|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3413 | hla1205 | VNG1149 | HQ2890A | HVO_2724 | Hbo2457 | Hut2754 | NP3698A | rrnAC0080 | Hmu1254 |
2992 | hla1205 | 3418 | 2543 | 2897 | 2902 | 2915 | 2858 | 2828 | 2868 | 2809 |
2718 | VNG1149 | 2543 | 3056 | 2571 | 2672 | 2657 | 2542 | 2570 | 2627 | 2661 |
3084 | HQ2890A | 2897 | 2571 | 3413 | 3158 | 3168 | 2880 | 2854 | 2934 | 2780 |
3249 | HVO_2724 | 2902 | 2672 | 3158 | 3413 | 3267 | 3000 | 2978 | 3064 | 2945 |
3226 | Hbo2457 | 2915 | 2657 | 3168 | 3267 | 3424 | 2978 | 2931 | 3030 | 2901 |
3125 | Hut2754 | 2858 | 2542 | 2880 | 3000 | 2978 | 3394 | 3050 | 3047 | 2937 |
3082 | NP3698A | 2828 | 2570 | 2854 | 2978 | 2931 | 3050 | 3397 | 3063 | 2908 |
3204 | rrnAC0080 | 2868 | 2627 | 2934 | 3064 | 3030 | 3047 | 3063 | 3497 | 3031 |
3088 | Hmu1254 | 2809 | 2661 | 2780 | 2945 | 2901 | 2937 | 2908 | 3031 | 3278 |
462 symbols consensus ------------MEIEIATIGGYEEVGRQMTAVRAGDDVVIFDMGLNLSKVLIHDNVETE #oth 111111111111112111121111211111111121222121111111121111111111 hla1205 :::::::::::::::::::L::::::::::::::::E:I::::::::::::::::::::: VNG1149 ::::::::::::------------------------------------------------ HQ2890A ::::::::::::::::::::::::::::::::::T:::I::::::::::Q:::::::::: HVO_2724 ::::::::::::::::::::::::::::::::::::::::V::::::::Q:::::::::: Hbo2457 ::::::::::::::::::::::::::::::::::::::::V::::::::Q:::::::::: Hut2754 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3698A ::::::::::::::V::::::::::::::::::::::N:::::::::::::::::::::: rrnAC0080 MPAAGFPLGATT::V:::::::::A::::::::::::::::::::::::::::::::::: Hmu1254 ::::::::::::-----------------:::::::::I::::::::::::::::::::: consensus RMHSLDLIDMGAIPDDRVMSDLEGDVKAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTI #oth 4................1..11....1............1111.........1111.1.. hla1205 S:::::::::::::::::::E:::::Q::::::::::::AG:P:::::::::::GS:Y:: VNG1149 -:::::::::::::::::::::::::::::::::::::::::::::::::::::GS:::: HQ2890A T::::::::::::::::I::::::::Q::::::::::::::L::::::::::::GS:::: HVO_2724 K:::::::::::::::::::::::::Q:::::::::::::::::::::::::V::::::: Hbo2457 K::::::::::::::::::::::::::::::::::::::::::::::::::::::S:::: Hut2754 ::::::::::::::::::::EI:::::::::::::::::::::::::::::::M:::::: NP3698A :::::::::::::::::::::I::::Q::::::::::::::::::::::::::::::::: rrnAC0080 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1254 ::::::::::::::::::::E:::::::::::::::::::::::::::::::V::::Y:: consensus ELVKQQIEGEEKFGVQNDLVKMEAGETMSIGDSG-VELEFVNVTHSIIDAINPVLHTPEG #oth ....11142.3..2.4...1..3..2213..13321.1...1....1.......2..... hla1205 :::::::AD:G::Q:D::::::K::G::A::::EQ::M:::::::::::::::::::::: VNG1149 ::::GE::S:Q::::E:::::::::G::E:::RC:-:::::H:::::::::::::::::: HQ2890A :::::::DS:N::N:N:::L::S:::A::::E::N::::::H::::::::::::I::::: HVO_2724 ::::::::::N::N:N::::::::::::::::::N::::::H::::::::::::V::::: Hbo2457 ::::::V:::N::N:G::::::::::M:::::::N::::::H:::::::::::::::::: Hut2754 :::::::Q:::::::E::::::D::A:T::::D::::::::::::::::::::::::::: NP3698A ::::::::::::::::::::::D::G::P::EKC:-:::::::::::::::::::::::: rrnAC0080 :::::::KS:::::::::::::D::::::::ERN:-:::::::::::::::::::::::: Hmu1254 :::::E:K:::::::::::::::::G::::::KN:-::::::::::V::::::::::::: consensus AVVYGLDKRMDHSPVLGDPIDMKRFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRH #oth 11.......2..3..21.....2......1221...1.........1..1.....3.121 hla1205 :::::::::L::T::I::::::D:::::::QD:::::::::::::::::::::::Y:KK: VNG1149 ::::::::::::D:::E:::::E:::::::::::::::::::::::K::::::::T:::: HQ2890A :I:::::::I::::::E::::::::::::::DN::::::::::::::::::::::H::S: HVO_2724 ::::::::::::::::E:::::::::::::::N:::A::::::::::::::::::::::: Hbo2457 :I::::::::::::::E:::::::::::::::N:::A:::::::::::::::::::::K: Hut2754 :I::::::::::D::V::::::D::::::E--::::::::::::::K:::::::::::K: NP3698A ::::::::::::N:::::::::D:::::::--::::::::::::::K::K::::::::SQ rrnAC0080 S::::::::::::::I::::::::::::::::::::::::::::::K::::::::::::: Hmu1254 S:::::::::::T::::::::::::::::::::::::::::::::::::::::::::::: consensus LKDVMTSVEDYDGGIVATTFSSHIARVKSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDF #oth 11.123.31..1...........11..111..1.31.1.1.1.......1...1...111 hla1205 VE:TL::M:::S::::::::::::::::T:::Y:RE:::::::::::::::::::::::: VNG1149 ::::L:::A:::::::::::::::S::S:::::::E:::E:I:::::::R:::::::MGR HQ2890A :E:TIR:I:::::::::::::::VS::S:::::::::D:::::::::::::::A::::G: HVO_2724 ::::::::::::::::::::::::S::S::::::::::::::::::::::::::::::G: Hbo2457 :E::IR:::::::::::::::::VS::S:I::::::::::::::::::::::::::::G: Hut2754 :::::Y:M::::::::::::::::::::::::::D::::::::::::::::::::::::: NP3698A :::::Y:L::::::::::::::::::::::::::E::::::::::::::::::::::::: rrnAC0080 :::::D::A:::::::::::::::::::::::::D::::::::::::::::::::::::: Hmu1254 :::::::I::::::::::::::::::::::::::DE:::::::::::::::::::::::: consensus VDFPDDLGMYGHRKSVDRTFKRIMKEGKENFLPIVTGHQGEPRAMLTRMGRGETPYELED #oth .2113.1..1........1...1.31..111..1........1......1..1..11112 hla1205 :::QG:V:::::::::::A:::::::::G::::::::::::::::::::::::::::I:N VNG1149 :N:::::::F::::::::A:::V:N:::::::::::::::::Q:::::::::::::DI:: HQ2890A ::L:::V:::::::::::::::::::::::Y::::::::::::::::::::::::F:::N HVO_2724 ::L:::::::::::::::::::::::::::Y::::::::::::::::::::::::::ID: Hbo2457 ::::::V::::::::::::::::::::::::::::::::::::::::::::::::::I:N Hut2754 :E::E:::::::::::::::::::S:::::::::::::::::::::::::::D::::::E NP3698A ::::S:::::::::::::::::::D::::DY::V:::::::::::::::A::::::::DE rrnAC0080 ::::E:::::::::::::::::::N:::::::::::::::::::::::::::::::::D: Hmu1254 ::::::::::::::::::::::::ND:::::::::::::::::::::::::::::::::: consensus GDKVIFSARVIPEPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYQMLDALQPQH #oth ...12...11....1.1.....1.3..2.....1..11......12....1.121.2.31 hla1205 ::::V:::SI::::::::::::::Q::R:::::L::::::::::::::::E::::::::: VNG1149 :::I::::S:::::::K:::::::Q::R:::::::::::::::::::::::::::::::: HQ2890A ::::::::::::::::::::::::::::::::::::E::::::::::::::::::::::: HVO_2724 :::::::::::::::::::::::::::R::::::::E:::::::::::::E::Q:::::: Hbo2457 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2754 ::::::::::::::::::::::::T:::::::::::EV::::::NR::::E::NT:E:E: NP3698A ::::::::::::::::::::::A:K::G::::::::::::::::NS:::::::Q::N:TN rrnAC0080 ::::L:::::::::::::::::::K::G::::::::::::::::::::::E:I:::::KN Hmu1254 ::::L:::::::::S:::::::::Q::::::::L:::::::::::::::::::Q:::::N consensus VIPAHQNLKGFAPYVDLAESQGYKLGRDLHVTRNGNMIQLVE #oth 2..1..313.31..13.1312..33.1.1.3.4..1412.21 hla1205 L:::::T:::RS::::::T:::::::::V:::Q::SV:::A: VNG1149 L:::::DM::M:::AK::K:::::I:::::M:E:::T::::: HQ2890A I:::::::E:LS:::::::::::A::::::::::::IV:::G HVO_2724 :::::::::::::::::::::::A:::::::::::::::::: Hbo2457 :::::::::::S:::::C:::::DM::::::::::::::::: Hut2754 I:::::SMG::::::E::::E::E::E:::::::::V:T::: NP3698A ::::::DM:::S:::E::SNE::E::::::::K:::T:::T: rrnAC0080 I:::::S:E::::::::::NM:::A:::::I:::::::K:T: Hmu1254 :::G::SMS::::::S::::::::::::::A:S:::R:T:::