensus PEDSEEYFQEKLEGCRECDIPAEVLSGEEARRREPHLARDIDKAISVPDGAIDPFRLCVA #oth 11.113.112..4.132.2..22222111..35..2.151121..51..1.1.....1.. HVO_A0269 EG::DD::ER::A::A:::::T::I::::::::::Y:TDAVER::W:::::V:::::::: Hut2172 :::T:::Y::::D:L:::S:::TE:TA:::::K::F:::::::::E:::A:::::::::: hla2211 ::::::::::::::::A::::V:MID:::::::::Y::::VE:::AL::A:V:::::::: HVO_1538 ::::D:::EK::::::::G:::::::A::::EI::Y::K::KR::K:::::V:::::::: Hbo0007 ::::DD::E:::::::::G:::::::A::::EM::Y::E::KR::R:::::::::::::: VNG1969 :::::Q::::::A::EA::::TK::::A:::QL:::::D:VE:::W:::A:::::::V:: HQ1734A :::::::::K::Q::H:::::::::TA::::AV:::::G::::::::::::::::::V:: rrnAC0554 :::::::::K::N::E::G:::::V::::::AM:::::K::::::::::::::::::V:: Hmu1344 :::::S::E:::Q::AD:::::::I:::R::E::::::T:V::::::::::V:::::V:: consensus NAASAQEHGARIETHSEVTDLLVEDGEVVGVEVEHDSGPGKRVHGEEGGTEEIRADHVVN #oth ..11.52.1..1..123.1.111.21211.2.121442526321144152.522111111 HVO_A0269 :::::V:::::::::A::V::V::G:R:A::::KRQ-::NHHSE:AA:D::TFE::Y::S Hut2172 ::I::AN:::::::F::::::::::::I::A::T:E::E:N::::V::SV::::V::I:: hla2211 :::D:R:::::::::AP:::V::::::I::::I::ET:::::::R:P:T::::::R:::: HVO_1538 :::::V::::::::::::::V:::G::::::::T:QT:T:PY::::P:EV::::::Y::: Hbo0007 :::D:ID::::V:::A::V:V:I::::::::::::GEADLGIAE::P:TR:KLY::Y::: VNG1969 ::::::::::::::::T:::VV::::A::::::::AT:A::::::T:::::V:::::::: HQ1734A :::D:K::D:::::::T:::::I::DA::::::K::::T:E::::MT:V::R:Y::::I: rrnAC0554 :::::::::::::::TK:::::::S:::::I::::::::::::::T:::::Q::::Y::: Hmu1344 ::::::::::::::::K:::::::S::I:::::::GAKS:D::::VQS:R:T:::::::: consensus ATGAWAGRIGDMAGVDVEVRPSKGVMTIMNTRQVDTVINRCRPKGDADIVVPHETTAILG #oth .1...1.42121.12121111...1.111.2..1...11112...11.111....121.. HVO_A0269 :::::::QLAA:::::L:MAI:::A:VVT:V::L:::::::L:::EG:TII:::::VL:: Hut2172 :A:::T:E:AA::DI:::::::::::::::V::::::::::Q:::::::::::::::::: hla2211 :::::::NV:E::::::::::::::::V:::::::::::::::::::::I:::::AC::: HVO_1538 :::::::Q:::F:::N:::::::::::::::::::::V:::::::::::I::::::C::: Hbo0007 :::::::Q:::::::::A::::::::::::V::::::V::::::::::::::::::C::: VNG1969 :A::::::L:E::::::::::::::::V:::::::::VVNG:::::::::::::::C::: HQ1734A :::::::H::E:::::IA:::::::::V:::::::::::::::::::::::::::::::: rrnAC0554 ::::::::::::::L:I:::::::::::::I::::::::::::::::::::::::::::: Hmu1344 :::::::::::::DL::A::::::::::::V::::::::::::::::::I:::::::::: consensus TTDEEVDDPEDYPEEQWEVDLMIDTLSELVPMLADARTIRSFWGVRPLYEPPDTGTDDPT #oth 11.21.3..1....22....21.1211111.2141..22.11.......1.132212..1 HVO_A0269 AN:DP::::D::::::::::M:::IA::M::VV::::M::AY:::::::D:NPKS:T::G Hut2172 ::::::G::::::::E:::::::EE:AK:::I:D:::::::::::::::::::::::::: hla2211 :::::::::::::::E:::::::E:::::::::K::::L:::::::::::::G:::E::: HVO_1538 ::::::E::::::::G:::::::E::::::::::::::::::::::::::::G:::E::: Hbo0007 :::::::::::::::G:::::::::::::::::SE:::::::::::::::::G:::E::: VNG1969 ::::::A:::::::Q:::::MV::E:A::I:::D::::V::::::::::::::VDS:::: HQ1734A :::V::::::::::K::::::::::::::::::T::::::::::::::::::EV:S:::: rrnAC0554 ::::::E:::::::::::::M::::::::I:::DE::::::::::::::::::V:S:::: Hmu1344 ::::::E:::::::::::::Q::E:::::::::::::S::::::::::::::EV:SE::: consensus DITRDFFLLDHAERDDLPGMTSIVGGKLTTYRMMAEQISDHVCEKLGVDADCRTADEPLP #oth .1..21.1.1.41..312.2211....1....2.1.323..2233213223.1.1121.. HVO_A0269 :V::NY:V:::::::GVA:FA:V:::::::::E:::SV::::::V:::EEP:::DEV::: Hut2172 ::::E::::::D:::A:::::T::::::::::L::::LV::LA::FD::TT::::E:::: hla2211 :::::Y:::::GD::::::::T::::::::::::::S::::::DA::H::T:D:::A::: HVO_1538 ::::E:::::::D:::::::::::::::::::::::::::::::::::::E::::::::: Hbo0007 ::::::::::::D:::::::S:::::::::::::::K::::::::V::E:E::::E:::: VNG1969 :::::Y:::A:DD::::::::T::::::::::::::E:T:::::R:::T:::::::VA:: HQ1734A :::::::::::Q:::N:H:L::::::::::::::::::T::I::RF:IEEP::::::::: rrnAC0554 :::::::::::D:::::::::::::::F::::::G:::A::::G:F:I:::::::::::: Hmu1344 :::::Y:::::E:::G:::::T:::::F::::::G:E:A:::VS:F:M::::::::V::: consensus GSEDFSVLDDYMDEFGLRSPIGRRSAQRLGSRADEVLDT-DEPNPVVCECEGVTRAEVQD #oth ..224422113.21.11...112..22...1.252..33323...12.3..1.....13. HVO_A0269 ::A:P:A::E:::::D:::::A:::G::::D::P::::I::::::TL::::A::::::R: Hut2172 ::::EG:I::A::D:::::::AK:::E:::::TQ::::::N:::::::G::A::::::N: hla2211 :::NPARM:EL:E:::::::VA:::G:::::::AD:::EY:-:::::::::::::::::: HVO_1538 :::::T::R::::D:::::::::::::::::::::::NSV:-:::::::::A:::::I:: Hbo0007 ::::::::R:W:::::I:::::::::::::::T:D::GEW:G:::::::::::::::IH: VNG1969 ::A:NTA:::::T:::::::VAQ::VD::::::GS::::::D:::TI:A::A:::::I:: HQ1734A ::N:IR:I::::::::::::::::::D:::::V::::::::::::TI::::::::::::: rrnAC0554 ::::::::R::::::::::::::::VE:::::::D::K:::G:::T::A::::::::I:: Hmu1344 :::E::::R::::::::::::::::VE::::::E:::G::G:::::L:N:::::::::R: consensus AIDQAGTDLNAVRIRTRASMGNCQGGFCSHRLANELHPE-YDEAVVRDAWDELYQERWKG #oth .2442.2...21.11...2......11.4..213..3431232621121311111...1. HVO_A0269 ::::V:A:::G::L::::::::::::::::::GA::Y:D:HGAE:A:::V:::::::::: Hut2172 ::E:S:::::::::::::G:::::::::::::::::::D:F::GRA:A:L:::::::::: hla2211 ::GE::S:::::::::::::::::::::T::I:A::AQ:::P:P:::::E:::::::::: HVO_1538 :L:T::::::S:::Q::::::::::AI:C::M::::A::::::KT::ASL:D:::::::: Hbo0007 :MNH:::::::::::::::::::::A:::::M::::VED:HS:L::::SL:::::::::: VNG1969 ::E:S:::::::::::::T:::::::::A::::::::TAG::D:T::AS::::LA:::R: HQ1734A ::S:S:S:::::::::::T:::::::I::::::::::TT::::S::I:::N:IL:::::: rrnAC0554 ::GGS:S::::::::::::::::::::::::M:S:::S:::::P:::E:::::L:::::: Hmu1344 ::S:::A:::GT::::::::::::::::I::::G::::::F:::T:::S::D:L:::::: consensus QRHALWGRQLSQAMLNYALHATTMNRDHDPAA-DADVDFGAFDSGPGQSGA--DG----- #oth 1...1..6..1.1113231..2.1.1151114435421141..3.445564644455433 HVO_A0269 :::::::E::::::::AM:::::::H:ANHV:G:ENIEYR:::G:R-----::--::::: Hut2172 ::::::::::::::IT:TM::L:::::R:::G:GGSL:::::::::SNTL:TD::QPAEG hla2211 :::::::M::::::::HL:::::::::G:::SLNSE:::::::A:E:G:E:DAIDGGDAG HVO_1538 E:::M::T::::TA:KHM:::A:::::E::::A:::I::A:::D:VASG::VA::GRERA Hbo0007 E::::::::::::::KHM:::::::::G::::S::::::::::A:T:AAAGETS:TGG:D VNG1969 :::::::D:::::::S:::::::Q::G::::DA:TEI::T:::A::-----::--::::: HQ1734A :::::::Q:::::::::::::::Q::::::::::SS:::TT::::EM::DSGTTAVS::: rrnAC0554 :::::::E:::::A:::::::::Q:::Q:::D:GEP:::S:::::R::T:GSV:SAD::: Hmu1344 :::::::N::Q:::I::::::::Q:::::::T:-QP:::A:::::::SDRR::--::::: consensus ---AATD--GGA---------DGD--- #oth 322324122115422222222423431 HVO_A0269 :::T:VP::E:S:::::::::H::::: Hut2172 PPGV:::::::GGMAVAMTRMSS-::: hla2211 T::::::::::I::::::::::::R:: HVO_1538 ADR:DD:AL:::::::::::::::N:: Hbo0007 TDR:::::::::PTDGSLAEVNDADS: VNG1969 :::L:A:::::P:::::::::E:AHGN HQ1734A :::V:::::::TQ:::::::::::RV: rrnAC0554 :::V:A:::::T:::::::::N:Y::: Hmu1344 :::LGS:TV:E:A::::::::::::::